RNA–Protein interactions for RNA: ENST00000393985.7

CXorf40A-202, Transcript of chromosome X open reading frame 40A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXorf40A, Length 1,148 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXorf40A-202ENST00000393985 RFC4P35249 363 aa23.62■■□□□ 1.37
CXorf40A-202ENST00000393985 BABAM1Q9NWV8 329 aa23.62■■□□□ 1.37
CXorf40A-202ENST00000393985 TSPYL4Q9UJ04 414 aa23.62■■□□□ 1.37
CXorf40A-202ENST00000393985 COL15A1P39059 1388 aa23.61■■□□□ 1.37
CXorf40A-202ENST00000393985 CALD1Q05682 793 aaKnown RBP23.6■■□□□ 1.37
CXorf40A-202ENST00000393985 MSL1Q68DK7 614 aa23.6■■□□□ 1.37
CXorf40A-202ENST00000393985 INTS5Q6P9B9 1019 aaKnown RBP23.6■■□□□ 1.37
CXorf40A-202ENST00000393985 SMIM5Q71RC9 77 aa23.6■■□□□ 1.37
CXorf40A-202ENST00000393985 NPM2Q86SE8 214 aaKnown RBP23.6■■□□□ 1.37
CXorf40A-202ENST00000393985 SGIP1Q9BQI5 828 aa23.6■■□□□ 1.37
CXorf40A-202ENST00000393985 MIS18AQ9NYP9 233 aa23.6■■□□□ 1.37
CXorf40A-202ENST00000393985 TRIM35Q9UPQ4 493 aa23.6■■□□□ 1.37
CXorf40A-202ENST00000393985 ZBTB1Q9Y2K1 713 aa23.6■■□□□ 1.37
CXorf40A-202ENST00000393985 ARHGEF1Q92888 912 aaKnown RBP23.59■■□□□ 1.37
CXorf40A-202ENST00000393985 ARXQ96QS3 562 aa23.59■■□□□ 1.37
CXorf40A-202ENST00000393985 SCN7AQ01118 1682 aa23.59■■□□□ 1.37
CXorf40A-202ENST00000393985 SOS1Q07889 1333 aaPredicted RBP23.59■■□□□ 1.37
CXorf40A-202ENST00000393985 BCORQ6W2J9 1755 aa23.56■■□□□ 1.36
CXorf40A-202ENST00000393985 CANXP27824 592 aaKnown RBP23.56■■□□□ 1.36
CXorf40A-202ENST00000393985 FAM9BQ8IZU0 186 aa23.56■■□□□ 1.36
CXorf40A-202ENST00000393985 A0A087WZG4 1122 aa23.55■■□□□ 1.36
CXorf40A-202ENST00000393985 ZPR1O75312 459 aa23.55■■□□□ 1.36
CXorf40A-202ENST00000393985 EIF4A1P60842 406 aaKnown RBP23.55■■□□□ 1.36
CXorf40A-202ENST00000393985 LAS1LQ9Y4W2 734 aaKnown RBP23.55■■□□□ 1.36
CXorf40A-202ENST00000393985 USP42Q9H9J4 1324 aaKnown RBP23.55■■□□□ 1.36
CXorf40A-202ENST00000393985 NLGN1Q8N2Q7 840 aa23.54■■□□□ 1.36
CXorf40A-202ENST00000393985 ZNF330Q9Y3S2 320 aaPredicted RBP23.54■■□□□ 1.36
CXorf40A-202ENST00000393985 IL6STP40189 918 aaPredicted RBP23.53■■□□□ 1.36
CXorf40A-202ENST00000393985 DIEXFQ68CQ4 756 aaKnown RBP23.53■■□□□ 1.36
CXorf40A-202ENST00000393985 USP16Q9Y5T5 823 aa23.52■■□□□ 1.36
CXorf40A-202ENST00000393985 PRAMEF22A3QJZ6 481 aa23.51■■□□□ 1.35
CXorf40A-202ENST00000393985 CCER2I3L3R5 266 aa23.51■■□□□ 1.35
CXorf40A-202ENST00000393985 GIGYF1O75420 1035 aaPredicted RBP23.51■■□□□ 1.35
CXorf40A-202ENST00000393985 GYS1P13807 737 aa23.51■■□□□ 1.35
CXorf40A-202ENST00000393985 CCDC27Q2M243 656 aa23.51■■□□□ 1.35
CXorf40A-202ENST00000393985 NCBP3Q53F19 620 aaKnown RBP23.51■■□□□ 1.35
CXorf40A-202ENST00000393985 KLHL34Q8N239 644 aa23.51■■□□□ 1.35
CXorf40A-202ENST00000393985 CFAP44Q96MT7 982 aa23.51■■□□□ 1.35
CXorf40A-202ENST00000393985 CHL1O00533 1208 aa23.5■■□□□ 1.35
CXorf40A-202ENST00000393985 A1BGP04217 495 aa23.5■■□□□ 1.35
CXorf40A-202ENST00000393985 EIF5P55010 431 aaKnown RBP23.5■■□□□ 1.35
CXorf40A-202ENST00000393985 GNAI1P63096 354 aa23.5■■□□□ 1.35
CXorf40A-202ENST00000393985 FHDC1Q9C0D6 1143 aaPredicted RBP23.5■■□□□ 1.35
CXorf40A-202ENST00000393985 IFT57Q9NWB7 429 aa23.5■■□□□ 1.35
CXorf40A-202ENST00000393985 NARFQ9UHQ1 456 aa23.5■■□□□ 1.35
CXorf40A-202ENST00000393985 SRP68Q9UHB9 627 aaKnown RBP23.49■■□□□ 1.35
CXorf40A-202ENST00000393985 KIF13BQ9NQT8 1826 aa23.49■■□□□ 1.35
CXorf40A-202ENST00000393985 MMP10P09238 476 aa23.48■■□□□ 1.35
CXorf40A-202ENST00000393985 USPL1Q5W0Q7 1092 aa23.48■■□□□ 1.35
CXorf40A-202ENST00000393985 NGEFQ8N5V2 710 aa23.47■■□□□ 1.35
CXorf40A-202ENST00000393985 ERBB4Q15303 1308 aa23.47■■□□□ 1.35
CXorf40A-202ENST00000393985 AFDNP55196 1824 aaKnown RBP23.46■■□□□ 1.35
CXorf40A-202ENST00000393985 SYT17Q9BSW7 474 aa23.46■■□□□ 1.35
CXorf40A-202ENST00000393985 PARP3Q9Y6F1 533 aa23.46■■□□□ 1.35
CXorf40A-202ENST00000393985 DCAF8L1A6NGE4 600 aa23.45■■□□□ 1.34
CXorf40A-202ENST00000393985 PIP4K2AP48426 406 aaPredicted RBP23.44■■□□□ 1.34
CXorf40A-202ENST00000393985 DZIP3Q86Y13 1208 aaKnown RBP23.44■■□□□ 1.34
CXorf40A-202ENST00000393985 WWC1Q8IX03 1113 aa23.44■■□□□ 1.34
CXorf40A-202ENST00000393985 MBIPQ9NS73 344 aa23.44■■□□□ 1.34
CXorf40A-202ENST00000393985 HOXB7P09629 217 aa23.43■■□□□ 1.34
CXorf40A-202ENST00000393985 ZNF853P0CG23 659 aa23.43■■□□□ 1.34
CXorf40A-202ENST00000393985 FKBP8Q14318 412 aa23.43■■□□□ 1.34
CXorf40A-202ENST00000393985 IL16Q14005 1332 aa23.42■■□□□ 1.34
CXorf40A-202ENST00000393985 SENP3-EIF4A1A0A087X0R7 540 aa23.42■■□□□ 1.34
CXorf40A-202ENST00000393985 TBC1D2BQ9UPU7 963 aa23.42■■□□□ 1.34
CXorf40A-202ENST00000393985 ZNF652Q9Y2D9 606 aa23.42■■□□□ 1.34
CXorf40A-202ENST00000393985 CD2APQ9Y5K6 639 aa23.42■■□□□ 1.34
CXorf40A-202ENST00000393985 NUP98P52948 1817 aa23.42■■□□□ 1.34
CXorf40A-202ENST00000393985 NRXN2Q9P2S2 1712 aa23.42■■□□□ 1.34
CXorf40A-202ENST00000393985 EIF2S2P20042 333 aaKnown RBP23.41■■□□□ 1.34
CXorf40A-202ENST00000393985 NBPF26B4DH59 902 aa23.4■■□□□ 1.34
CXorf40A-202ENST00000393985 NBPF10Q6P3W6 841 aaKnown RBP23.4■■□□□ 1.34
CXorf40A-202ENST00000393985 NBPF15Q8N660 670 aa23.4■■□□□ 1.34
CXorf40A-202ENST00000393985 SALL2Q9Y467 1007 aaPredicted RBP23.4■■□□□ 1.34
CXorf40A-202ENST00000393985 C10orf71Q711Q0 1435 aa23.4■■□□□ 1.34
CXorf40A-202ENST00000393985 MYL6BP14649 208 aa23.39■■□□□ 1.33
CXorf40A-202ENST00000393985 KIF6Q6ZMV9 814 aa23.38■■□□□ 1.33
CXorf40A-202ENST00000393985 CHMP4AQ9BY43 222 aa23.38■■□□□ 1.33
CXorf40A-202ENST00000393985 N4BP2Q86UW6 1770 aaPredicted RBP23.37■■□□□ 1.33
CXorf40A-202ENST00000393985 RGL2O15211 777 aa23.37■■□□□ 1.33
CXorf40A-202ENST00000393985 CAMTA2O94983 1202 aa23.37■■□□□ 1.33
CXorf40A-202ENST00000393985 KRT24Q2M2I5 525 aa23.37■■□□□ 1.33
CXorf40A-202ENST00000393985 HDGFL1Q5TGJ6 251 aa23.37■■□□□ 1.33
CXorf40A-202ENST00000393985 WDR63Q8IWG1 891 aa23.37■■□□□ 1.33
CXorf40A-202ENST00000393985 BCL2L12Q9HB09 334 aa23.37■■□□□ 1.33
CXorf40A-202ENST00000393985 CARMIL3Q8ND23 1372 aa23.37■■□□□ 1.33
CXorf40A-202ENST00000393985 ANKRD36CQ5JPF3 1778 aa23.37■■□□□ 1.33
CXorf40A-202ENST00000393985 KIAA1551Q9HCM1 1747 aa23.36■■□□□ 1.33
CXorf40A-202ENST00000393985 POLRMTO00411 1230 aaKnown RBP23.36■■□□□ 1.33
CXorf40A-202ENST00000393985 NFIXQ14938 502 aa23.36■■□□□ 1.33
CXorf40A-202ENST00000393985 CLEC4GQ6UXB4 293 aa23.36■■□□□ 1.33
CXorf40A-202ENST00000393985 TM4SF1P30408 202 aa23.35■■□□□ 1.33
CXorf40A-202ENST00000393985 DDR1Q08345 913 aa23.35■■□□□ 1.33
CXorf40A-202ENST00000393985 DUSP27Q5VZP5 1158 aa23.35■■□□□ 1.33
CXorf40A-202ENST00000393985 BICDL1Q6ZP65 573 aa23.35■■□□□ 1.33
CXorf40A-202ENST00000393985 NECTIN2Q92692 538 aa23.35■■□□□ 1.33
CXorf40A-202ENST00000393985 CACNA1FO60840 1977 aa23.34■■□□□ 1.33
CXorf40A-202ENST00000393985 NLGN2Q8NFZ4 835 aa23.34■■□□□ 1.33
CXorf40A-202ENST00000393985 BRCA1P38398 1863 aaKnown RBP23.33■■□□□ 1.33
CXorf40A-202ENST00000393985 TBC1D9BQ66K14 1250 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms