RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 PNMA6EA0A0J9YXQ4 647 aa15.06■□□□□ 0
ITGB1-202ENST00000396033 OTUD7AQ8TE49 926 aaPredicted RBP15.06■□□□□ 0
ITGB1-202ENST00000396033 BECN1Q14457 450 aa15.06■□□□□ 0
ITGB1-202ENST00000396033 EXOC6BQ9Y2D4 811 aa15.06■□□□□ 0
ITGB1-202ENST00000396033 GSPT1P15170 499 aaKnown RBP15.05■□□□□ 0
ITGB1-202ENST00000396033 TTC5Q8N0Z6 440 aa15.05■□□□□ 0
ITGB1-202ENST00000396033 HYPKQ9NX55 129 aa15.05■□□□□ 0
ITGB1-202ENST00000396033 TTC22Q5TAA0 569 aa15.05■□□□□ -0
ITGB1-202ENST00000396033 C5P01031 1676 aa15.05■□□□□ -0
ITGB1-202ENST00000396033 STRN4Q9NRL3 753 aa15.05■□□□□ -0
ITGB1-202ENST00000396033 MAP3K2Q9Y2U5 619 aa15.04■□□□□ -0
ITGB1-202ENST00000396033 PCDH11XQ9BZA7 1347 aa15.04■□□□□ -0
ITGB1-202ENST00000396033 PCDH11YQ9BZA8 1340 aa15.04■□□□□ -0
ITGB1-202ENST00000396033 CABP4P57796 275 aa15.04■□□□□ -0
ITGB1-202ENST00000396033 TBC1D9Q6ZT07 1266 aa15.04■□□□□ -0
ITGB1-202ENST00000396033 CDC45O75419 566 aa15.04■□□□□ -0
ITGB1-202ENST00000396033 DDX21Q9NR30 783 aaKnown RBP eCLIP15.04■□□□□ -0
ITGB1-202ENST00000396033 ZCRB1Q8TBF4 217 aaKnown RBP15.03■□□□□ -0
ITGB1-202ENST00000396033 ZNF496Q96IT1 587 aaPredicted RBP15.03■□□□□ -0
ITGB1-202ENST00000396033 KSR2Q6VAB6 950 aa15.03■□□□□ -0
ITGB1-202ENST00000396033 EVA1CP58658 441 aa15.03■□□□□ -0
ITGB1-202ENST00000396033 CARD10Q9BWT7 1032 aa15.03■□□□□ -0
ITGB1-202ENST00000396033 NBPF7P0C2Y1 421 aaPredicted RBP15.02■□□□□ -0
ITGB1-202ENST00000396033 UBE2Q2Q8WVN8 375 aa15.02■□□□□ -0
ITGB1-202ENST00000396033 LRRCC1Q9C099 1032 aa15.02■□□□□ -0
ITGB1-202ENST00000396033 DDX58O95786 925 aaKnown RBP15.02□□□□□ -0.01
ITGB1-202ENST00000396033 IBTKQ9P2D0 1353 aaPredicted RBP15.02□□□□□ -0.01
ITGB1-202ENST00000396033 IL2RBP14784 551 aa15.02□□□□□ -0.01
ITGB1-202ENST00000396033 AIMP1Q12904 312 aaKnown RBP15.02□□□□□ -0.01
ITGB1-202ENST00000396033 LARP1Q6PKG0 1096 aaKnown RBP15.02□□□□□ -0.01
ITGB1-202ENST00000396033 PDIA6Q15084 440 aa15.01□□□□□ -0.01
ITGB1-202ENST00000396033 FMNL2Q96PY5 1086 aa15.01□□□□□ -0.01
ITGB1-202ENST00000396033 ALDH1L1O75891 902 aa15.01□□□□□ -0.01
ITGB1-202ENST00000396033 SNRPA1P09661 255 aaKnown RBP15.01□□□□□ -0.01
ITGB1-202ENST00000396033 PPP1R42Q7Z4L9 355 aa15.01□□□□□ -0.01
ITGB1-202ENST00000396033 MYL6BP14649 208 aa15□□□□□ -0.01
ITGB1-202ENST00000396033 SSH3Q8TE77 659 aa15□□□□□ -0.01
ITGB1-202ENST00000396033 C9orf78Q9NZ63 289 aaPredicted RBP15□□□□□ -0.01
ITGB1-202ENST00000396033 SRGAP3O43295 1099 aa14.99□□□□□ -0.01
ITGB1-202ENST00000396033 RBM25P49756 843 aaKnown RBP14.99□□□□□ -0.01
ITGB1-202ENST00000396033 PDE1AP54750 535 aa14.99□□□□□ -0.01
ITGB1-202ENST00000396033 CWF19L2Q2TBE0 894 aaKnown RBP14.99□□□□□ -0.01
ITGB1-202ENST00000396033 ROBO1Q9Y6N7 1651 aa14.98□□□□□ -0.01
ITGB1-202ENST00000396033 SDSP20132 328 aa14.98□□□□□ -0.01
ITGB1-202ENST00000396033 POLA2Q14181 598 aa14.98□□□□□ -0.01
ITGB1-202ENST00000396033 RIC3Q7Z5B4 369 aa14.98□□□□□ -0.01
ITGB1-202ENST00000396033 DDX54Q8TDD1 881 aaKnown RBP14.98□□□□□ -0.01
ITGB1-202ENST00000396033 TBC1D2Q9BYX2 928 aa14.98□□□□□ -0.01
ITGB1-202ENST00000396033 RTL5Q5HYW3 569 aaPredicted RBP14.98□□□□□ -0.01
ITGB1-202ENST00000396033 LINS1Q8NG48 757 aa14.98□□□□□ -0.01
ITGB1-202ENST00000396033 OSBPL3Q9H4L5 887 aa14.98□□□□□ -0.01
ITGB1-202ENST00000396033 USP16Q9Y5T5 823 aa14.98□□□□□ -0.01
ITGB1-202ENST00000396033 SURF6O75683 361 aaKnown RBP14.97□□□□□ -0.01
ITGB1-202ENST00000396033 XAGE3Q8WTP9 111 aa14.97□□□□□ -0.01
ITGB1-202ENST00000396033 USP35Q9P2H5 1018 aa14.97□□□□□ -0.01
ITGB1-202ENST00000396033 EIF5BO60841 1220 aaKnown RBP14.97□□□□□ -0.01
ITGB1-202ENST00000396033 SHANK3Q9BYB0 1731 aa14.96□□□□□ -0.01
ITGB1-202ENST00000396033 ERVV-2B6SEH9 535 aa14.96□□□□□ -0.01
ITGB1-202ENST00000396033 MX1P20591 662 aa14.96□□□□□ -0.01
ITGB1-202ENST00000396033 CASC1Q6TDU7 716 aa14.96□□□□□ -0.01
ITGB1-202ENST00000396033 BTG4Q9NY30 223 aa14.96□□□□□ -0.01
ITGB1-202ENST00000396033 RAB11FIP3O75154 756 aa14.96□□□□□ -0.01
ITGB1-202ENST00000396033 COPS6Q7L5N1 327 aa14.96□□□□□ -0.01
ITGB1-202ENST00000396033 HDAC5Q9UQL6 1122 aa14.96□□□□□ -0.01
ITGB1-202ENST00000396033 GLI3P10071 1580 aa14.96□□□□□ -0.01
ITGB1-202ENST00000396033 LAMB4A4D0S4 1761 aa14.96□□□□□ -0.02
ITGB1-202ENST00000396033 SALL3Q9BXA9 1300 aa14.96□□□□□ -0.02
ITGB1-202ENST00000396033 PIP4K2AP48426 406 aaPredicted RBP14.96□□□□□ -0.02
ITGB1-202ENST00000396033 TSHZ3Q63HK5 1081 aa14.96□□□□□ -0.02
ITGB1-202ENST00000396033 NEXNQ0ZGT2 675 aa14.95□□□□□ -0.02
ITGB1-202ENST00000396033 NKX1-1Q15270 411 aaPredicted RBP14.95□□□□□ -0.02
ITGB1-202ENST00000396033 GRM8O00222 908 aa14.95□□□□□ -0.02
ITGB1-202ENST00000396033 IL1RAPL2Q9NP60 686 aa14.95□□□□□ -0.02
ITGB1-202ENST00000396033 AHDC1Q5TGY3 1603 aaPredicted RBP14.94□□□□□ -0.02
ITGB1-202ENST00000396033 MTX1Q13505 466 aa14.94□□□□□ -0.02
ITGB1-202ENST00000396033 IGKV5-2P06315 115 aa14.93□□□□□ -0.02
ITGB1-202ENST00000396033 LRP10Q7Z4F1 713 aa14.93□□□□□ -0.02
ITGB1-202ENST00000396033 MYD88Q99836 296 aa14.93□□□□□ -0.02
ITGB1-202ENST00000396033 COL14A1Q05707 1796 aaKnown RBP14.93□□□□□ -0.02
ITGB1-202ENST00000396033 HSP90AB4PQ58FF6 505 aa14.93□□□□□ -0.02
ITGB1-202ENST00000396033 HSCBQ8IWL3 235 aa14.93□□□□□ -0.02
ITGB1-202ENST00000396033 RHPN1Q8TCX5 695 aa14.93□□□□□ -0.02
ITGB1-202ENST00000396033 KIF1BPQ96EK5 621 aa14.93□□□□□ -0.02
ITGB1-202ENST00000396033 SLKQ9H2G2 1235 aaPredicted RBP14.93□□□□□ -0.02
ITGB1-202ENST00000396033 OS9Q13438 667 aaPredicted RBP14.93□□□□□ -0.02
ITGB1-202ENST00000396033 ANKRD13DQ6ZTN6 518 aa14.93□□□□□ -0.02
ITGB1-202ENST00000396033 METTL22Q9BUU2 404 aaPredicted RBP14.93□□□□□ -0.02
ITGB1-202ENST00000396033 UBR2Q8IWV8 1755 aa14.92□□□□□ -0.02
ITGB1-202ENST00000396033 PAPPAQ13219 1627 aa14.92□□□□□ -0.02
ITGB1-202ENST00000396033 SUCLG2Q96I99 432 aa14.92□□□□□ -0.02
ITGB1-202ENST00000396033 UTYO14607 1347 aa14.92□□□□□ -0.02
ITGB1-202ENST00000396033 NEURL1BA8MQ27 555 aa14.92□□□□□ -0.02
ITGB1-202ENST00000396033 STAP2Q9UGK3 403 aa14.92□□□□□ -0.02
ITGB1-202ENST00000396033 KCPQ6ZWJ8 1503 aa14.92□□□□□ -0.02
ITGB1-202ENST00000396033 NUTM1Q86Y26 1132 aa14.91□□□□□ -0.02
ITGB1-202ENST00000396033 COL22A1Q8NFW1 1626 aaPredicted RBP14.91□□□□□ -0.02
ITGB1-202ENST00000396033 AOX1Q06278 1338 aa14.9□□□□□ -0.02
ITGB1-202ENST00000396033 LTBP4Q8N2S1 1624 aa14.9□□□□□ -0.02
ITGB1-202ENST00000396033 TOGARAM1Q9Y4F4 1720 aa14.9□□□□□ -0.02
ITGB1-202ENST00000396033 PTCD1O75127 700 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms