RNA–Protein interactions for RNA: ENST00000380142.4

CDKN2B-202, Transcript of cyclin dependent kinase inhibitor 2B, humanhuman

TSL 1 (best) BASIC

Gene CDKN2B, Length 859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2B-202ENST00000380142 KNSTRNQ9Y448 316 aa31.14■■■□□ 2.58
CDKN2B-202ENST00000380142 CCDC88AQ3V6T2 1871 aa31.13■■■□□ 2.57
CDKN2B-202ENST00000380142 RNMTO43148 476 aaKnown RBP31.13■■■□□ 2.57
CDKN2B-202ENST00000380142 TNRC6CQ9HCJ0 1690 aaKnown RBP31.12■■■□□ 2.57
CDKN2B-202ENST00000380142 HMOX1P09601 288 aa31.11■■■□□ 2.57
CDKN2B-202ENST00000380142 RBM46Q8TBY0 533 aaKnown RBP31.11■■■□□ 2.57
CDKN2B-202ENST00000380142 BCL2L12Q9HB09 334 aa31.11■■■□□ 2.57
CDKN2B-202ENST00000380142 RNF181Q9P0P0 153 aa31.11■■■□□ 2.57
CDKN2B-202ENST00000380142 HTRA3P83110 453 aa31.09■■■□□ 2.57
CDKN2B-202ENST00000380142 NFIXQ14938 502 aa31.09■■■□□ 2.57
CDKN2B-202ENST00000380142 ZBTB1Q9Y2K1 713 aa31.09■■■□□ 2.57
CDKN2B-202ENST00000380142 COL15A1P39059 1388 aa31.08■■■□□ 2.57
CDKN2B-202ENST00000380142 MTHFSDQ2M296 383 aaKnown RBP31.08■■■□□ 2.57
CDKN2B-202ENST00000380142 NARFQ9UHQ1 456 aa31.08■■■□□ 2.57
CDKN2B-202ENST00000380142 ZPR1O75312 459 aa31.07■■■□□ 2.56
CDKN2B-202ENST00000380142 PRELPP51888 382 aa31.06■■■□□ 2.56
CDKN2B-202ENST00000380142 ANKRD31Q8N7Z5 1873 aa31.06■■■□□ 2.56
CDKN2B-202ENST00000380142 RASSF7Q02833 373 aa31.05■■■□□ 2.56
CDKN2B-202ENST00000380142 RRAGCQ9HB90 399 aa31.05■■■□□ 2.56
CDKN2B-202ENST00000380142 KIF7Q2M1P5 1343 aa31.04■■■□□ 2.56
CDKN2B-202ENST00000380142 SIPA1L3O60292 1781 aaPredicted RBP31.04■■■□□ 2.56
CDKN2B-202ENST00000380142 CARMIL3Q8ND23 1372 aa31.03■■■□□ 2.56
CDKN2B-202ENST00000380142 KDM2BQ8NHM5 1336 aa31.02■■■□□ 2.56
CDKN2B-202ENST00000380142 TIAM2Q8IVF5 1701 aa31.01■■■□□ 2.56
CDKN2B-202ENST00000380142 PER1O15534 1290 aaPredicted RBP31.01■■■□□ 2.55
CDKN2B-202ENST00000380142 SERPINB2P05120 415 aa31■■■□□ 2.55
CDKN2B-202ENST00000380142 C16orf71Q8IYS4 520 aaPredicted RBP31■■■□□ 2.55
CDKN2B-202ENST00000380142 COL3A1P02461 1466 aaPredicted RBP31■■■□□ 2.55
CDKN2B-202ENST00000380142 FSTL1Q12841 308 aa30.99■■■□□ 2.55
CDKN2B-202ENST00000380142 VSIG10Q8N0Z9 540 aa30.99■■■□□ 2.55
CDKN2B-202ENST00000380142 SCN7AQ01118 1682 aa30.97■■■□□ 2.55
CDKN2B-202ENST00000380142 COL11A2P13942 1736 aaPredicted RBP30.97■■■□□ 2.55
CDKN2B-202ENST00000380142 DIAPH1O60610 1272 aaKnown RBP30.96■■■□□ 2.55
CDKN2B-202ENST00000380142 CANXP27824 592 aaKnown RBP30.96■■■□□ 2.55
CDKN2B-202ENST00000380142 KLRG1Q96E93 195 aa30.96■■■□□ 2.55
CDKN2B-202ENST00000380142 EIF5P55010 431 aaKnown RBP30.95■■■□□ 2.55
CDKN2B-202ENST00000380142 DICER1Q9UPY3 1922 aaKnown RBP30.94■■■□□ 2.54
CDKN2B-202ENST00000380142 CC2D1BQ5T0F9 858 aaKnown RBP30.93■■■□□ 2.54
CDKN2B-202ENST00000380142 C2CD5Q86YS7 1000 aa30.93■■■□□ 2.54
CDKN2B-202ENST00000380142 JMYQ8N9B5 988 aa30.93■■■□□ 2.54
CDKN2B-202ENST00000380142 FER1L6Q2WGJ9 1857 aa30.93■■■□□ 2.54
CDKN2B-202ENST00000380142 NFKBIEO00221 500 aa30.92■■■□□ 2.54
CDKN2B-202ENST00000380142 IL17REQ8NFR9 667 aa30.92■■■□□ 2.54
CDKN2B-202ENST00000380142 LMNB1P20700 586 aa30.91■■■□□ 2.54
CDKN2B-202ENST00000380142 BICDL1Q6ZP65 573 aa30.91■■■□□ 2.54
CDKN2B-202ENST00000380142 TTLL6Q8N841 843 aa30.91■■■□□ 2.54
CDKN2B-202ENST00000380142 ZNF496Q96IT1 587 aaPredicted RBP30.91■■■□□ 2.54
CDKN2B-202ENST00000380142 ZC3H4Q9UPT8 1303 aaKnown RBP30.91■■■□□ 2.54
CDKN2B-202ENST00000380142 TBC1D9BQ66K14 1250 aa30.9■■■□□ 2.54
CDKN2B-202ENST00000380142 CACNA1SQ13698 1873 aa30.9■■■□□ 2.54
CDKN2B-202ENST00000380142 CCER1Q8TC90 406 aaPredicted RBP30.89■■■□□ 2.54
CDKN2B-202ENST00000380142 HEG1Q9ULI3 1381 aa30.89■■■□□ 2.54
CDKN2B-202ENST00000380142 GLTPD2A6NH11 291 aa30.88■■■□□ 2.53
CDKN2B-202ENST00000380142 SMC1BQ8NDV3 1235 aa30.87■■■□□ 2.53
CDKN2B-202ENST00000380142 BCORQ6W2J9 1755 aa30.87■■■□□ 2.53
CDKN2B-202ENST00000380142 H0YIN7 160 aa30.86■■■□□ 2.53
CDKN2B-202ENST00000380142 CCDC24Q8N4L8 307 aa30.86■■■□□ 2.53
CDKN2B-202ENST00000380142 POTECB2RU33 542 aa30.85■■■□□ 2.53
CDKN2B-202ENST00000380142 STARD3NLO95772 234 aa30.85■■■□□ 2.53
CDKN2B-202ENST00000380142 ZNF790Q6PG37 636 aa30.85■■■□□ 2.53
CDKN2B-202ENST00000380142 TTC5Q8N0Z6 440 aa30.85■■■□□ 2.53
CDKN2B-202ENST00000380142 SLX4Q8IY92 1834 aa30.84■■■□□ 2.53
CDKN2B-202ENST00000380142 TBC1D2BQ9UPU7 963 aa30.84■■■□□ 2.53
CDKN2B-202ENST00000380142 COL13A1Q5TAT6 717 aaPredicted RBP30.83■■■□□ 2.53
CDKN2B-202ENST00000380142 PRR5LQ6MZQ0 368 aa30.83■■■□□ 2.53
CDKN2B-202ENST00000380142 A0A087WZG4 1122 aa30.82■■■□□ 2.52
CDKN2B-202ENST00000380142 GNAT3A8MTJ3 354 aa30.82■■■□□ 2.52
CDKN2B-202ENST00000380142 ARFGEF2Q9Y6D5 1785 aa30.82■■■□□ 2.52
CDKN2B-202ENST00000380142 KCNQ3O43525 872 aa30.81■■■□□ 2.52
CDKN2B-202ENST00000380142 VEGFAP15692 232 aaPredicted RBP30.81■■■□□ 2.52
CDKN2B-202ENST00000380142 NPC1L1Q9UHC9 1359 aa30.8■■■□□ 2.52
CDKN2B-202ENST00000380142 U2SURPO15042 1029 aaKnown RBP30.8■■■□□ 2.52
CDKN2B-202ENST00000380142 TEFQ10587 303 aa30.8■■■□□ 2.52
CDKN2B-202ENST00000380142 PCNTO95613 3336 aa30.8■■■□□ 2.52
CDKN2B-202ENST00000380142 CEMIPQ8WUJ3 1361 aa30.79■■■□□ 2.52
CDKN2B-202ENST00000380142 A1BGP04217 495 aa30.79■■■□□ 2.52
CDKN2B-202ENST00000380142 IL6STP40189 918 aaPredicted RBP30.79■■■□□ 2.52
CDKN2B-202ENST00000380142 GAS2L2Q8NHY3 880 aa30.79■■■□□ 2.52
CDKN2B-202ENST00000380142 BRIP1Q9BX63 1249 aa30.79■■■□□ 2.52
CDKN2B-202ENST00000380142 C21orf2O43822 256 aa30.78■■■□□ 2.52
CDKN2B-202ENST00000380142 CNGB1Q14028 1251 aaPredicted RBP30.78■■■□□ 2.52
CDKN2B-202ENST00000380142 ZNF622Q969S3 477 aaKnown RBP eCLIP30.78■■■□□ 2.52
CDKN2B-202ENST00000380142 PHACTR3Q96KR7 559 aa30.78■■■□□ 2.52
CDKN2B-202ENST00000380142 ZNF219Q9P2Y4 722 aaPredicted RBP30.78■■■□□ 2.52
CDKN2B-202ENST00000380142 ZNF330Q9Y3S2 320 aaPredicted RBP30.78■■■□□ 2.52
CDKN2B-202ENST00000380142 CAMTA2O94983 1202 aa30.77■■■□□ 2.52
CDKN2B-202ENST00000380142 TEX13AQ9BXU3 409 aaPredicted RBP30.76■■■□□ 2.51
CDKN2B-202ENST00000380142 PDE6BP35913 854 aa30.74■■■□□ 2.51
CDKN2B-202ENST00000380142 FMNL2Q96PY5 1086 aa30.74■■■□□ 2.51
CDKN2B-202ENST00000380142 PRAMEF22A3QJZ6 481 aa30.72■■■□□ 2.51
CDKN2B-202ENST00000380142 PDZRN3Q9UPQ7 1066 aa30.72■■■□□ 2.51
CDKN2B-202ENST00000380142 PIP4K2AP48426 406 aaPredicted RBP30.71■■■□□ 2.51
CDKN2B-202ENST00000380142 RSPH6AQ9H0K4 717 aa30.71■■■□□ 2.51
CDKN2B-202ENST00000380142 USP16Q9Y5T5 823 aa30.71■■■□□ 2.51
CDKN2B-202ENST00000380142 ERFEQ4G0M1 354 aa30.7■■■□□ 2.51
CDKN2B-202ENST00000380142 LTBP3Q9NS15 1303 aa30.7■■■□□ 2.5
CDKN2B-202ENST00000380142 SRGNP10124 158 aa30.69■■■□□ 2.5
CDKN2B-202ENST00000380142 PRKAR2BP31323 418 aa30.69■■■□□ 2.5
CDKN2B-202ENST00000380142 CNBD1Q8NA66 436 aa30.69■■■□□ 2.5
CDKN2B-202ENST00000380142 BTBD11A6QL63 1104 aa30.68■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms