RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 FAM98CQ17RN3 349 aaKnown RBP15.39■□□□□ 0.05
SPTBN1-203ENST00000389980 FNBP4Q8N3X1 1017 aaPredicted RBP15.39■□□□□ 0.05
SPTBN1-203ENST00000389980 PIGBQ92521 554 aa15.39■□□□□ 0.05
SPTBN1-203ENST00000389980 RWDD1Q9H446 243 aaPredicted RBP15.39■□□□□ 0.05
SPTBN1-203ENST00000389980 MYL6BP14649 208 aa15.39■□□□□ 0.05
SPTBN1-203ENST00000389980 MEX3CQ5U5Q3 659 aaKnown RBP15.39■□□□□ 0.05
SPTBN1-203ENST00000389980 SYTL4Q96C24 671 aaPredicted RBP15.39■□□□□ 0.05
SPTBN1-203ENST00000389980 MEIS3Q99687 375 aa15.39■□□□□ 0.05
SPTBN1-203ENST00000389980 CDCA7Q9BWT1 371 aaPredicted RBP15.39■□□□□ 0.05
SPTBN1-203ENST00000389980 CHMP4AQ9BY43 222 aa15.39■□□□□ 0.05
SPTBN1-203ENST00000389980 USP21Q9UK80 565 aa15.39■□□□□ 0.05
SPTBN1-203ENST00000389980 UBR2Q8IWV8 1755 aa15.39■□□□□ 0.05
SPTBN1-203ENST00000389980 ASAP1Q9ULH1 1129 aa15.38■□□□□ 0.05
SPTBN1-203ENST00000389980 PAPPAQ13219 1627 aa15.38■□□□□ 0.05
SPTBN1-203ENST00000389980 PI4KAP2A4QPH2 592 aa15.38■□□□□ 0.05
SPTBN1-203ENST00000389980 VPS72Q15906 364 aa15.38■□□□□ 0.05
SPTBN1-203ENST00000389980 BARGINQ6ZT62 677 aa15.38■□□□□ 0.05
SPTBN1-203ENST00000389980 PI4KAP1Q8N8J0 262 aa15.38■□□□□ 0.05
SPTBN1-203ENST00000389980 KCPQ6ZWJ8 1503 aa15.37■□□□□ 0.05
SPTBN1-203ENST00000389980 CCT4P50991 539 aaKnown RBP15.37■□□□□ 0.05
SPTBN1-203ENST00000389980 AIMP1Q12904 312 aaKnown RBP15.37■□□□□ 0.05
SPTBN1-203ENST00000389980 MARCH10Q8NA82 808 aaPredicted RBP15.37■□□□□ 0.05
SPTBN1-203ENST00000389980 CHMP4BQ9H444 224 aaKnown RBP15.37■□□□□ 0.05
SPTBN1-203ENST00000389980 DDX21Q9NR30 783 aaKnown RBP eCLIP15.37■□□□□ 0.05
SPTBN1-203ENST00000389980 A0A0G2JS52 829 aa15.36■□□□□ 0.05
SPTBN1-203ENST00000389980 ADCY9O60503 1353 aa15.36■□□□□ 0.05
SPTBN1-203ENST00000389980 DOT1LQ8TEK3 1739 aa15.36■□□□□ 0.05
SPTBN1-203ENST00000389980 RGS3P49796 1198 aa15.36■□□□□ 0.05
SPTBN1-203ENST00000389980 HDAC1Q13547 482 aaPredicted RBP15.36■□□□□ 0.05
SPTBN1-203ENST00000389980 SIRT2Q8IXJ6 389 aa15.36■□□□□ 0.05
SPTBN1-203ENST00000389980 HYPKQ9NX55 129 aa15.36■□□□□ 0.05
SPTBN1-203ENST00000389980 PRIM1P49642 420 aaKnown RBP15.35■□□□□ 0.05
SPTBN1-203ENST00000389980 ACSBG1Q96GR2 724 aa15.35■□□□□ 0.05
SPTBN1-203ENST00000389980 ATG3Q9NT62 314 aa15.35■□□□□ 0.05
SPTBN1-203ENST00000389980 DNAAF4Q8WXU2 420 aa15.35■□□□□ 0.05
SPTBN1-203ENST00000389980 BCL9O00512 1426 aa15.34■□□□□ 0.05
SPTBN1-203ENST00000389980 MAP3K2Q9Y2U5 619 aa15.34■□□□□ 0.05
SPTBN1-203ENST00000389980 LAMB4A4D0S4 1761 aa15.34■□□□□ 0.05
SPTBN1-203ENST00000389980 AFF2P51816 1311 aa15.34■□□□□ 0.05
SPTBN1-203ENST00000389980 N4BP2Q86UW6 1770 aaPredicted RBP15.34■□□□□ 0.05
SPTBN1-203ENST00000389980 PDZRN3Q9UPQ7 1066 aa15.34■□□□□ 0.05
SPTBN1-203ENST00000389980 LRP10Q7Z4F1 713 aa15.33■□□□□ 0.04
SPTBN1-203ENST00000389980 XAGE3Q8WTP9 111 aa15.33■□□□□ 0.04
SPTBN1-203ENST00000389980 RBM42Q9BTD8 480 aaKnown RBP15.33■□□□□ 0.04
SPTBN1-203ENST00000389980 BEND3Q5T5X7 828 aa15.32■□□□□ 0.04
SPTBN1-203ENST00000389980 COPS6Q7L5N1 327 aa15.32■□□□□ 0.04
SPTBN1-203ENST00000389980 PXDNLA1KZ92 1463 aa15.32■□□□□ 0.04
SPTBN1-203ENST00000389980 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.32■□□□□ 0.04
SPTBN1-203ENST00000389980 NBPF26B4DH59 902 aa15.32■□□□□ 0.04
SPTBN1-203ENST00000389980 A1BGP04217 495 aa15.32■□□□□ 0.04
SPTBN1-203ENST00000389980 NBPF14Q5TI25 921 aa15.32■□□□□ 0.04
SPTBN1-203ENST00000389980 NBPF10Q6P3W6 841 aaKnown RBP15.32■□□□□ 0.04
SPTBN1-203ENST00000389980 KSR2Q6VAB6 950 aa15.32■□□□□ 0.04
SPTBN1-203ENST00000389980 NBPF15Q8N660 670 aa15.32■□□□□ 0.04
SPTBN1-203ENST00000389980 SRCIN1Q9C0H9 1055 aa15.32■□□□□ 0.04
SPTBN1-203ENST00000389980 ATP10DQ9P241 1426 aa15.32■□□□□ 0.04
SPTBN1-203ENST00000389980 USP44Q9H0E7 712 aa15.31■□□□□ 0.04
SPTBN1-203ENST00000389980 CEP85Q6P2H3 762 aa15.31■□□□□ 0.04
SPTBN1-203ENST00000389980 DNAJC10Q8IXB1 793 aa15.3■□□□□ 0.04
SPTBN1-203ENST00000389980 SMC5Q8IY18 1101 aa15.3■□□□□ 0.04
SPTBN1-203ENST00000389980 SLC4A9Q96Q91 983 aa15.3■□□□□ 0.04
SPTBN1-203ENST00000389980 CWF19L2Q2TBE0 894 aaKnown RBP15.29■□□□□ 0.04
SPTBN1-203ENST00000389980 RIC3Q7Z5B4 369 aa15.29■□□□□ 0.04
SPTBN1-203ENST00000389980 KCNQ2O43526 872 aa15.29■□□□□ 0.04
SPTBN1-203ENST00000389980 DDX58O95786 925 aaKnown RBP15.29■□□□□ 0.04
SPTBN1-203ENST00000389980 FAM182BQ5T319 152 aa15.29■□□□□ 0.04
SPTBN1-203ENST00000389980 ANKRD44Q8N8A2 993 aa15.29■□□□□ 0.04
SPTBN1-203ENST00000389980 GJD4Q96KN9 370 aaPredicted RBP15.29■□□□□ 0.04
SPTBN1-203ENST00000389980 EP400Q96L91 3159 aa15.28■□□□□ 0.04
SPTBN1-203ENST00000389980 GNAI2P04899 355 aa15.28■□□□□ 0.04
SPTBN1-203ENST00000389980 LRRFIP2Q9Y608 721 aaKnown RBP15.28■□□□□ 0.04
SPTBN1-203ENST00000389980 GNAI3P08754 354 aa15.28■□□□□ 0.04
SPTBN1-203ENST00000389980 NBPF7P0C2Y1 421 aaPredicted RBP15.28■□□□□ 0.04
SPTBN1-203ENST00000389980 ANKRD13DQ6ZTN6 518 aa15.28■□□□□ 0.04
SPTBN1-203ENST00000389980 UBTFL1P0CB47 393 aaPredicted RBP15.27■□□□□ 0.04
SPTBN1-203ENST00000389980 RPAP2Q8IXW5 612 aaPredicted RBP15.27■□□□□ 0.04
SPTBN1-203ENST00000389980 TTLL7Q6ZT98 887 aa15.26■□□□□ 0.03
SPTBN1-203ENST00000389980 ZNF330Q9Y3S2 320 aaPredicted RBP15.26■□□□□ 0.03
SPTBN1-203ENST00000389980 VSIG10Q8N0Z9 540 aa15.26■□□□□ 0.03
SPTBN1-203ENST00000389980 MYD88Q99836 296 aa15.26■□□□□ 0.03
SPTBN1-203ENST00000389980 THSD7AQ9UPZ6 1657 aa15.26■□□□□ 0.03
SPTBN1-203ENST00000389980 IGKV5-2P06315 115 aa15.25■□□□□ 0.03
SPTBN1-203ENST00000389980 ANKRD45Q5TZF3 282 aa15.25■□□□□ 0.03
SPTBN1-203ENST00000389980 PTF1AQ7RTS3 328 aa15.25■□□□□ 0.03
SPTBN1-203ENST00000389980 LNPKQ9C0E8 428 aa15.25■□□□□ 0.03
SPTBN1-203ENST00000389980 ERBB4Q15303 1308 aa15.25■□□□□ 0.03
SPTBN1-203ENST00000389980 ARFGEF2Q9Y6D5 1785 aa15.25■□□□□ 0.03
SPTBN1-203ENST00000389980 ATRNO75882 1429 aa15.25■□□□□ 0.03
SPTBN1-203ENST00000389980 PDE4AP27815 886 aa15.25■□□□□ 0.03
SPTBN1-203ENST00000389980 TRPC5Q9UL62 973 aaPredicted RBP15.25■□□□□ 0.03
SPTBN1-203ENST00000389980 PNMA6EA0A0J9YXQ4 647 aa15.24■□□□□ 0.03
SPTBN1-203ENST00000389980 ALDH1L1O75891 902 aa15.24■□□□□ 0.03
SPTBN1-203ENST00000389980 NUCB1Q02818 461 aa15.24■□□□□ 0.03
SPTBN1-203ENST00000389980 LINS1Q8NG48 757 aa15.24■□□□□ 0.03
SPTBN1-203ENST00000389980 GCC1Q96CN9 775 aa15.24■□□□□ 0.03
SPTBN1-203ENST00000389980 METTL22Q9BUU2 404 aaPredicted RBP15.24■□□□□ 0.03
SPTBN1-203ENST00000389980 DCTPP1Q9H773 170 aa15.24■□□□□ 0.03
SPTBN1-203ENST00000389980 QTRT2Q9H974 415 aaKnown RBP15.24■□□□□ 0.03
SPTBN1-203ENST00000389980 C9orf78Q9NZ63 289 aaPredicted RBP15.24■□□□□ 0.03
SPTBN1-203ENST00000389980 APBB1O00213 710 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms