RNA–Protein interactions for RNA: ENST00000393324.7

ME3-202, Transcript of malic enzyme 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ME3, Length 2,240 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-202ENST00000393324 COL14A1Q05707 1796 aaKnown RBP25.24■■□□□ 1.63
ME3-202ENST00000393324 PDIA6Q15084 440 aa25.24■■□□□ 1.63
ME3-202ENST00000393324 NKX1-1Q15270 411 aaPredicted RBP25.24■■□□□ 1.63
ME3-202ENST00000393324 FMNL2Q96PY5 1086 aa25.24■■□□□ 1.63
ME3-202ENST00000393324 SHANK3Q9BYB0 1731 aa25.24■■□□□ 1.63
ME3-202ENST00000393324 SNRPA1P09661 255 aaKnown RBP25.24■■□□□ 1.63
ME3-202ENST00000393324 KSR2Q6VAB6 950 aa25.23■■□□□ 1.63
ME3-202ENST00000393324 DDRGK1Q96HY6 314 aa25.23■■□□□ 1.63
ME3-202ENST00000393324 MAP3K2Q9Y2U5 619 aa25.23■■□□□ 1.63
ME3-202ENST00000393324 ERVV-2B6SEH9 535 aa25.22■■□□□ 1.63
ME3-202ENST00000393324 ATP8B2P98198 1209 aa25.22■■□□□ 1.63
ME3-202ENST00000393324 BMP2KLQ5H9B9 411 aa25.22■■□□□ 1.63
ME3-202ENST00000393324 APBB1O00213 710 aa25.21■■□□□ 1.63
ME3-202ENST00000393324 PNMA6EA0A0J9YXQ4 647 aa25.21■■□□□ 1.63
ME3-202ENST00000393324 USP16Q9Y5T5 823 aa25.21■■□□□ 1.63
ME3-202ENST00000393324 DEKP35659 375 aaKnown RBP25.2■■□□□ 1.62
ME3-202ENST00000393324 UPF2Q9HAU5 1272 aaKnown RBP25.2■■□□□ 1.62
ME3-202ENST00000393324 DDX58O95786 925 aaKnown RBP25.2■■□□□ 1.62
ME3-202ENST00000393324 AIMP1Q12904 312 aaKnown RBP25.2■■□□□ 1.62
ME3-202ENST00000393324 COL16A1Q07092 1604 aaPredicted RBP25.19■■□□□ 1.62
ME3-202ENST00000393324 MYL6BP14649 208 aa25.19■■□□□ 1.62
ME3-202ENST00000393324 PLEKHM2Q8IWE5 1019 aa25.19■■□□□ 1.62
ME3-202ENST00000393324 PHLPP1O60346 1717 aa25.19■■□□□ 1.62
ME3-202ENST00000393324 SMARCA5O60264 1052 aaPredicted RBP25.18■■□□□ 1.62
ME3-202ENST00000393324 NBPF7P0C2Y1 421 aaPredicted RBP25.18■■□□□ 1.62
ME3-202ENST00000393324 C16orf71Q8IYS4 520 aaPredicted RBP25.18■■□□□ 1.62
ME3-202ENST00000393324 ALDH1L1O75891 902 aa25.17■■□□□ 1.62
ME3-202ENST00000393324 EXOC6BQ9Y2D4 811 aa25.17■■□□□ 1.62
ME3-202ENST00000393324 XAGE3Q8WTP9 111 aa25.14■■□□□ 1.62
ME3-202ENST00000393324 GLI3P10071 1580 aa25.14■■□□□ 1.62
ME3-202ENST00000393324 COPS6Q7L5N1 327 aa25.14■■□□□ 1.61
ME3-202ENST00000393324 RIC3Q7Z5B4 369 aa25.14■■□□□ 1.61
ME3-202ENST00000393324 OTUD7AQ8TE49 926 aaPredicted RBP25.14■■□□□ 1.61
ME3-202ENST00000393324 TOM1O60784 492 aa25.13■■□□□ 1.61
ME3-202ENST00000393324 PIP4K2BP78356 416 aa25.13■■□□□ 1.61
ME3-202ENST00000393324 CWF19L2Q2TBE0 894 aaKnown RBP25.13■■□□□ 1.61
ME3-202ENST00000393324 LINS1Q8NG48 757 aa25.13■■□□□ 1.61
ME3-202ENST00000393324 SSH3Q8TE77 659 aa25.13■■□□□ 1.61
ME3-202ENST00000393324 PPP1R42Q7Z4L9 355 aa25.13■■□□□ 1.61
ME3-202ENST00000393324 C9orf78Q9NZ63 289 aaPredicted RBP25.13■■□□□ 1.61
ME3-202ENST00000393324 LAMB4A4D0S4 1761 aa25.13■■□□□ 1.61
ME3-202ENST00000393324 UBR2Q8IWV8 1755 aa25.13■■□□□ 1.61
ME3-202ENST00000393324 PIP4K2AP48426 406 aaPredicted RBP25.12■■□□□ 1.61
ME3-202ENST00000393324 LRP10Q7Z4F1 713 aa25.12■■□□□ 1.61
ME3-202ENST00000393324 TBC1D32Q96NH3 1257 aa25.12■■□□□ 1.61
ME3-202ENST00000393324 ADAMTS2O95450 1211 aa25.12■■□□□ 1.61
ME3-202ENST00000393324 MFAP1P55081 439 aaKnown RBP25.12■■□□□ 1.61
ME3-202ENST00000393324 DISP2A7MBM2 1401 aa25.11■■□□□ 1.61
ME3-202ENST00000393324 TOGARAM1Q9Y4F4 1720 aa25.11■■□□□ 1.61
ME3-202ENST00000393324 IBTKQ9P2D0 1353 aaPredicted RBP25.11■■□□□ 1.61
ME3-202ENST00000393324 PAPPAQ13219 1627 aa25.11■■□□□ 1.61
ME3-202ENST00000393324 GSPT1P15170 499 aaKnown RBP25.1■■□□□ 1.61
ME3-202ENST00000393324 LRRCC1Q9C099 1032 aa25.1■■□□□ 1.61
ME3-202ENST00000393324 TTC22Q5TAA0 569 aa25.1■■□□□ 1.61
ME3-202ENST00000393324 SRGAP3O43295 1099 aa25.09■■□□□ 1.61
ME3-202ENST00000393324 POLA2Q14181 598 aa25.09■■□□□ 1.61
ME3-202ENST00000393324 TMOD3Q9NYL9 352 aa25.09■■□□□ 1.61
ME3-202ENST00000393324 KCPQ6ZWJ8 1503 aa25.09■■□□□ 1.61
ME3-202ENST00000393324 PTCD1O75127 700 aaKnown RBP25.09■■□□□ 1.61
ME3-202ENST00000393324 ANKRD13DQ6ZTN6 518 aa25.09■■□□□ 1.61
ME3-202ENST00000393324 NEXNQ0ZGT2 675 aa25.08■■□□□ 1.61
ME3-202ENST00000393324 PLCH1Q4KWH8 1693 aa25.08■■□□□ 1.6
ME3-202ENST00000393324 HDAC5Q9UQL6 1122 aa25.08■■□□□ 1.6
ME3-202ENST00000393324 IGKV5-2P06315 115 aa25.07■■□□□ 1.6
ME3-202ENST00000393324 GRM8O00222 908 aa25.06■■□□□ 1.6
ME3-202ENST00000393324 METTL22Q9BUU2 404 aaPredicted RBP25.06■■□□□ 1.6
ME3-202ENST00000393324 ERBB4Q15303 1308 aa25.06■■□□□ 1.6
ME3-202ENST00000393324 TNS2Q63HR2 1409 aa25.06■■□□□ 1.6
ME3-202ENST00000393324 C22orf23Q9BZE7 217 aa25.06■■□□□ 1.6
ME3-202ENST00000393324 DAXXQ9UER7 740 aaPredicted RBP25.06■■□□□ 1.6
ME3-202ENST00000393324 SURF6O75683 361 aaKnown RBP25.05■■□□□ 1.6
ME3-202ENST00000393324 TBC1D9Q6ZT07 1266 aa25.05■■□□□ 1.6
ME3-202ENST00000393324 NUTM2BA6NNL0 878 aaPredicted RBP25.05■■□□□ 1.6
ME3-202ENST00000393324 NUTM2EB1AL46 878 aaPredicted RBP25.05■■□□□ 1.6
ME3-202ENST00000393324 EXOC5O00471 708 aa25.05■■□□□ 1.6
ME3-202ENST00000393324 NUTM2AQ8IVF1 878 aaPredicted RBP25.05■■□□□ 1.6
ME3-202ENST00000393324 MYD88Q99836 296 aa25.05■■□□□ 1.6
ME3-202ENST00000393324 UTYO14607 1347 aa25.05■■□□□ 1.6
ME3-202ENST00000393324 NBPF26B4DH59 902 aa25.04■■□□□ 1.6
ME3-202ENST00000393324 SLC4A3P48751 1232 aa25.04■■□□□ 1.6
ME3-202ENST00000393324 MTX1Q13505 466 aa25.04■■□□□ 1.6
ME3-202ENST00000393324 NBPF14Q5TI25 921 aa25.04■■□□□ 1.6
ME3-202ENST00000393324 NBPF10Q6P3W6 841 aaKnown RBP25.04■■□□□ 1.6
ME3-202ENST00000393324 NBPF15Q8N660 670 aa25.04■■□□□ 1.6
ME3-202ENST00000393324 KAT6BQ8WYB5 2073 aa25.04■■□□□ 1.6
ME3-202ENST00000393324 NEURL1BA8MQ27 555 aa25.04■■□□□ 1.6
ME3-202ENST00000393324 CDC45O75419 566 aa25.04■■□□□ 1.6
ME3-202ENST00000393324 OSBPL3Q9H4L5 887 aa25.04■■□□□ 1.6
ME3-202ENST00000393324 RAB11FIP3O75154 756 aa25.03■■□□□ 1.6
ME3-202ENST00000393324 PDE1AP54750 535 aa25.03■■□□□ 1.6
ME3-202ENST00000393324 PIGBQ92521 554 aa25.03■■□□□ 1.6
ME3-202ENST00000393324 ITGB4P16144 1822 aa25.03■■□□□ 1.6
ME3-202ENST00000393324 WNK3Q9BYP7 1800 aa25.02■■□□□ 1.6
ME3-202ENST00000393324 NRAPQ86VF7 1730 aa25.01■■□□□ 1.59
ME3-202ENST00000393324 A1BGP04217 495 aa25.01■■□□□ 1.59
ME3-202ENST00000393324 GCKRQ14397 625 aa25.01■■□□□ 1.59
ME3-202ENST00000393324 SUCLG2Q96I99 432 aa25.01■■□□□ 1.59
ME3-202ENST00000393324 ASAP1Q9ULH1 1129 aa25.01■■□□□ 1.59
ME3-202ENST00000393324 SALL3Q9BXA9 1300 aa25.01■■□□□ 1.59
ME3-202ENST00000393324 ARFGEF2Q9Y6D5 1785 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms