RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 CANXP27824 592 aaKnown RBP18.23■□□□□ 0.51
CXCL12-205ENST00000395794 MCM10Q7L590 875 aa18.23■□□□□ 0.51
CXCL12-205ENST00000395794 NPM2Q86SE8 214 aaKnown RBP18.23■□□□□ 0.51
CXCL12-205ENST00000395794 HEG1Q9ULI3 1381 aa18.22■□□□□ 0.51
CXCL12-205ENST00000395794 TGFB2P61812 414 aa18.22■□□□□ 0.51
CXCL12-205ENST00000395794 FKBP8Q14318 412 aa18.22■□□□□ 0.51
CXCL12-205ENST00000395794 ZBTB1Q9Y2K1 713 aa18.22■□□□□ 0.51
CXCL12-205ENST00000395794 MAPK8IP3Q9UPT6 1336 aa18.22■□□□□ 0.51
CXCL12-205ENST00000395794 A0A087WZG4 1122 aa18.21■□□□□ 0.51
CXCL12-205ENST00000395794 USPL1Q5W0Q7 1092 aa18.21■□□□□ 0.51
CXCL12-205ENST00000395794 NARFQ9UHQ1 456 aa18.21■□□□□ 0.51
CXCL12-205ENST00000395794 MYH14Q7Z406 1995 aaKnown RBP18.21■□□□□ 0.5
CXCL12-205ENST00000395794 COL15A1P39059 1388 aa18.2■□□□□ 0.5
CXCL12-205ENST00000395794 ZNF784Q8NCA9 323 aaPredicted RBP18.2■□□□□ 0.5
CXCL12-205ENST00000395794 WWC3Q9ULE0 1092 aa18.2■□□□□ 0.5
CXCL12-205ENST00000395794 VIRMAQ69YN4 1812 aaKnown RBP18.2■□□□□ 0.5
CXCL12-205ENST00000395794 ZEB1P37275 1124 aaPredicted RBP18.19■□□□□ 0.5
CXCL12-205ENST00000395794 DCTN1Q14203 1278 aa18.19■□□□□ 0.5
CXCL12-205ENST00000395794 ZNF330Q9Y3S2 320 aaPredicted RBP18.19■□□□□ 0.5
CXCL12-205ENST00000395794 UTRNP46939 3433 aa18.19■□□□□ 0.5
CXCL12-205ENST00000395794 MYBBP1AQ9BQG0 1328 aaKnown RBP18.18■□□□□ 0.5
CXCL12-205ENST00000395794 C4AP0C0L4 1744 aa18.18■□□□□ 0.5
CXCL12-205ENST00000395794 UBR2Q8IWV8 1755 aa18.17■□□□□ 0.5
CXCL12-205ENST00000395794 C10orf71Q711Q0 1435 aa18.17■□□□□ 0.5
CXCL12-205ENST00000395794 A0A0G2JLW4 131 aa18.17■□□□□ 0.5
CXCL12-205ENST00000395794 KCNQ3O43525 872 aa18.17■□□□□ 0.5
CXCL12-205ENST00000395794 TAF7Q15545 349 aaPredicted RBP18.17■□□□□ 0.5
CXCL12-205ENST00000395794 NFE2L2Q16236 605 aa18.17■□□□□ 0.5
CXCL12-205ENST00000395794 SNRPA1P09661 255 aaKnown RBP18.16■□□□□ 0.5
CXCL12-205ENST00000395794 TM4SF1P30408 202 aa18.16■□□□□ 0.5
CXCL12-205ENST00000395794 IL6STP40189 918 aaPredicted RBP18.16■□□□□ 0.5
CXCL12-205ENST00000395794 EIF5P55010 431 aaKnown RBP18.16■□□□□ 0.5
CXCL12-205ENST00000395794 DDR1Q08345 913 aa18.16■□□□□ 0.5
CXCL12-205ENST00000395794 PNISRQ8TF01 805 aaKnown RBP18.16■□□□□ 0.5
CXCL12-205ENST00000395794 PLEKHF1Q96S99 279 aa18.16■□□□□ 0.5
CXCL12-205ENST00000395794 CHD4Q14839 1912 aa18.15■□□□□ 0.5
CXCL12-205ENST00000395794 SIPA1L3O60292 1781 aaPredicted RBP18.14■□□□□ 0.5
CXCL12-205ENST00000395794 PXDNLA1KZ92 1463 aa18.14■□□□□ 0.5
CXCL12-205ENST00000395794 POLRMTO00411 1230 aaKnown RBP18.14■□□□□ 0.49
CXCL12-205ENST00000395794 A1BGP04217 495 aa18.14■□□□□ 0.49
CXCL12-205ENST00000395794 DPEP1P16444 411 aa18.14■□□□□ 0.49
CXCL12-205ENST00000395794 NFIXQ14938 502 aa18.14■□□□□ 0.49
CXCL12-205ENST00000395794 BCS1LQ9Y276 419 aa18.14■□□□□ 0.49
CXCL12-205ENST00000395794 GOLGB1Q14789 3259 aaKnown RBP18.14■□□□□ 0.49
CXCL12-205ENST00000395794 WDR43Q15061 677 aaKnown RBP eCLIP18.12■□□□□ 0.49
CXCL12-205ENST00000395794 BICDL1Q6ZP65 573 aa18.12■□□□□ 0.49
CXCL12-205ENST00000395794 MIS18AQ9NYP9 233 aa18.12■□□□□ 0.49
CXCL12-205ENST00000395794 PIM2Q9P1W9 311 aa18.12■□□□□ 0.49
CXCL12-205ENST00000395794 TBC1D2BQ9UPU7 963 aa18.12■□□□□ 0.49
CXCL12-205ENST00000395794 USP16Q9Y5T5 823 aa18.12■□□□□ 0.49
CXCL12-205ENST00000395794 SERPINB2P05120 415 aa18.11■□□□□ 0.49
CXCL12-205ENST00000395794 BCL2L12Q9HB09 334 aa18.11■□□□□ 0.49
CXCL12-205ENST00000395794 LMOD3Q0VAK6 560 aa18.1■□□□□ 0.49
CXCL12-205ENST00000395794 DALRD3Q5D0E6 543 aaKnown RBP18.1■□□□□ 0.49
CXCL12-205ENST00000395794 RIPK4P57078 832 aa18.09■□□□□ 0.49
CXCL12-205ENST00000395794 ARHGAP27Q6ZUM4 889 aa18.09■□□□□ 0.49
CXCL12-205ENST00000395794 DZIP3Q86Y13 1208 aaKnown RBP18.09■□□□□ 0.49
CXCL12-205ENST00000395794 KIF13BQ9NQT8 1826 aa18.09■□□□□ 0.49
CXCL12-205ENST00000395794 PRAMEF22A3QJZ6 481 aa18.08■□□□□ 0.48
CXCL12-205ENST00000395794 NPHP1O15259 732 aa18.08■□□□□ 0.48
CXCL12-205ENST00000395794 SETDB2Q96T68 719 aa18.08■□□□□ 0.48
CXCL12-205ENST00000395794 THUMPD2Q9BTF0 503 aaKnown RBP18.08■□□□□ 0.48
CXCL12-205ENST00000395794 CHRNA5P30532 468 aa18.07■□□□□ 0.48
CXCL12-205ENST00000395794 TBC1D9BQ66K14 1250 aa18.07■□□□□ 0.48
CXCL12-205ENST00000395794 PRKRIP1Q9H875 184 aaPredicted RBP18.07■□□□□ 0.48
CXCL12-205ENST00000395794 ZNF652Q9Y2D9 606 aa18.07■□□□□ 0.48
CXCL12-205ENST00000395794 KCNA3P22001 575 aa18.06■□□□□ 0.48
CXCL12-205ENST00000395794 TMPOP42166 694 aaKnown RBP18.06■□□□□ 0.48
CXCL12-205ENST00000395794 PIP4K2AP48426 406 aaPredicted RBP18.06■□□□□ 0.48
CXCL12-205ENST00000395794 CARMIL3Q8ND23 1372 aa18.05■□□□□ 0.48
CXCL12-205ENST00000395794 N4BP2Q86UW6 1770 aaPredicted RBP18.05■□□□□ 0.48
CXCL12-205ENST00000395794 GIGYF1O75420 1035 aaPredicted RBP18.05■□□□□ 0.48
CXCL12-205ENST00000395794 CAMTA2O94983 1202 aa18.05■□□□□ 0.48
CXCL12-205ENST00000395794 CCDC146Q8IYE0 955 aa18.05■□□□□ 0.48
CXCL12-205ENST00000395794 RUNDC1Q96C34 613 aa18.05■□□□□ 0.48
CXCL12-205ENST00000395794 TSPYL4Q9UJ04 414 aa18.05■□□□□ 0.48
CXCL12-205ENST00000395794 H0YIN7 160 aa18.04■□□□□ 0.48
CXCL12-205ENST00000395794 EIF4A1P60842 406 aaKnown RBP18.04■□□□□ 0.48
CXCL12-205ENST00000395794 NEUROD2Q15784 382 aa18.04■□□□□ 0.48
CXCL12-205ENST00000395794 CLEC4GQ6UXB4 293 aa18.04■□□□□ 0.48
CXCL12-205ENST00000395794 C2CD5Q86YS7 1000 aa18.04■□□□□ 0.48
CXCL12-205ENST00000395794 ATP10DQ9P241 1426 aa18.04■□□□□ 0.48
CXCL12-205ENST00000395794 PDE6BP35913 854 aa18.03■□□□□ 0.48
CXCL12-205ENST00000395794 GPBP1L1Q9HC44 474 aaPredicted RBP18.03■□□□□ 0.48
CXCL12-205ENST00000395794 BABAM1Q9NWV8 329 aa18.03■□□□□ 0.48
CXCL12-205ENST00000395794 PDZRN3Q9UPQ7 1066 aa18.03■□□□□ 0.48
CXCL12-205ENST00000395794 KIAA1551Q9HCM1 1747 aa18.03■□□□□ 0.48
CXCL12-205ENST00000395794 NBPF26B4DH59 902 aa18.02■□□□□ 0.48
CXCL12-205ENST00000395794 ST5P78524 1137 aa18.02■□□□□ 0.48
CXCL12-205ENST00000395794 NBPF10Q6P3W6 841 aaKnown RBP18.02■□□□□ 0.48
CXCL12-205ENST00000395794 NBPF15Q8N660 670 aa18.02■□□□□ 0.48
CXCL12-205ENST00000395794 CNBD1Q8NA66 436 aa18.02■□□□□ 0.48
CXCL12-205ENST00000395794 BRIP1Q9BX63 1249 aa18.02■□□□□ 0.48
CXCL12-205ENST00000395794 ADAMTS8Q9UP79 889 aa18.02■□□□□ 0.48
CXCL12-205ENST00000395794 RRP7AQ9Y3A4 280 aaKnown RBP18.02■□□□□ 0.48
CXCL12-205ENST00000395794 RGL2O15211 777 aa18.01■□□□□ 0.47
CXCL12-205ENST00000395794 NGEFQ8N5V2 710 aa18.01■□□□□ 0.47
CXCL12-205ENST00000395794 TTLL6Q8N841 843 aa18.01■□□□□ 0.47
CXCL12-205ENST00000395794 ZNF526Q8TF50 670 aaPredicted RBP18.01■□□□□ 0.47
CXCL12-205ENST00000395794 DLG5Q8TDM6 1919 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms