RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 LRRCC1Q9C099 1032 aa6.83□□□□□ -1.32
RFFL-202ENST00000394597 ZNF521Q96K83 1311 aa6.82□□□□□ -1.32
RFFL-202ENST00000394597 RNMTO43148 476 aaKnown RBP6.82□□□□□ -1.32
RFFL-202ENST00000394597 CDC45O75419 566 aa6.82□□□□□ -1.32
RFFL-202ENST00000394597 SNRPA1P09661 255 aaKnown RBP6.82□□□□□ -1.32
RFFL-202ENST00000394597 IL2RBP14784 551 aa6.82□□□□□ -1.32
RFFL-202ENST00000394597 TEX35Q5T0J7 233 aa6.82□□□□□ -1.32
RFFL-202ENST00000394597 SOS1Q07889 1333 aaPredicted RBP6.82□□□□□ -1.32
RFFL-202ENST00000394597 SRGAP3O43295 1099 aa6.82□□□□□ -1.32
RFFL-202ENST00000394597 ST18O60284 1047 aa6.82□□□□□ -1.32
RFFL-202ENST00000394597 IGHDP01880 384 aa6.82□□□□□ -1.32
RFFL-202ENST00000394597 NUCB2P80303 420 aa6.82□□□□□ -1.32
RFFL-202ENST00000394597 FOXD4L6Q3SYB3 417 aaPredicted RBP6.82□□□□□ -1.32
RFFL-202ENST00000394597 C8orf34Q49A92 452 aa6.82□□□□□ -1.32
RFFL-202ENST00000394597 FOXD4L3Q6VB84 417 aaPredicted RBP6.82□□□□□ -1.32
RFFL-202ENST00000394597 GOLGA6L4A6NEF3 574 aa6.81□□□□□ -1.32
RFFL-202ENST00000394597 HSP90B1P14625 803 aaKnown RBP6.81□□□□□ -1.32
RFFL-202ENST00000394597 KRT24Q2M2I5 525 aa6.81□□□□□ -1.32
RFFL-202ENST00000394597 LRRFIP1Q32MZ4 808 aaKnown RBP6.81□□□□□ -1.32
RFFL-202ENST00000394597 ARHGEF25Q86VW2 580 aa6.81□□□□□ -1.32
RFFL-202ENST00000394597 DCAF5Q96JK2 942 aa6.81□□□□□ -1.32
RFFL-202ENST00000394597 TEX13AQ9BXU3 409 aaPredicted RBP6.81□□□□□ -1.32
RFFL-202ENST00000394597 TMX4Q9H1E5 349 aaPredicted RBP6.81□□□□□ -1.32
RFFL-202ENST00000394597 KIF24Q5T7B8 1368 aa6.81□□□□□ -1.32
RFFL-202ENST00000394597 PTCH1Q13635 1447 aa6.81□□□□□ -1.32
RFFL-202ENST00000394597 PCDHB15Q9Y5E8 787 aa6.81□□□□□ -1.32
RFFL-202ENST00000394597 MED14O60244 1454 aa6.81□□□□□ -1.32
RFFL-202ENST00000394597 CPSF1Q10570 1443 aaKnown RBP6.81□□□□□ -1.32
RFFL-202ENST00000394597 RLBP1P12271 317 aa6.81□□□□□ -1.32
RFFL-202ENST00000394597 NFATC2IPQ8NCF5 419 aa6.81□□□□□ -1.32
RFFL-202ENST00000394597 TNNQ9UQP3 1299 aa6.81□□□□□ -1.32
RFFL-202ENST00000394597 ADGRL3Q9HAR2 1447 aa6.81□□□□□ -1.32
RFFL-202ENST00000394597 PI4KAP2A4QPH2 592 aa6.81□□□□□ -1.32
RFFL-202ENST00000394597 HDAC1Q13547 482 aaPredicted RBP6.81□□□□□ -1.32
RFFL-202ENST00000394597 ZRSR1Q15695 479 aaKnown RBP6.81□□□□□ -1.32
RFFL-202ENST00000394597 PI4KAP1Q8N8J0 262 aa6.81□□□□□ -1.32
RFFL-202ENST00000394597 IPO4Q8TEX9 1081 aaKnown RBP6.81□□□□□ -1.32
RFFL-202ENST00000394597 NEUROD6Q96NK8 337 aa6.81□□□□□ -1.32
RFFL-202ENST00000394597 DNAJC2Q99543 621 aaKnown RBP6.81□□□□□ -1.32
RFFL-202ENST00000394597 GPS2Q13227 327 aa6.8□□□□□ -1.32
RFFL-202ENST00000394597 SLC39A6Q13433 755 aa6.8□□□□□ -1.32
RFFL-202ENST00000394597 TECPR2O15040 1411 aa6.8□□□□□ -1.32
RFFL-202ENST00000394597 CDK12Q9NYV4 1490 aaPredicted RBP6.8□□□□□ -1.32
RFFL-202ENST00000394597 PRPF40AO75400 957 aaKnown RBP6.8□□□□□ -1.32
RFFL-202ENST00000394597 MYD88Q99836 296 aa6.8□□□□□ -1.32
RFFL-202ENST00000394597 LGR6Q9HBX8 967 aa6.8□□□□□ -1.32
RFFL-202ENST00000394597 BTG4Q9NY30 223 aa6.8□□□□□ -1.32
RFFL-202ENST00000394597 CALCOCO1Q9P1Z2 691 aa6.8□□□□□ -1.32
RFFL-202ENST00000394597 CHPF2Q9P2E5 772 aa6.8□□□□□ -1.32
RFFL-202ENST00000394597 MAP3K2Q9Y2U5 619 aa6.8□□□□□ -1.32
RFFL-202ENST00000394597 IGSF1Q8N6C5 1336 aa6.8□□□□□ -1.32
RFFL-202ENST00000394597 RAB11FIP3O75154 756 aa6.8□□□□□ -1.32
RFFL-202ENST00000394597 TERF1P54274 439 aa6.8□□□□□ -1.32
RFFL-202ENST00000394597 CNTROBQ8N137 903 aa6.8□□□□□ -1.32
RFFL-202ENST00000394597 TIGD1Q96MW7 591 aa6.8□□□□□ -1.32
RFFL-202ENST00000394597 CIZ1Q9ULV3 898 aaPredicted RBP6.8□□□□□ -1.32
RFFL-202ENST00000394597 RTL1A6NKG5 1358 aa6.79□□□□□ -1.32
RFFL-202ENST00000394597 ANXA1P04083 346 aa6.79□□□□□ -1.32
RFFL-202ENST00000394597 TSPYL1Q9H0U9 437 aa6.79□□□□□ -1.32
RFFL-202ENST00000394597 EXOC6BQ9Y2D4 811 aa6.79□□□□□ -1.32
RFFL-202ENST00000394597 LRRFIP2Q9Y608 721 aaKnown RBP6.79□□□□□ -1.32
RFFL-202ENST00000394597 ZNF335Q9H4Z2 1342 aaPredicted RBP6.79□□□□□ -1.32
RFFL-202ENST00000394597 TNPO1Q92973 898 aaKnown RBP6.79□□□□□ -1.32
RFFL-202ENST00000394597 ANO2Q9NQ90 1003 aa6.79□□□□□ -1.32
RFFL-202ENST00000394597 PTPRUQ92729 1446 aa6.79□□□□□ -1.32
RFFL-202ENST00000394597 RIMS1Q86UR5 1692 aaKnown RBP6.79□□□□□ -1.32
RFFL-202ENST00000394597 MCM5P33992 734 aa6.79□□□□□ -1.32
RFFL-202ENST00000394597 IL17REQ8NFR9 667 aa6.79□□□□□ -1.32
RFFL-202ENST00000394597 USP31Q70CQ4 1352 aa6.79□□□□□ -1.32
RFFL-202ENST00000394597 PNPLA6Q8IY17 1366 aa6.79□□□□□ -1.32
RFFL-202ENST00000394597 FAM177BA6PVY3 158 aa6.78□□□□□ -1.32
RFFL-202ENST00000394597 HOXB7P09629 217 aa6.78□□□□□ -1.32
RFFL-202ENST00000394597 NOM1Q5C9Z4 860 aaKnown RBP6.78□□□□□ -1.32
RFFL-202ENST00000394597 ANKRD13DQ6ZTN6 518 aa6.78□□□□□ -1.32
RFFL-202ENST00000394597 NOL8Q76FK4 1167 aaKnown RBP6.78□□□□□ -1.32
RFFL-202ENST00000394597 ZBTB40Q9NUA8 1239 aa6.78□□□□□ -1.32
RFFL-202ENST00000394597 SETD1BQ9UPS6 1966 aaKnown RBP6.78□□□□□ -1.32
RFFL-202ENST00000394597 PCDH11XQ9BZA7 1347 aa6.78□□□□□ -1.32
RFFL-202ENST00000394597 PCDH11YQ9BZA8 1340 aa6.78□□□□□ -1.32
RFFL-202ENST00000394597 CEP170BQ9Y4F5 1589 aaPredicted RBP6.78□□□□□ -1.32
RFFL-202ENST00000394597 DMTNQ08495 405 aa6.78□□□□□ -1.32
RFFL-202ENST00000394597 KSR2Q6VAB6 950 aa6.78□□□□□ -1.32
RFFL-202ENST00000394597 KIF1BPQ96EK5 621 aa6.78□□□□□ -1.32
RFFL-202ENST00000394597 SIL1Q9H173 461 aa6.78□□□□□ -1.32
RFFL-202ENST00000394597 KDM2BQ8NHM5 1336 aa6.78□□□□□ -1.32
RFFL-202ENST00000394597 KIAA0232Q92628 1395 aa6.78□□□□□ -1.32
RFFL-202ENST00000394597 CCDC57Q2TAC2 916 aa6.78□□□□□ -1.32
RFFL-202ENST00000394597 MEIS3Q99687 375 aa6.78□□□□□ -1.32
RFFL-202ENST00000394597 ZKSCAN5Q9Y2L8 839 aa6.78□□□□□ -1.32
RFFL-202ENST00000394597 ZKSCAN1P17029 563 aaPredicted RBP6.77□□□□□ -1.32
RFFL-202ENST00000394597 DDB1Q16531 1140 aa6.77□□□□□ -1.32
RFFL-202ENST00000394597 COPS6Q7L5N1 327 aa6.77□□□□□ -1.32
RFFL-202ENST00000394597 ANKRD44Q8N8A2 993 aa6.77□□□□□ -1.32
RFFL-202ENST00000394597 PRIMPOLQ96LW4 560 aa6.77□□□□□ -1.32
RFFL-202ENST00000394597 IL1RAPL2Q9NP60 686 aa6.77□□□□□ -1.32
RFFL-202ENST00000394597 FER1L4A9Z1Z3 1794 aa6.77□□□□□ -1.33
RFFL-202ENST00000394597 ZBTB7BO15156 539 aaPredicted RBP6.77□□□□□ -1.33
RFFL-202ENST00000394597 ALDH1L1O75891 902 aa6.77□□□□□ -1.33
RFFL-202ENST00000394597 ZNF790Q6PG37 636 aa6.77□□□□□ -1.33
RFFL-202ENST00000394597 XAGE3Q8WTP9 111 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms