RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 GSPT1P15170 499 aaKnown RBP26.22■■□□□ 1.79
CLDND1-202ENST00000394180 TULP2O00295 520 aa26.21■■□□□ 1.79
CLDND1-202ENST00000394180 ABTB2Q8N961 1025 aa26.21■■□□□ 1.79
CLDND1-202ENST00000394180 LTBP4Q8N2S1 1624 aa26.21■■□□□ 1.79
CLDND1-202ENST00000394180 TERF2Q15554 542 aa26.2■■□□□ 1.79
CLDND1-202ENST00000394180 PLEKHM2Q8IWE5 1019 aa26.2■■□□□ 1.79
CLDND1-202ENST00000394180 SLAIN2Q9P270 581 aa26.2■■□□□ 1.79
CLDND1-202ENST00000394180 PIK3C2AO00443 1686 aa26.2■■□□□ 1.79
CLDND1-202ENST00000394180 OVOS2A0A0J9YW53 1432 aa26.2■■□□□ 1.78
CLDND1-202ENST00000394180 OVOS2Q6IE36 1432 aa26.2■■□□□ 1.78
CLDND1-202ENST00000394180 SMTNL1A8MU46 457 aa26.2■■□□□ 1.78
CLDND1-202ENST00000394180 NCBP1Q09161 790 aaKnown RBP26.2■■□□□ 1.78
CLDND1-202ENST00000394180 TMPOP42166 694 aaKnown RBP26.19■■□□□ 1.78
CLDND1-202ENST00000394180 NLRP6P59044 892 aa26.19■■□□□ 1.78
CLDND1-202ENST00000394180 PLEKHF1Q96S99 279 aa26.19■■□□□ 1.78
CLDND1-202ENST00000394180 TRIM35Q9UPQ4 493 aa26.19■■□□□ 1.78
CLDND1-202ENST00000394180 RRS1Q15050 365 aaKnown RBP26.18■■□□□ 1.78
CLDND1-202ENST00000394180 BRINP3Q76B58 766 aa26.18■■□□□ 1.78
CLDND1-202ENST00000394180 PAXBP1Q9Y5B6 917 aa26.18■■□□□ 1.78
CLDND1-202ENST00000394180 KRT28Q7Z3Y7 464 aa26.17■■□□□ 1.78
CLDND1-202ENST00000394180 POLKQ9UBT6 870 aa26.17■■□□□ 1.78
CLDND1-202ENST00000394180 FAM53CQ9NYF3 392 aa26.16■■□□□ 1.78
CLDND1-202ENST00000394180 EMILIN1Q9Y6C2 1016 aa26.16■■□□□ 1.78
CLDND1-202ENST00000394180 KIF1AQ12756 1690 aa26.16■■□□□ 1.78
CLDND1-202ENST00000394180 U2AF1L5P0DN76 240 aaPredicted RBP26.16■■□□□ 1.78
CLDND1-202ENST00000394180 MX1P20591 662 aa26.16■■□□□ 1.78
CLDND1-202ENST00000394180 U2AF1Q01081 240 aaKnown RBP eCLIP26.16■■□□□ 1.78
CLDND1-202ENST00000394180 KRT222Q8N1A0 295 aa26.16■■□□□ 1.78
CLDND1-202ENST00000394180 KCNJ4P48050 445 aa26.15■■□□□ 1.78
CLDND1-202ENST00000394180 IL17RAQ96F46 866 aa26.15■■□□□ 1.78
CLDND1-202ENST00000394180 MAP2P11137 1827 aaKnown RBP26.15■■□□□ 1.78
CLDND1-202ENST00000394180 LMOD2Q6P5Q4 547 aa26.14■■□□□ 1.78
CLDND1-202ENST00000394180 DCTPP1Q9H773 170 aa26.13■■□□□ 1.77
CLDND1-202ENST00000394180 SIRT2Q8IXJ6 389 aa26.12■■□□□ 1.77
CLDND1-202ENST00000394180 KIF18AQ8NI77 898 aa26.12■■□□□ 1.77
CLDND1-202ENST00000394180 TMX3Q96JJ7 454 aa26.12■■□□□ 1.77
CLDND1-202ENST00000394180 USP31Q70CQ4 1352 aa26.12■■□□□ 1.77
CLDND1-202ENST00000394180 ABCC4O15439 1325 aa26.12■■□□□ 1.77
CLDND1-202ENST00000394180 WDR33Q9C0J8 1336 aaKnown RBP26.11■■□□□ 1.77
CLDND1-202ENST00000394180 FAM177BA6PVY3 158 aa26.11■■□□□ 1.77
CLDND1-202ENST00000394180 KCNF1Q9H3M0 494 aa26.11■■□□□ 1.77
CLDND1-202ENST00000394180 AATKQ6ZMQ8 1374 aa26.11■■□□□ 1.77
CLDND1-202ENST00000394180 ANAPC15P60006 121 aa26.1■■□□□ 1.77
CLDND1-202ENST00000394180 C17orf53Q8N3J3 647 aaPredicted RBP26.1■■□□□ 1.77
CLDND1-202ENST00000394180 NPHP3Q7Z494 1330 aa26.1■■□□□ 1.77
CLDND1-202ENST00000394180 MARF1Q9Y4F3 1742 aaKnown RBP26.09■■□□□ 1.77
CLDND1-202ENST00000394180 TRPM3Q9HCF6 1732 aaPredicted RBP26.09■■□□□ 1.77
CLDND1-202ENST00000394180 ERC2O15083 957 aa26.09■■□□□ 1.77
CLDND1-202ENST00000394180 RTL1A6NKG5 1358 aa26.09■■□□□ 1.77
CLDND1-202ENST00000394180 SLFNL1Q499Z3 407 aa26.08■■□□□ 1.77
CLDND1-202ENST00000394180 FUCA2Q9BTY2 467 aa26.08■■□□□ 1.77
CLDND1-202ENST00000394180 COL3A1P02461 1466 aaPredicted RBP26.08■■□□□ 1.77
CLDND1-202ENST00000394180 PYCARDQ9ULZ3 195 aa26.08■■□□□ 1.77
CLDND1-202ENST00000394180 ZNF397Q8NF99 534 aaPredicted RBP26.07■■□□□ 1.76
CLDND1-202ENST00000394180 UBE2HP62256 183 aa26.06■■□□□ 1.76
CLDND1-202ENST00000394180 USP48Q86UV5 1035 aa26.06■■□□□ 1.76
CLDND1-202ENST00000394180 VGLL3A8MV65 326 aa26.06■■□□□ 1.76
CLDND1-202ENST00000394180 IGSF3O75054 1194 aa26.06■■□□□ 1.76
CLDND1-202ENST00000394180 PNPLA6Q8IY17 1366 aa26.05■■□□□ 1.76
CLDND1-202ENST00000394180 EPB41L2O43491 1005 aaKnown RBP26.05■■□□□ 1.76
CLDND1-202ENST00000394180 MRPL50Q8N5N7 158 aaKnown RBP26.05■■□□□ 1.76
CLDND1-202ENST00000394180 PXDNQ92626 1479 aa26.04■■□□□ 1.76
CLDND1-202ENST00000394180 HCLS1P14317 486 aaPredicted RBP26.04■■□□□ 1.76
CLDND1-202ENST00000394180 MAP3K19Q56UN5 1328 aa26.04■■□□□ 1.76
CLDND1-202ENST00000394180 RPAP1Q9BWH6 1393 aaPredicted RBP26.03■■□□□ 1.76
CLDND1-202ENST00000394180 SDSP20132 328 aa26.02■■□□□ 1.76
CLDND1-202ENST00000394180 RNF20Q5VTR2 975 aa26.02■■□□□ 1.76
CLDND1-202ENST00000394180 U2SURPO15042 1029 aaKnown RBP26.02■■□□□ 1.76
CLDND1-202ENST00000394180 CCDC112Q8NEF3 446 aa26.02■■□□□ 1.76
CLDND1-202ENST00000394180 API5Q9BZZ5 524 aaKnown RBP26.02■■□□□ 1.76
CLDND1-202ENST00000394180 RGS12O14924 1447 aa26.02■■□□□ 1.76
CLDND1-202ENST00000394180 DIAPH1O60610 1272 aaKnown RBP26.01■■□□□ 1.75
CLDND1-202ENST00000394180 GADD45BO75293 160 aaPredicted RBP26.01■■□□□ 1.75
CLDND1-202ENST00000394180 USP54Q70EL1 1684 aa26.01■■□□□ 1.75
CLDND1-202ENST00000394180 MCCP23508 829 aa26■■□□□ 1.75
CLDND1-202ENST00000394180 ZBTB22O15209 634 aa26■■□□□ 1.75
CLDND1-202ENST00000394180 NEK4P51957 841 aa26■■□□□ 1.75
CLDND1-202ENST00000394180 HSP90AB2PQ58FF8 381 aa26■■□□□ 1.75
CLDND1-202ENST00000394180 ARHGAP30Q7Z6I6 1101 aaPredicted RBP26■■□□□ 1.75
CLDND1-202ENST00000394180 PEAK1Q9H792 1746 aa26■■□□□ 1.75
CLDND1-202ENST00000394180 CDK12Q9NYV4 1490 aaPredicted RBP26■■□□□ 1.75
CLDND1-202ENST00000394180 OSBPL3Q9H4L5 887 aa25.99■■□□□ 1.75
CLDND1-202ENST00000394180 ALS2Q96Q42 1657 aa25.99■■□□□ 1.75
CLDND1-202ENST00000394180 EFCC1Q9HA90 598 aa25.99■■□□□ 1.75
CLDND1-202ENST00000394180 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.99■■□□□ 1.75
CLDND1-202ENST00000394180 SBNO1A3KN83 1393 aa25.98■■□□□ 1.75
CLDND1-202ENST00000394180 RPAP2Q8IXW5 612 aaPredicted RBP25.98■■□□□ 1.75
CLDND1-202ENST00000394180 CHAMP1Q96JM3 812 aa25.98■■□□□ 1.75
CLDND1-202ENST00000394180 ATP6V1DQ9Y5K8 247 aa25.98■■□□□ 1.75
CLDND1-202ENST00000394180 YY1AP1Q9H869 796 aa25.98■■□□□ 1.75
CLDND1-202ENST00000394180 TNS3Q68CZ2 1445 aa25.97■■□□□ 1.75
CLDND1-202ENST00000394180 SOS2Q07890 1332 aaPredicted RBP25.97■■□□□ 1.75
CLDND1-202ENST00000394180 SPATA31A3Q5VYP0 1347 aa25.97■■□□□ 1.75
CLDND1-202ENST00000394180 ZBTB7CA1YPR0 619 aa25.97■■□□□ 1.75
CLDND1-202ENST00000394180 GCP02774 474 aa25.97■■□□□ 1.75
CLDND1-202ENST00000394180 CABLES1Q8TDN4 633 aa25.97■■□□□ 1.75
CLDND1-202ENST00000394180 AMPHP49418 695 aa25.96■■□□□ 1.75
CLDND1-202ENST00000394180 IRX3P78415 501 aaPredicted RBP25.96■■□□□ 1.75
CLDND1-202ENST00000394180 ANKRD44Q8N8A2 993 aa25.96■■□□□ 1.75
CLDND1-202ENST00000394180 KIF1BPQ96EK5 621 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms