RNA–Protein interactions for RNA: ENST00000393328.6

SPOP-202, Transcript of speckle type BTB/POZ protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPOP, Length 2,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-202ENST00000393328 BMP2KLQ5H9B9 411 aa13.77□□□□□ -0.21
SPOP-202ENST00000393328 KCNH5Q8NCM2 988 aa13.77□□□□□ -0.21
SPOP-202ENST00000393328 BCL11BQ9C0K0 894 aaPredicted RBP13.77□□□□□ -0.21
SPOP-202ENST00000393328 GDPD2Q9HCC8 539 aa13.77□□□□□ -0.21
SPOP-202ENST00000393328 LMBRD1Q9NUN5 540 aa13.77□□□□□ -0.21
SPOP-202ENST00000393328 PLEKHM2Q8IWE5 1019 aa13.77□□□□□ -0.21
SPOP-202ENST00000393328 DCTPP1Q9H773 170 aa13.77□□□□□ -0.21
SPOP-202ENST00000393328 PTPRCP08575 1304 aa13.76□□□□□ -0.21
SPOP-202ENST00000393328 ARHGEF25Q86VW2 580 aa13.76□□□□□ -0.21
SPOP-202ENST00000393328 BTBD11A6QL63 1104 aa13.76□□□□□ -0.21
SPOP-202ENST00000393328 CSB-PGBD3P0DP91 1061 aa13.76□□□□□ -0.21
SPOP-202ENST00000393328 CHPF2Q9P2E5 772 aa13.76□□□□□ -0.21
SPOP-202ENST00000393328 PNMA6EA0A0J9YXQ4 647 aa13.75□□□□□ -0.21
SPOP-202ENST00000393328 PLCB2Q00722 1185 aa13.75□□□□□ -0.21
SPOP-202ENST00000393328 C19orf44Q9H6X5 657 aa13.75□□□□□ -0.21
SPOP-202ENST00000393328 TMEM63CQ9P1W3 806 aa13.75□□□□□ -0.21
SPOP-202ENST00000393328 PRDM4Q9UKN5 801 aa13.75□□□□□ -0.21
SPOP-202ENST00000393328 SLC39A6Q13433 755 aa13.75□□□□□ -0.21
SPOP-202ENST00000393328 C1orf141Q5JVX7 400 aa13.75□□□□□ -0.21
SPOP-202ENST00000393328 LRRFIP2Q9Y608 721 aaKnown RBP13.75□□□□□ -0.21
SPOP-202ENST00000393328 PIP4K2AP48426 406 aaPredicted RBP13.74□□□□□ -0.21
SPOP-202ENST00000393328 NWD1Q149M9 1564 aa13.74□□□□□ -0.21
SPOP-202ENST00000393328 TMEM94Q12767 1356 aa13.74□□□□□ -0.21
SPOP-202ENST00000393328 ATP10DQ9P241 1426 aa13.73□□□□□ -0.21
SPOP-202ENST00000393328 AIMP1Q12904 312 aaKnown RBP13.73□□□□□ -0.21
SPOP-202ENST00000393328 PLEKHO1Q53GL0 409 aaPredicted RBP13.73□□□□□ -0.21
SPOP-202ENST00000393328 IGSF3O75054 1194 aa13.73□□□□□ -0.21
SPOP-202ENST00000393328 CDC45O75419 566 aa13.73□□□□□ -0.21
SPOP-202ENST00000393328 RPAP2Q8IXW5 612 aaPredicted RBP13.73□□□□□ -0.21
SPOP-202ENST00000393328 IL1RAPL2Q9NP60 686 aa13.73□□□□□ -0.21
SPOP-202ENST00000393328 RGPD2P0DJD1 1756 aa13.72□□□□□ -0.21
SPOP-202ENST00000393328 GNAI2P04899 355 aa13.72□□□□□ -0.21
SPOP-202ENST00000393328 CCT4P50991 539 aaKnown RBP13.72□□□□□ -0.21
SPOP-202ENST00000393328 EIF4A1P60842 406 aaKnown RBP13.72□□□□□ -0.21
SPOP-202ENST00000393328 PROSER3Q2NL68 480 aa13.72□□□□□ -0.21
SPOP-202ENST00000393328 NOL7Q9UMY1 257 aaKnown RBP13.72□□□□□ -0.21
SPOP-202ENST00000393328 MARF1Q9Y4F3 1742 aaKnown RBP13.72□□□□□ -0.21
SPOP-202ENST00000393328 LTN1O94822 1766 aa13.72□□□□□ -0.21
SPOP-202ENST00000393328 PI4KAP2A4QPH2 592 aa13.72□□□□□ -0.21
SPOP-202ENST00000393328 HTATSF1O43719 755 aaKnown RBP13.72□□□□□ -0.21
SPOP-202ENST00000393328 PI4KAP1Q8N8J0 262 aa13.72□□□□□ -0.21
SPOP-202ENST00000393328 ADAMTSL3P82987 1691 aa13.71□□□□□ -0.21
SPOP-202ENST00000393328 ZDHHC9Q9Y397 364 aa13.71□□□□□ -0.21
SPOP-202ENST00000393328 CBX1P83916 185 aa13.71□□□□□ -0.21
SPOP-202ENST00000393328 RNMTO43148 476 aaKnown RBP13.7□□□□□ -0.22
SPOP-202ENST00000393328 USP44Q9H0E7 712 aa13.7□□□□□ -0.22
SPOP-202ENST00000393328 ZKSCAN5Q9Y2L8 839 aa13.7□□□□□ -0.22
SPOP-202ENST00000393328 NBPF7P0C2Y1 421 aaPredicted RBP13.7□□□□□ -0.22
SPOP-202ENST00000393328 SDSP20132 328 aa13.7□□□□□ -0.22
SPOP-202ENST00000393328 DNAJC5Q9H3Z4 198 aa13.7□□□□□ -0.22
SPOP-202ENST00000393328 PXDNQ92626 1479 aa13.7□□□□□ -0.22
SPOP-202ENST00000393328 MAP4K4O95819 1239 aaPredicted RBP13.69□□□□□ -0.22
SPOP-202ENST00000393328 UBTFL1P0CB47 393 aaPredicted RBP13.69□□□□□ -0.22
SPOP-202ENST00000393328 ZNF445P59923 1031 aa13.69□□□□□ -0.22
SPOP-202ENST00000393328 AKAP4Q5JQC9 854 aa13.69□□□□□ -0.22
SPOP-202ENST00000393328 TTC22Q5TAA0 569 aa13.69□□□□□ -0.22
SPOP-202ENST00000393328 LARP6Q9BRS8 491 aaKnown RBP13.69□□□□□ -0.22
SPOP-202ENST00000393328 C1orf167Q5SNV9 1468 aa13.69□□□□□ -0.22
SPOP-202ENST00000393328 HMMRO75330 724 aa13.69□□□□□ -0.22
SPOP-202ENST00000393328 NFAT5O94916 1531 aa13.69□□□□□ -0.22
SPOP-202ENST00000393328 RAPGEF4Q8WZA2 1011 aa13.68□□□□□ -0.22
SPOP-202ENST00000393328 MYL6BP14649 208 aa13.68□□□□□ -0.22
SPOP-202ENST00000393328 TTC12Q9H892 705 aaPredicted RBP13.68□□□□□ -0.22
SPOP-202ENST00000393328 SPDYE4A6NLX3 237 aa13.68□□□□□ -0.22
SPOP-202ENST00000393328 NUCB2P80303 420 aa13.68□□□□□ -0.22
SPOP-202ENST00000393328 NUTM1Q86Y26 1132 aa13.68□□□□□ -0.22
SPOP-202ENST00000393328 RILPL2Q969X0 211 aa13.68□□□□□ -0.22
SPOP-202ENST00000393328 PTMSP20962 102 aa13.67□□□□□ -0.22
SPOP-202ENST00000393328 NEK4P51957 841 aa13.67□□□□□ -0.22
SPOP-202ENST00000393328 NFATC2IPQ8NCF5 419 aa13.67□□□□□ -0.22
SPOP-202ENST00000393328 USP26Q9BXU7 913 aa13.67□□□□□ -0.22
SPOP-202ENST00000393328 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.67□□□□□ -0.22
SPOP-202ENST00000393328 KIF24Q5T7B8 1368 aa13.67□□□□□ -0.22
SPOP-202ENST00000393328 RABEP1Q15276 862 aa13.67□□□□□ -0.22
SPOP-202ENST00000393328 CWF19L2Q2TBE0 894 aaKnown RBP13.67□□□□□ -0.22
SPOP-202ENST00000393328 SRCIN1Q9C0H9 1055 aa13.67□□□□□ -0.22
SPOP-202ENST00000393328 TRIM6-TRIM34B2RNG4 842 aa13.66□□□□□ -0.22
SPOP-202ENST00000393328 GADD45BO75293 160 aaPredicted RBP13.66□□□□□ -0.22
SPOP-202ENST00000393328 SURF6O75683 361 aaKnown RBP13.66□□□□□ -0.22
SPOP-202ENST00000393328 ERBB3P21860 1342 aa13.66□□□□□ -0.22
SPOP-202ENST00000393328 GNAI3P08754 354 aa13.66□□□□□ -0.22
SPOP-202ENST00000393328 PPP1R42Q7Z4L9 355 aa13.66□□□□□ -0.22
SPOP-202ENST00000393328 ZNF500O60304 480 aaPredicted RBP13.65□□□□□ -0.22
SPOP-202ENST00000393328 CEMIPQ8WUJ3 1361 aa13.65□□□□□ -0.22
SPOP-202ENST00000393328 SRGAP3O43295 1099 aa13.65□□□□□ -0.22
SPOP-202ENST00000393328 LRSAM1Q6UWE0 723 aa13.65□□□□□ -0.22
SPOP-202ENST00000393328 USP25Q9UHP3 1055 aa13.65□□□□□ -0.22
SPOP-202ENST00000393328 MAP3K2Q9Y2U5 619 aa13.65□□□□□ -0.22
SPOP-202ENST00000393328 PDE1AP54750 535 aa13.65□□□□□ -0.22
SPOP-202ENST00000393328 AMOTQ4VCS5 1084 aa13.65□□□□□ -0.22
SPOP-202ENST00000393328 DNAAF4Q8WXU2 420 aa13.65□□□□□ -0.22
SPOP-202ENST00000393328 PDLIM2Q96JY6 352 aa13.65□□□□□ -0.22
SPOP-202ENST00000393328 UPF3BQ9BZI7 483 aaKnown RBP13.65□□□□□ -0.22
SPOP-202ENST00000393328 ATP8B2P98198 1209 aa13.64□□□□□ -0.23
SPOP-202ENST00000393328 LRRCC1Q9C099 1032 aa13.64□□□□□ -0.23
SPOP-202ENST00000393328 ZNF142P52746 1687 aaPredicted RBP13.64□□□□□ -0.23
SPOP-202ENST00000393328 ST18O60284 1047 aa13.64□□□□□ -0.23
SPOP-202ENST00000393328 GIGYF1O75420 1035 aaPredicted RBP13.63□□□□□ -0.23
SPOP-202ENST00000393328 SASS6Q6UVJ0 657 aa13.63□□□□□ -0.23
SPOP-202ENST00000393328 CCDC39Q9UFE4 941 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms