RNA–Protein interactions for RNA: ENST00000382041.7

NIN-203, Transcript of ninein, humanhuman

TSL 1 (best) BASIC

Gene NIN, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-203ENST00000382041 CCDC144CPQ8IYA2 1237 aa18.19■□□□□ 0.5
NIN-203ENST00000382041 TNRQ92752 1358 aa18.19■□□□□ 0.5
NIN-203ENST00000382041 LDHAL6AQ6ZMR3 332 aa18.18■□□□□ 0.5
NIN-203ENST00000382041 RPGRQ92834 1020 aaKnown RBP18.18■□□□□ 0.5
NIN-203ENST00000382041 ZNF213O14771 459 aa18.18■□□□□ 0.5
NIN-203ENST00000382041 HAND2P61296 217 aa18.18■□□□□ 0.5
NIN-203ENST00000382041 WASF1Q92558 559 aa18.18■□□□□ 0.5
NIN-203ENST00000382041 SEPT11Q9NVA2 429 aaKnown RBP18.18■□□□□ 0.5
NIN-203ENST00000382041 CIZ1Q9ULV3 898 aaPredicted RBP18.18■□□□□ 0.5
NIN-203ENST00000382041 NOM1Q5C9Z4 860 aaKnown RBP18.18■□□□□ 0.5
NIN-203ENST00000382041 CHPF2Q9P2E5 772 aa18.17■□□□□ 0.5
NIN-203ENST00000382041 CABLES1Q8TDN4 633 aa18.17■□□□□ 0.5
NIN-203ENST00000382041 ACSBG1Q96GR2 724 aa18.17■□□□□ 0.5
NIN-203ENST00000382041 SSFA2P28290 1259 aa18.17■□□□□ 0.5
NIN-203ENST00000382041 HSP90AB3PQ58FF7 597 aa18.17■□□□□ 0.5
NIN-203ENST00000382041 C6orf229H3BNL8 230 aa18.17■□□□□ 0.5
NIN-203ENST00000382041 TBC1D9Q6ZT07 1266 aa18.17■□□□□ 0.5
NIN-203ENST00000382041 BMP2KQ9NSY1 1161 aaPredicted RBP18.17■□□□□ 0.5
NIN-203ENST00000382041 CWC25Q9NXE8 425 aaPredicted RBP18.16■□□□□ 0.5
NIN-203ENST00000382041 GDPD2Q9HCC8 539 aa18.16■□□□□ 0.5
NIN-203ENST00000382041 SEC63Q9UGP8 760 aaKnown RBP18.16■□□□□ 0.5
NIN-203ENST00000382041 CDR1P51861 262 aa18.15■□□□□ 0.5
NIN-203ENST00000382041 MAP3K11Q16584 847 aa18.15■□□□□ 0.5
NIN-203ENST00000382041 ECHDC1Q9NTX5 307 aa18.15■□□□□ 0.5
NIN-203ENST00000382041 KLHL10Q6JEL2 608 aa18.15■□□□□ 0.5
NIN-203ENST00000382041 PAF1Q8N7H5 531 aa18.15■□□□□ 0.5
NIN-203ENST00000382041 C8orf76Q96K31 380 aa18.15■□□□□ 0.5
NIN-203ENST00000382041 MEIS3Q99687 375 aa18.15■□□□□ 0.5
NIN-203ENST00000382041 ATP10BO94823 1461 aa18.15■□□□□ 0.5
NIN-203ENST00000382041 MATR3P43243 847 aaKnown RBP eCLIP18.15■□□□□ 0.5
NIN-203ENST00000382041 TBC1D2Q9BYX2 928 aa18.15■□□□□ 0.5
NIN-203ENST00000382041 SLC12A7Q9Y666 1083 aa18.15■□□□□ 0.5
NIN-203ENST00000382041 NSD2O96028 1365 aa18.15■□□□□ 0.5
NIN-203ENST00000382041 CHMP4BP1P59074 171 aa18.15■□□□□ 0.5
NIN-203ENST00000382041 LRRC59Q96AG4 307 aaKnown RBP18.15■□□□□ 0.5
NIN-203ENST00000382041 GOLGA8BA8MQT2 603 aa18.14■□□□□ 0.5
NIN-203ENST00000382041 IFIT3O14879 490 aaKnown RBP18.14■□□□□ 0.5
NIN-203ENST00000382041 CCP110O43303 1012 aa18.14■□□□□ 0.49
NIN-203ENST00000382041 CCDC96Q2M329 555 aa18.14■□□□□ 0.49
NIN-203ENST00000382041 ZNF444Q8N0Y2 327 aaPredicted RBP18.14■□□□□ 0.49
NIN-203ENST00000382041 ANKRD36BQ8N2N9 1353 aa18.14■□□□□ 0.49
NIN-203ENST00000382041 CFAP100Q494V2 611 aa18.13■□□□□ 0.49
NIN-203ENST00000382041 PPIP5K1Q6PFW1 1433 aa18.13■□□□□ 0.49
NIN-203ENST00000382041 ASXL2Q76L83 1435 aa18.13■□□□□ 0.49
NIN-203ENST00000382041 SNRPA1P09661 255 aaKnown RBP18.13■□□□□ 0.49
NIN-203ENST00000382041 CADPS2Q86UW7 1296 aa18.13■□□□□ 0.49
NIN-203ENST00000382041 CTCFLQ8NI51 663 aaPredicted RBP18.13■□□□□ 0.49
NIN-203ENST00000382041 EVI5LQ96CN4 794 aa18.13■□□□□ 0.49
NIN-203ENST00000382041 PIK3R4Q99570 1358 aa18.12■□□□□ 0.49
NIN-203ENST00000382041 ANKRD13DQ6ZTN6 518 aa18.12■□□□□ 0.49
NIN-203ENST00000382041 C8orf58Q8NAV2 365 aa18.12■□□□□ 0.49
NIN-203ENST00000382041 SYCP2Q9BX26 1530 aa18.12■□□□□ 0.49
NIN-203ENST00000382041 DDX46Q7L014 1031 aaKnown RBP18.12■□□□□ 0.49
NIN-203ENST00000382041 KRI1Q8N9T8 703 aaKnown RBP18.12■□□□□ 0.49
NIN-203ENST00000382041 TFIP11Q9UBB9 837 aaKnown RBP18.12■□□□□ 0.49
NIN-203ENST00000382041 IQSEC3Q9UPP2 1182 aaPredicted RBP18.12■□□□□ 0.49
NIN-203ENST00000382041 CBFA2T2O43439 604 aa18.12■□□□□ 0.49
NIN-203ENST00000382041 IQCA1Q86XH1 822 aa18.12■□□□□ 0.49
NIN-203ENST00000382041 ZNF287Q9HBT7 754 aa18.12■□□□□ 0.49
NIN-203ENST00000382041 LIMCH1Q9UPQ0 1083 aa18.12■□□□□ 0.49
NIN-203ENST00000382041 GOLGA8AA7E2F4 631 aa18.11■□□□□ 0.49
NIN-203ENST00000382041 XAGE3Q8WTP9 111 aa18.11■□□□□ 0.49
NIN-203ENST00000382041 NCKAP5LQ9HCH0 1330 aa18.11■□□□□ 0.49
NIN-203ENST00000382041 EIF5P55010 431 aaKnown RBP18.11■□□□□ 0.49
NIN-203ENST00000382041 TRMT1LQ7Z2T5 733 aaKnown RBP18.11■□□□□ 0.49
NIN-203ENST00000382041 CCDC181Q5TID7 509 aa18.11■□□□□ 0.49
NIN-203ENST00000382041 CKAP2LQ8IYA6 745 aa18.11■□□□□ 0.49
NIN-203ENST00000382041 CEP131Q9UPN4 1083 aa18.11■□□□□ 0.49
NIN-203ENST00000382041 RAPGEF6Q8TEU7 1601 aa18.11■□□□□ 0.49
NIN-203ENST00000382041 AXDND1Q5T1B0 1012 aaPredicted RBP18.1■□□□□ 0.49
NIN-203ENST00000382041 COPS6Q7L5N1 327 aa18.1■□□□□ 0.49
NIN-203ENST00000382041 TNNQ9UQP3 1299 aa18.1■□□□□ 0.49
NIN-203ENST00000382041 BIVM-ERCC5R4GMW8 1640 aa18.1■□□□□ 0.49
NIN-203ENST00000382041 EIF4A2Q14240 407 aaKnown RBP18.1■□□□□ 0.49
NIN-203ENST00000382041 VAT1LQ9HCJ6 419 aa18.1■□□□□ 0.49
NIN-203ENST00000382041 PLCH2O75038 1416 aa18.1■□□□□ 0.49
NIN-203ENST00000382041 CCDC112Q8NEF3 446 aa18.09■□□□□ 0.49
NIN-203ENST00000382041 KRT24Q2M2I5 525 aa18.09■□□□□ 0.49
NIN-203ENST00000382041 ERCC4Q92889 916 aaPredicted RBP18.09■□□□□ 0.49
NIN-203ENST00000382041 SH2B1Q9NRF2 756 aaPredicted RBP18.09■□□□□ 0.49
NIN-203ENST00000382041 TNPO1Q92973 898 aaKnown RBP18.09■□□□□ 0.49
NIN-203ENST00000382041 GJB2P29033 226 aa18.09■□□□□ 0.49
NIN-203ENST00000382041 MICU3Q86XE3 530 aa18.09■□□□□ 0.49
NIN-203ENST00000382041 ZCRB1Q8TBF4 217 aaKnown RBP18.09■□□□□ 0.49
NIN-203ENST00000382041 TTC22Q5TAA0 569 aa18.08■□□□□ 0.49
NIN-203ENST00000382041 UBA5Q9GZZ9 404 aa18.08■□□□□ 0.49
NIN-203ENST00000382041 PCDHB15Q9Y5E8 787 aa18.08■□□□□ 0.49
NIN-203ENST00000382041 RFC4P35249 363 aa18.08■□□□□ 0.48
NIN-203ENST00000382041 RHPN1Q8TCX5 695 aa18.08■□□□□ 0.48
NIN-203ENST00000382041 TCEANC2Q96MN5 208 aa18.08■□□□□ 0.48
NIN-203ENST00000382041 PANK2Q9BZ23 570 aa18.08■□□□□ 0.48
NIN-203ENST00000382041 CCDC196A0A1B0GTZ2 297 aa18.08■□□□□ 0.48
NIN-203ENST00000382041 SSRP1Q08945 709 aaKnown RBP18.08■□□□□ 0.48
NIN-203ENST00000382041 NLRP5P59047 1200 aa18.08■□□□□ 0.48
NIN-203ENST00000382041 ZNF622Q969S3 477 aaKnown RBP eCLIP18.08■□□□□ 0.48
NIN-203ENST00000382041 TRAPPC8Q9Y2L5 1435 aa18.08■□□□□ 0.48
NIN-203ENST00000382041 HMGB1P09429 215 aaKnown RBP18.07■□□□□ 0.48
NIN-203ENST00000382041 SMTNL1A8MU46 457 aa18.07■□□□□ 0.48
NIN-203ENST00000382041 LRRC2Q9BYS8 371 aa18.07■□□□□ 0.48
NIN-203ENST00000382041 WDR78Q5VTH9 848 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms