RNA–Protein interactions for RNA: ENST00000396081.5

HERPUD2-202, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 3,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-202ENST00000396081 RASEFQ8IZ41 740 aa21.78■■□□□ 1.08
HERPUD2-202ENST00000396081 KIAA0232Q92628 1395 aa21.78■■□□□ 1.08
HERPUD2-202ENST00000396081 NUDT16Q96DE0 195 aaKnown RBP21.78■■□□□ 1.08
HERPUD2-202ENST00000396081 LIMCH1Q9UPQ0 1083 aa21.78■■□□□ 1.08
HERPUD2-202ENST00000396081 SPG7Q9UQ90 795 aa21.78■■□□□ 1.08
HERPUD2-202ENST00000396081 SNX14Q9Y5W7 946 aa21.78■■□□□ 1.08
HERPUD2-202ENST00000396081 PIK3C2BO00750 1634 aa21.77■■□□□ 1.08
HERPUD2-202ENST00000396081 NUTM2FA1L443 756 aa21.77■■□□□ 1.08
HERPUD2-202ENST00000396081 HSP90AB2PQ58FF8 381 aa21.77■■□□□ 1.08
HERPUD2-202ENST00000396081 RUFY3Q7L099 469 aa21.77■■□□□ 1.08
HERPUD2-202ENST00000396081 WASLO00401 505 aaPredicted RBP21.77■■□□□ 1.08
HERPUD2-202ENST00000396081 CWC27Q6UX04 472 aaKnown RBP21.77■■□□□ 1.08
HERPUD2-202ENST00000396081 CASTP20810 708 aaKnown RBP21.76■■□□□ 1.07
HERPUD2-202ENST00000396081 TXNDC2Q86VQ3 553 aa21.76■■□□□ 1.07
HERPUD2-202ENST00000396081 EDC4Q6P2E9 1401 aaKnown RBP21.76■■□□□ 1.07
HERPUD2-202ENST00000396081 SURF6O75683 361 aaKnown RBP21.76■■□□□ 1.07
HERPUD2-202ENST00000396081 CCDC192P0DO97 292 aa21.76■■□□□ 1.07
HERPUD2-202ENST00000396081 GJB2P29033 226 aa21.76■■□□□ 1.07
HERPUD2-202ENST00000396081 C16orf45Q96MC5 204 aaPredicted RBP21.76■■□□□ 1.07
HERPUD2-202ENST00000396081 LARGE1O95461 756 aa21.75■■□□□ 1.07
HERPUD2-202ENST00000396081 FLIIQ13045 1269 aa21.75■■□□□ 1.07
HERPUD2-202ENST00000396081 FERMT3Q86UX7 667 aa21.75■■□□□ 1.07
HERPUD2-202ENST00000396081 ATP7BP35670 1465 aa21.74■■□□□ 1.07
HERPUD2-202ENST00000396081 SSH2Q76I76 1423 aa21.74■■□□□ 1.07
HERPUD2-202ENST00000396081 FUCA2Q9BTY2 467 aa21.74■■□□□ 1.07
HERPUD2-202ENST00000396081 STAP2Q9UGK3 403 aa21.74■■□□□ 1.07
HERPUD2-202ENST00000396081 AATKQ6ZMQ8 1374 aa21.74■■□□□ 1.07
HERPUD2-202ENST00000396081 MLH3Q9UHC1 1453 aa21.74■■□□□ 1.07
HERPUD2-202ENST00000396081 TPM3P06753 285 aa21.74■■□□□ 1.07
HERPUD2-202ENST00000396081 LUZP1Q86V48 1076 aa21.74■■□□□ 1.07
HERPUD2-202ENST00000396081 CKAP2LQ8IYA6 745 aa21.73■■□□□ 1.07
HERPUD2-202ENST00000396081 UBTFL1P0CB47 393 aaPredicted RBP21.73■■□□□ 1.07
HERPUD2-202ENST00000396081 LRMPQ12912 555 aa21.73■■□□□ 1.07
HERPUD2-202ENST00000396081 ZNF771Q7L3S4 317 aaPredicted RBP21.73■■□□□ 1.07
HERPUD2-202ENST00000396081 CCDC186Q7Z3E2 898 aa21.73■■□□□ 1.07
HERPUD2-202ENST00000396081 RAD50Q92878 1312 aa21.72■■□□□ 1.07
HERPUD2-202ENST00000396081 FAM173BQ6P4H8 233 aa21.72■■□□□ 1.07
HERPUD2-202ENST00000396081 CCDC61Q9Y6R9 512 aa21.72■■□□□ 1.07
HERPUD2-202ENST00000396081 SGSM2O43147 1006 aa21.72■■□□□ 1.07
HERPUD2-202ENST00000396081 KIF20AO95235 890 aa21.71■■□□□ 1.07
HERPUD2-202ENST00000396081 TTC14Q96N46 770 aa21.71■■□□□ 1.07
HERPUD2-202ENST00000396081 NECAB1Q8N987 351 aa21.71■■□□□ 1.07
HERPUD2-202ENST00000396081 JAKMIP1Q96N16 626 aaKnown RBP21.71■■□□□ 1.07
HERPUD2-202ENST00000396081 MYO5BQ9ULV0 1848 aa21.71■■□□□ 1.07
HERPUD2-202ENST00000396081 MTMR6Q9Y217 621 aa21.71■■□□□ 1.07
HERPUD2-202ENST00000396081 ZNF592Q92610 1267 aa21.7■■□□□ 1.06
HERPUD2-202ENST00000396081 TRIM5Q9C035 493 aa21.7■■□□□ 1.06
HERPUD2-202ENST00000396081 CLTCQ00610 1675 aaKnown RBP21.7■■□□□ 1.06
HERPUD2-202ENST00000396081 GOLGA6L4A6NEF3 574 aa21.7■■□□□ 1.06
HERPUD2-202ENST00000396081 MTHFSDQ2M296 383 aaKnown RBP21.7■■□□□ 1.06
HERPUD2-202ENST00000396081 NAA30Q147X3 362 aaPredicted RBP21.69■■□□□ 1.06
HERPUD2-202ENST00000396081 NRBP1Q9UHY1 535 aa21.69■■□□□ 1.06
HERPUD2-202ENST00000396081 ALKQ9UM73 1620 aa21.69■■□□□ 1.06
HERPUD2-202ENST00000396081 MAP3K11Q16584 847 aa21.69■■□□□ 1.06
HERPUD2-202ENST00000396081 FAM200AQ8TCP9 573 aa21.69■■□□□ 1.06
HERPUD2-202ENST00000396081 ANKRD7Q92527 254 aa21.69■■□□□ 1.06
HERPUD2-202ENST00000396081 NUP62CLQ9H1M0 184 aa21.69■■□□□ 1.06
HERPUD2-202ENST00000396081 PDRG1Q9NUG6 133 aa21.69■■□□□ 1.06
HERPUD2-202ENST00000396081 CNTROBQ8N137 903 aa21.69■■□□□ 1.06
HERPUD2-202ENST00000396081 LSG1Q9H089 658 aaKnown RBP21.69■■□□□ 1.06
HERPUD2-202ENST00000396081 PRPF40BQ6NWY9 871 aaKnown RBP21.68■■□□□ 1.06
HERPUD2-202ENST00000396081 TYRO3Q06418 890 aa21.68■■□□□ 1.06
HERPUD2-202ENST00000396081 PPP1R42Q7Z4L9 355 aa21.68■■□□□ 1.06
HERPUD2-202ENST00000396081 CPS1P31327 1500 aa21.68■■□□□ 1.06
HERPUD2-202ENST00000396081 TNNT1P13805 278 aa21.67■■□□□ 1.06
HERPUD2-202ENST00000396081 LIG1P18858 919 aa21.67■■□□□ 1.06
HERPUD2-202ENST00000396081 OS9Q13438 667 aaPredicted RBP21.67■■□□□ 1.06
HERPUD2-202ENST00000396081 CCDC30Q5VVM6 783 aa21.67■■□□□ 1.06
HERPUD2-202ENST00000396081 NCBP1Q09161 790 aaKnown RBP21.67■■□□□ 1.06
HERPUD2-202ENST00000396081 RHPN1Q8TCX5 695 aa21.67■■□□□ 1.06
HERPUD2-202ENST00000396081 SOS1Q07889 1333 aaPredicted RBP21.67■■□□□ 1.06
HERPUD2-202ENST00000396081 KCNJ4P48050 445 aa21.66■■□□□ 1.06
HERPUD2-202ENST00000396081 ADCK5Q3MIX3 580 aa21.66■■□□□ 1.06
HERPUD2-202ENST00000396081 LARP1BQ659C4 914 aaKnown RBP21.66■■□□□ 1.06
HERPUD2-202ENST00000396081 USP44Q9H0E7 712 aa21.66■■□□□ 1.06
HERPUD2-202ENST00000396081 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.66■■□□□ 1.06
HERPUD2-202ENST00000396081 SRGAP3O43295 1099 aa21.66■■□□□ 1.06
HERPUD2-202ENST00000396081 ANO6Q4KMQ2 910 aa21.66■■□□□ 1.06
HERPUD2-202ENST00000396081 TTC6Q86TZ1 520 aa21.66■■□□□ 1.06
HERPUD2-202ENST00000396081 TNMDQ9H2S6 317 aa21.66■■□□□ 1.06
HERPUD2-202ENST00000396081 HYPKQ9NX55 129 aa21.66■■□□□ 1.06
HERPUD2-202ENST00000396081 TFIP11Q9UBB9 837 aaKnown RBP21.66■■□□□ 1.06
HERPUD2-202ENST00000396081 CRB1P82279 1406 aa21.65■■□□□ 1.06
HERPUD2-202ENST00000396081 CTIFO43310 598 aaKnown RBP21.65■■□□□ 1.06
HERPUD2-202ENST00000396081 KRT85P78386 507 aa21.65■■□□□ 1.06
HERPUD2-202ENST00000396081 TPD52L1Q16890 204 aaPredicted RBP21.65■■□□□ 1.06
HERPUD2-202ENST00000396081 FGD1P98174 961 aa21.64■■□□□ 1.06
HERPUD2-202ENST00000396081 PI4K2BQ8TCG2 481 aa21.64■■□□□ 1.06
HERPUD2-202ENST00000396081 DACT1Q9NYF0 836 aa21.64■■□□□ 1.06
HERPUD2-202ENST00000396081 MRVI1Q9Y6F6 885 aa21.64■■□□□ 1.06
HERPUD2-202ENST00000396081 IL17RAQ96F46 866 aa21.64■■□□□ 1.05
HERPUD2-202ENST00000396081 CYP46A1Q9Y6A2 500 aa21.64■■□□□ 1.05
HERPUD2-202ENST00000396081 MAP3K19Q56UN5 1328 aa21.64■■□□□ 1.05
HERPUD2-202ENST00000396081 CCDC112Q8NEF3 446 aa21.64■■□□□ 1.05
HERPUD2-202ENST00000396081 PTH1RQ03431 593 aa21.63■■□□□ 1.05
HERPUD2-202ENST00000396081 CBX8Q9HC52 389 aa21.63■■□□□ 1.05
HERPUD2-202ENST00000396081 TCEANC2Q96MN5 208 aa21.63■■□□□ 1.05
HERPUD2-202ENST00000396081 CGNQ9P2M7 1197 aaKnown RBP21.63■■□□□ 1.05
HERPUD2-202ENST00000396081 FEZ1Q99689 392 aa21.62■■□□□ 1.05
HERPUD2-202ENST00000396081 OGFRQ9NZT2 677 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms