RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 KIF1BPQ96EK5 621 aa9.74□□□□□ -0.85
ATXN3-203ENST00000393287 ERBB3P21860 1342 aa9.74□□□□□ -0.85
ATXN3-203ENST00000393287 DIP2AQ14689 1571 aa9.74□□□□□ -0.85
ATXN3-203ENST00000393287 IFIT5Q13325 482 aaKnown RBP9.74□□□□□ -0.85
ATXN3-203ENST00000393287 NBR1Q14596 966 aa9.74□□□□□ -0.85
ATXN3-203ENST00000393287 VPS53Q5VIR6 699 aa9.74□□□□□ -0.85
ATXN3-203ENST00000393287 MYD88Q99836 296 aa9.74□□□□□ -0.85
ATXN3-203ENST00000393287 RICTORQ6R327 1708 aa9.74□□□□□ -0.85
ATXN3-203ENST00000393287 SETBP1Q9Y6X0 1596 aa9.74□□□□□ -0.85
ATXN3-203ENST00000393287 TTF1Q15361 905 aaPredicted RBP9.74□□□□□ -0.85
ATXN3-203ENST00000393287 CPS1P31327 1500 aa9.74□□□□□ -0.85
ATXN3-203ENST00000393287 WDHD1O75717 1129 aaPredicted RBP9.74□□□□□ -0.85
ATXN3-203ENST00000393287 CCDC152Q4G0S7 254 aa9.74□□□□□ -0.85
ATXN3-203ENST00000393287 SPTY2D1Q68D10 685 aaPredicted RBP9.74□□□□□ -0.85
ATXN3-203ENST00000393287 TRMT112Q9UI30 125 aaKnown RBP9.74□□□□□ -0.85
ATXN3-203ENST00000393287 PPP4R3BQ5MIZ7 849 aa9.73□□□□□ -0.85
ATXN3-203ENST00000393287 TULP4Q9NRJ4 1543 aa9.73□□□□□ -0.85
ATXN3-203ENST00000393287 CLSTN1O94985 981 aa9.73□□□□□ -0.85
ATXN3-203ENST00000393287 KRT27Q7Z3Y8 459 aa9.73□□□□□ -0.85
ATXN3-203ENST00000393287 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.73□□□□□ -0.85
ATXN3-203ENST00000393287 KRT32Q14532 448 aa9.73□□□□□ -0.85
ATXN3-203ENST00000393287 DDX46Q7L014 1031 aaKnown RBP9.73□□□□□ -0.85
ATXN3-203ENST00000393287 TFCP2L1Q9NZI6 479 aa9.73□□□□□ -0.85
ATXN3-203ENST00000393287 BICDL1Q6ZP65 573 aa9.73□□□□□ -0.85
ATXN3-203ENST00000393287 DNAJC2Q99543 621 aaKnown RBP9.73□□□□□ -0.85
ATXN3-203ENST00000393287 CCNL1Q9UK58 526 aaPredicted RBP9.73□□□□□ -0.85
ATXN3-203ENST00000393287 FLAD1Q8NFF5 587 aa9.73□□□□□ -0.85
ATXN3-203ENST00000393287 MIS18AQ9NYP9 233 aa9.73□□□□□ -0.85
ATXN3-203ENST00000393287 PIK3C2BO00750 1634 aa9.72□□□□□ -0.85
ATXN3-203ENST00000393287 RNMTO43148 476 aaKnown RBP9.72□□□□□ -0.85
ATXN3-203ENST00000393287 SRGAP3O43295 1099 aa9.72□□□□□ -0.85
ATXN3-203ENST00000393287 GSTO1P78417 241 aa9.72□□□□□ -0.85
ATXN3-203ENST00000393287 E9PCH4 1651 aa9.72□□□□□ -0.85
ATXN3-203ENST00000393287 NEXMIFQ5QGS0 1516 aa9.72□□□□□ -0.85
ATXN3-203ENST00000393287 ERVV-2B6SEH9 535 aa9.72□□□□□ -0.85
ATXN3-203ENST00000393287 SOS2Q07890 1332 aaPredicted RBP9.72□□□□□ -0.85
ATXN3-203ENST00000393287 METTL24Q5JXM2 366 aa9.72□□□□□ -0.85
ATXN3-203ENST00000393287 RTCBQ9Y3I0 505 aaKnown RBP9.72□□□□□ -0.85
ATXN3-203ENST00000393287 SEPT12Q8IYM1 358 aa9.72□□□□□ -0.85
ATXN3-203ENST00000393287 ZGPATQ8N5A5 531 aaKnown RBP9.72□□□□□ -0.85
ATXN3-203ENST00000393287 NFATC2IPQ8NCF5 419 aa9.72□□□□□ -0.85
ATXN3-203ENST00000393287 USP31Q70CQ4 1352 aa9.72□□□□□ -0.85
ATXN3-203ENST00000393287 APBA3O96018 575 aa9.72□□□□□ -0.85
ATXN3-203ENST00000393287 CFAP65Q6ZU64 1925 aaKnown RBP9.72□□□□□ -0.85
ATXN3-203ENST00000393287 CEP152O94986 1710 aa9.71□□□□□ -0.85
ATXN3-203ENST00000393287 CDCA7LQ96GN5 454 aa9.71□□□□□ -0.85
ATXN3-203ENST00000393287 LDHCP07864 332 aa9.71□□□□□ -0.85
ATXN3-203ENST00000393287 PDE4AP27815 886 aa9.71□□□□□ -0.85
ATXN3-203ENST00000393287 AACSQ86V21 672 aa9.71□□□□□ -0.86
ATXN3-203ENST00000393287 UQCRFS1P1P0C7P4 283 aa9.71□□□□□ -0.86
ATXN3-203ENST00000393287 FLIIQ13045 1269 aa9.71□□□□□ -0.86
ATXN3-203ENST00000393287 PRIM1P49642 420 aaKnown RBP9.71□□□□□ -0.86
ATXN3-203ENST00000393287 RARSP54136 660 aaKnown RBP9.71□□□□□ -0.86
ATXN3-203ENST00000393287 IPO9Q96P70 1041 aaKnown RBP9.71□□□□□ -0.86
ATXN3-203ENST00000393287 PARP3Q9Y6F1 533 aa9.71□□□□□ -0.86
ATXN3-203ENST00000393287 PTPRUQ92729 1446 aa9.7□□□□□ -0.86
ATXN3-203ENST00000393287 NUCB2P80303 420 aa9.7□□□□□ -0.86
ATXN3-203ENST00000393287 CCDC184Q52MB2 194 aa9.7□□□□□ -0.86
ATXN3-203ENST00000393287 SETDB2Q96T68 719 aa9.7□□□□□ -0.86
ATXN3-203ENST00000393287 LNPKQ9C0E8 428 aa9.7□□□□□ -0.86
ATXN3-203ENST00000393287 MBIPQ9NS73 344 aa9.7□□□□□ -0.86
ATXN3-203ENST00000393287 FAM83GA6ND36 823 aa9.7□□□□□ -0.86
ATXN3-203ENST00000393287 CDKL5O76039 1030 aa9.7□□□□□ -0.86
ATXN3-203ENST00000393287 PARP10Q53GL7 1025 aa9.7□□□□□ -0.86
ATXN3-203ENST00000393287 UTP14AQ9BVJ6 771 aaKnown RBP9.7□□□□□ -0.86
ATXN3-203ENST00000393287 GLRX3O76003 335 aaKnown RBP9.69□□□□□ -0.86
ATXN3-203ENST00000393287 RABEP1Q15276 862 aa9.69□□□□□ -0.86
ATXN3-203ENST00000393287 RSPH6AQ9H0K4 717 aa9.69□□□□□ -0.86
ATXN3-203ENST00000393287 CHD1LQ86WJ1 897 aa9.69□□□□□ -0.86
ATXN3-203ENST00000393287 SLC39A6Q13433 755 aa9.69□□□□□ -0.86
ATXN3-203ENST00000393287 ANKIB1Q9P2G1 1089 aa9.69□□□□□ -0.86
ATXN3-203ENST00000393287 SMC3Q9UQE7 1217 aa9.69□□□□□ -0.86
ATXN3-203ENST00000393287 TULP1O00294 542 aaPredicted RBP9.69□□□□□ -0.86
ATXN3-203ENST00000393287 MAP3K12Q12852 859 aa9.69□□□□□ -0.86
ATXN3-203ENST00000393287 NBPF5PQ86XG9 351 aaPredicted RBP9.69□□□□□ -0.86
ATXN3-203ENST00000393287 MAP3K2Q9Y2U5 619 aa9.69□□□□□ -0.86
ATXN3-203ENST00000393287 MYO3AQ8NEV4 1616 aa9.68□□□□□ -0.86
ATXN3-203ENST00000393287 PDCP20941 246 aa9.68□□□□□ -0.86
ATXN3-203ENST00000393287 CCDC178Q5BJE1 867 aa9.68□□□□□ -0.86
ATXN3-203ENST00000393287 WASF1Q92558 559 aa9.68□□□□□ -0.86
ATXN3-203ENST00000393287 RAI14Q9P0K7 980 aa9.68□□□□□ -0.86
ATXN3-203ENST00000393287 FER1L4A9Z1Z3 1794 aa9.68□□□□□ -0.86
ATXN3-203ENST00000393287 NRXN1Q9ULB1 1477 aa9.68□□□□□ -0.86
ATXN3-203ENST00000393287 BLMP54132 1417 aaPredicted RBP9.68□□□□□ -0.86
ATXN3-203ENST00000393287 ANKRD13DQ6ZTN6 518 aa9.68□□□□□ -0.86
ATXN3-203ENST00000393287 GJD4Q96KN9 370 aaPredicted RBP9.68□□□□□ -0.86
ATXN3-203ENST00000393287 ANKRD2Q9GZV1 360 aa9.68□□□□□ -0.86
ATXN3-203ENST00000393287 RAD21O60216 631 aa9.68□□□□□ -0.86
ATXN3-203ENST00000393287 TRAPPC3LQ5T215 181 aa9.68□□□□□ -0.86
ATXN3-203ENST00000393287 PHACTR3Q96KR7 559 aa9.68□□□□□ -0.86
ATXN3-203ENST00000393287 CCDC43Q96MW1 224 aaKnown RBP9.68□□□□□ -0.86
ATXN3-203ENST00000393287 VPS72Q15906 364 aa9.68□□□□□ -0.86
ATXN3-203ENST00000393287 SLC52A2Q9HAB3 445 aa9.68□□□□□ -0.86
ATXN3-203ENST00000393287 PDZRN3Q9UPQ7 1066 aa9.68□□□□□ -0.86
ATXN3-203ENST00000393287 IGSF1Q8N6C5 1336 aa9.68□□□□□ -0.86
ATXN3-203ENST00000393287 PHKG2P15735 406 aa9.68□□□□□ -0.86
ATXN3-203ENST00000393287 RBM5P52756 815 aaKnown RBP eCLIP9.68□□□□□ -0.86
ATXN3-203ENST00000393287 KSR2Q6VAB6 950 aa9.68□□□□□ -0.86
ATXN3-203ENST00000393287 RBM17Q96I25 401 aaKnown RBP9.68□□□□□ -0.86
ATXN3-203ENST00000393287 ZBTB3Q9H5J0 574 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms