RNA–Protein interactions for RNA: ENST00000379521.8

NFX1-202, Transcript of nuclear transcription factor, X-box binding 1, humanhuman

TSL 1 (best)

Gene NFX1, Length 3,609 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1-202ENST00000379521 ERBB4Q15303 1308 aa8.54□□□□□ -1.04
NFX1-202ENST00000379521 ALDH1L1O75891 902 aa8.53□□□□□ -1.04
NFX1-202ENST00000379521 CUL4AQ13619 759 aa8.53□□□□□ -1.04
NFX1-202ENST00000379521 RABL6Q3YEC7 729 aaPredicted RBP8.53□□□□□ -1.04
NFX1-202ENST00000379521 NGDNQ8NEJ9 315 aaKnown RBP8.53□□□□□ -1.04
NFX1-202ENST00000379521 ALDH8A1Q9H2A2 487 aaPredicted RBP8.53□□□□□ -1.04
NFX1-202ENST00000379521 LGR6Q9HBX8 967 aa8.53□□□□□ -1.04
NFX1-202ENST00000379521 SLC4A2P04920 1241 aa8.53□□□□□ -1.04
NFX1-202ENST00000379521 RGS3P49796 1198 aa8.53□□□□□ -1.04
NFX1-202ENST00000379521 ZNF646O15015 1829 aaPredicted RBP8.53□□□□□ -1.04
NFX1-202ENST00000379521 NHSQ6T4R5 1651 aa8.53□□□□□ -1.04
NFX1-202ENST00000379521 CDC45O75419 566 aa8.53□□□□□ -1.04
NFX1-202ENST00000379521 PDE1AP54750 535 aa8.53□□□□□ -1.04
NFX1-202ENST00000379521 RAB11FIP3O75154 756 aa8.52□□□□□ -1.05
NFX1-202ENST00000379521 ANAPC15P60006 121 aa8.52□□□□□ -1.05
NFX1-202ENST00000379521 CHMP4AQ9BY43 222 aa8.52□□□□□ -1.05
NFX1-202ENST00000379521 PNMA6EA0A0J9YXQ4 647 aa8.52□□□□□ -1.05
NFX1-202ENST00000379521 TSPYL4Q9UJ04 414 aa8.52□□□□□ -1.05
NFX1-202ENST00000379521 NPHP3Q7Z494 1330 aa8.52□□□□□ -1.05
NFX1-202ENST00000379521 SDSP20132 328 aa8.52□□□□□ -1.05
NFX1-202ENST00000379521 RFX5P48382 616 aaPredicted RBP8.52□□□□□ -1.05
NFX1-202ENST00000379521 GNAI3P08754 354 aa8.51□□□□□ -1.05
NFX1-202ENST00000379521 PHKG2P15735 406 aa8.51□□□□□ -1.05
NFX1-202ENST00000379521 SRCIN1Q9C0H9 1055 aa8.51□□□□□ -1.05
NFX1-202ENST00000379521 GNAI2P04899 355 aa8.51□□□□□ -1.05
NFX1-202ENST00000379521 NEFMP07197 916 aa8.51□□□□□ -1.05
NFX1-202ENST00000379521 CANXP27824 592 aaKnown RBP8.51□□□□□ -1.05
NFX1-202ENST00000379521 OTUD7AQ8TE49 926 aaPredicted RBP8.5□□□□□ -1.05
NFX1-202ENST00000379521 AMPHP49418 695 aa8.5□□□□□ -1.05
NFX1-202ENST00000379521 SLC52A2Q9HAB3 445 aa8.5□□□□□ -1.05
NFX1-202ENST00000379521 BCL9LQ86UU0 1499 aa8.5□□□□□ -1.05
NFX1-202ENST00000379521 RPAP1Q9BWH6 1393 aaPredicted RBP8.5□□□□□ -1.05
NFX1-202ENST00000379521 MAST2Q6P0Q8 1798 aa8.5□□□□□ -1.05
NFX1-202ENST00000379521 KRT28Q7Z3Y7 464 aa8.5□□□□□ -1.05
NFX1-202ENST00000379521 C16orf71Q8IYS4 520 aaPredicted RBP8.5□□□□□ -1.05
NFX1-202ENST00000379521 ANKRD24Q8TF21 1146 aa8.5□□□□□ -1.05
NFX1-202ENST00000379521 BCL9O00512 1426 aa8.5□□□□□ -1.05
NFX1-202ENST00000379521 CHD4Q14839 1912 aa8.5□□□□□ -1.05
NFX1-202ENST00000379521 TTC41PQ6P2S7 1318 aa8.5□□□□□ -1.05
NFX1-202ENST00000379521 DEKP35659 375 aaKnown RBP8.49□□□□□ -1.05
NFX1-202ENST00000379521 TSGA10IPQ3SY00 556 aa8.49□□□□□ -1.05
NFX1-202ENST00000379521 LNPKQ9C0E8 428 aa8.49□□□□□ -1.05
NFX1-202ENST00000379521 LTBP1Q14766 1721 aa8.49□□□□□ -1.05
NFX1-202ENST00000379521 MED23Q9ULK4 1368 aa8.49□□□□□ -1.05
NFX1-202ENST00000379521 KDM4FA0A1W2PPD8 638 aa8.49□□□□□ -1.05
NFX1-202ENST00000379521 TTC14Q96N46 770 aa8.49□□□□□ -1.05
NFX1-202ENST00000379521 KCNQ3O43525 872 aa8.49□□□□□ -1.05
NFX1-202ENST00000379521 PLEKHO1Q53GL0 409 aaPredicted RBP8.49□□□□□ -1.05
NFX1-202ENST00000379521 C1orf115Q9H7X2 142 aa8.49□□□□□ -1.05
NFX1-202ENST00000379521 MYO5AQ9Y4I1 1855 aaKnown RBP8.49□□□□□ -1.05
NFX1-202ENST00000379521 LRRC37AA6NMS7 1700 aa8.49□□□□□ -1.05
NFX1-202ENST00000379521 DDX21Q9NR30 783 aaKnown RBP eCLIP8.48□□□□□ -1.05
NFX1-202ENST00000379521 DDX60LQ5H9U9 1706 aaKnown RBP8.48□□□□□ -1.05
NFX1-202ENST00000379521 BRINP3Q76B58 766 aa8.48□□□□□ -1.05
NFX1-202ENST00000379521 ISY1Q9ULR0 285 aaKnown RBP8.48□□□□□ -1.05
NFX1-202ENST00000379521 ZDHHC9Q9Y397 364 aa8.48□□□□□ -1.05
NFX1-202ENST00000379521 WDR17Q8IZU2 1322 aa8.48□□□□□ -1.05
NFX1-202ENST00000379521 IGKV5-2P06315 115 aa8.48□□□□□ -1.05
NFX1-202ENST00000379521 CHMLP26374 656 aa8.48□□□□□ -1.05
NFX1-202ENST00000379521 BECN1Q14457 450 aa8.48□□□□□ -1.05
NFX1-202ENST00000379521 GSE1Q14687 1217 aa8.48□□□□□ -1.05
NFX1-202ENST00000379521 RABEP1Q15276 862 aa8.48□□□□□ -1.05
NFX1-202ENST00000379521 KSR2Q6VAB6 950 aa8.48□□□□□ -1.05
NFX1-202ENST00000379521 PHAXQ9H814 394 aaKnown RBP8.48□□□□□ -1.05
NFX1-202ENST00000379521 CYP27B1O15528 508 aa8.47□□□□□ -1.05
NFX1-202ENST00000379521 ANKRD45Q5TZF3 282 aa8.47□□□□□ -1.05
NFX1-202ENST00000379521 IL25Q9H293 177 aa8.47□□□□□ -1.05
NFX1-202ENST00000379521 MIS18AQ9NYP9 233 aa8.47□□□□□ -1.05
NFX1-202ENST00000379521 CHMP5Q9NZZ3 219 aa8.47□□□□□ -1.05
NFX1-202ENST00000379521 DBF4Q9UBU7 674 aaPredicted RBP8.47□□□□□ -1.05
NFX1-202ENST00000379521 MYH14Q7Z406 1995 aaKnown RBP8.47□□□□□ -1.05
NFX1-202ENST00000379521 FRAT2O75474 233 aaPredicted RBP8.47□□□□□ -1.05
NFX1-202ENST00000379521 PSME1Q06323 249 aa8.47□□□□□ -1.05
NFX1-202ENST00000379521 HSPA4P34932 840 aa8.47□□□□□ -1.05
NFX1-202ENST00000379521 USPL1Q5W0Q7 1092 aa8.47□□□□□ -1.05
NFX1-202ENST00000379521 INTS4Q96HW7 963 aaKnown RBP8.47□□□□□ -1.05
NFX1-202ENST00000379521 ESYT1Q9BSJ8 1104 aa8.47□□□□□ -1.05
NFX1-202ENST00000379521 HYPKQ9NX55 129 aa8.47□□□□□ -1.05
NFX1-202ENST00000379521 ATRNO75882 1429 aa8.47□□□□□ -1.05
NFX1-202ENST00000379521 FOCADQ5VW36 1801 aa8.46□□□□□ -1.05
NFX1-202ENST00000379521 MCM4P33991 863 aa8.46□□□□□ -1.05
NFX1-202ENST00000379521 FBXL16Q8N461 479 aa8.46□□□□□ -1.05
NFX1-202ENST00000379521 LAMB1P07942 1786 aa8.46□□□□□ -1.05
NFX1-202ENST00000379521 TCHHQ07283 1943 aa8.46□□□□□ -1.05
NFX1-202ENST00000379521 COL4A1P02462 1669 aa8.46□□□□□ -1.06
NFX1-202ENST00000379521 K7ELQ4 463 aaPredicted RBP8.46□□□□□ -1.06
NFX1-202ENST00000379521 CADPS2Q86UW7 1296 aa8.46□□□□□ -1.06
NFX1-202ENST00000379521 RTF1Q92541 710 aaKnown RBP8.46□□□□□ -1.06
NFX1-202ENST00000379521 LRRC59Q96AG4 307 aaKnown RBP8.46□□□□□ -1.06
NFX1-202ENST00000379521 LSG1Q9H089 658 aaKnown RBP8.46□□□□□ -1.06
NFX1-202ENST00000379521 RGPD3A6NKT7 1758 aaPredicted RBP8.46□□□□□ -1.06
NFX1-202ENST00000379521 RGPD4Q7Z3J3 1758 aa8.46□□□□□ -1.06
NFX1-202ENST00000379521 F6X3S4 739 aa8.46□□□□□ -1.06
NFX1-202ENST00000379521 ESCO1Q5FWF5 840 aa8.46□□□□□ -1.06
NFX1-202ENST00000379521 TMEM87AQ8NBN3 555 aa8.46□□□□□ -1.06
NFX1-202ENST00000379521 RGS22Q8NE09 1264 aa8.46□□□□□ -1.06
NFX1-202ENST00000379521 DCAF5Q96JK2 942 aa8.46□□□□□ -1.06
NFX1-202ENST00000379521 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.46□□□□□ -1.06
NFX1-202ENST00000379521 NRXN2Q9P2S2 1712 aa8.45□□□□□ -1.06
NFX1-202ENST00000379521 ERVV-2B6SEH9 535 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms