RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 RPGRQ92834 1020 aaKnown RBP25.26■■□□□ 1.63
SKI-201ENST00000378536 JAKMIP1Q96N16 626 aaKnown RBP25.25■■□□□ 1.63
SKI-201ENST00000378536 CWC22Q9HCG8 908 aaKnown RBP25.25■■□□□ 1.63
SKI-201ENST00000378536 CCDC69A6NI79 296 aa25.25■■□□□ 1.63
SKI-201ENST00000378536 RNMTO43148 476 aaKnown RBP25.24■■□□□ 1.63
SKI-201ENST00000378536 PDRG1Q9NUG6 133 aa25.24■■□□□ 1.63
SKI-201ENST00000378536 STK3Q13188 491 aa25.24■■□□□ 1.63
SKI-201ENST00000378536 SLAIN2Q9P270 581 aa25.24■■□□□ 1.63
SKI-201ENST00000378536 SBNO2Q9Y2G9 1366 aa25.24■■□□□ 1.63
SKI-201ENST00000378536 RFC4P35249 363 aa25.23■■□□□ 1.63
SKI-201ENST00000378536 ARHGEF10O15013 1369 aa25.23■■□□□ 1.63
SKI-201ENST00000378536 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.23■■□□□ 1.63
SKI-201ENST00000378536 KSR2Q6VAB6 950 aa25.23■■□□□ 1.63
SKI-201ENST00000378536 METP08581 1390 aa25.23■■□□□ 1.63
SKI-201ENST00000378536 IMMTQ16891 758 aaKnown RBP25.22■■□□□ 1.63
SKI-201ENST00000378536 SASS6Q6UVJ0 657 aa25.22■■□□□ 1.63
SKI-201ENST00000378536 ALDH1L1O75891 902 aa25.21■■□□□ 1.63
SKI-201ENST00000378536 CDC5LQ99459 802 aaKnown RBP25.21■■□□□ 1.63
SKI-201ENST00000378536 ABCC3O15438 1527 aa25.21■■□□□ 1.63
SKI-201ENST00000378536 NLRP1Q9C000 1473 aa25.21■■□□□ 1.63
SKI-201ENST00000378536 PRDM15P57071 1507 aaPredicted RBP25.21■■□□□ 1.63
SKI-201ENST00000378536 VAMP4O75379 141 aa25.21■■□□□ 1.63
SKI-201ENST00000378536 LDHAL6AQ6ZMR3 332 aa25.21■■□□□ 1.63
SKI-201ENST00000378536 ATP2B2Q01814 1243 aa25.21■■□□□ 1.63
SKI-201ENST00000378536 TRIM22Q8IYM9 498 aa25.21■■□□□ 1.63
SKI-201ENST00000378536 MEIS3Q99687 375 aa25.21■■□□□ 1.63
SKI-201ENST00000378536 CLASP1Q7Z460 1538 aa25.2■■□□□ 1.63
SKI-201ENST00000378536 KIF1BO60333 1816 aa25.2■■□□□ 1.62
SKI-201ENST00000378536 NFKBIBQ15653 356 aa25.2■■□□□ 1.62
SKI-201ENST00000378536 TSPYL6Q8N831 410 aa25.2■■□□□ 1.62
SKI-201ENST00000378536 ZSCAN31Q96LW9 406 aaPredicted RBP25.19■■□□□ 1.62
SKI-201ENST00000378536 TSR1Q2NL82 804 aaKnown RBP25.19■■□□□ 1.62
SKI-201ENST00000378536 CCDC43Q96MW1 224 aaKnown RBP25.19■■□□□ 1.62
SKI-201ENST00000378536 UBAC1Q9BSL1 405 aa25.19■■□□□ 1.62
SKI-201ENST00000378536 ECHDC1Q9NTX5 307 aa25.19■■□□□ 1.62
SKI-201ENST00000378536 TET3O43151 1660 aa25.19■■□□□ 1.62
SKI-201ENST00000378536 MAP3K12Q12852 859 aa25.18■■□□□ 1.62
SKI-201ENST00000378536 JARID2Q92833 1246 aaPredicted RBP25.18■■□□□ 1.62
SKI-201ENST00000378536 TPM1P09493 284 aa25.18■■□□□ 1.62
SKI-201ENST00000378536 HDAC1Q13547 482 aaPredicted RBP25.18■■□□□ 1.62
SKI-201ENST00000378536 NPHP4O75161 1426 aaPredicted RBP25.18■■□□□ 1.62
SKI-201ENST00000378536 ANKRD20A12PQ8NF67 263 aa25.18■■□□□ 1.62
SKI-201ENST00000378536 IGHDP01880 384 aa25.17■■□□□ 1.62
SKI-201ENST00000378536 SKAP1Q86WV1 359 aa25.17■■□□□ 1.62
SKI-201ENST00000378536 ZNF396Q96N95 335 aaPredicted RBP25.17■■□□□ 1.62
SKI-201ENST00000378536 BCL11BQ9C0K0 894 aaPredicted RBP25.17■■□□□ 1.62
SKI-201ENST00000378536 SOS1Q07889 1333 aaPredicted RBP25.17■■□□□ 1.62
SKI-201ENST00000378536 NUP133Q8WUM0 1156 aa25.17■■□□□ 1.62
SKI-201ENST00000378536 DDX17Q92841 729 aaKnown RBP25.17■■□□□ 1.62
SKI-201ENST00000378536 ZSCAN29Q8IWY8 852 aaPredicted RBP25.16■■□□□ 1.62
SKI-201ENST00000378536 CDCA7Q9BWT1 371 aaPredicted RBP25.16■■□□□ 1.62
SKI-201ENST00000378536 U3KPZ7 1027 aaPredicted RBP25.16■■□□□ 1.62
SKI-201ENST00000378536 DDX46Q7L014 1031 aaKnown RBP25.16■■□□□ 1.62
SKI-201ENST00000378536 GRM8O00222 908 aa25.16■■□□□ 1.62
SKI-201ENST00000378536 TPM3P06753 285 aa25.16■■□□□ 1.62
SKI-201ENST00000378536 CASTP20810 708 aaKnown RBP25.16■■□□□ 1.62
SKI-201ENST00000378536 ATP2B1P20020 1258 aa25.15■■□□□ 1.62
SKI-201ENST00000378536 KRT24Q2M2I5 525 aa25.15■■□□□ 1.62
SKI-201ENST00000378536 EVI5LQ96CN4 794 aa25.15■■□□□ 1.62
SKI-201ENST00000378536 NBPF6Q5VWK0 638 aa25.15■■□□□ 1.62
SKI-201ENST00000378536 NBPF5PQ86XG9 351 aaPredicted RBP25.15■■□□□ 1.62
SKI-201ENST00000378536 NBPF4Q96M43 638 aa25.15■■□□□ 1.62
SKI-201ENST00000378536 PIP4K2AP48426 406 aaPredicted RBP25.15■■□□□ 1.62
SKI-201ENST00000378536 CDKL5O76039 1030 aa25.14■■□□□ 1.62
SKI-201ENST00000378536 PRPF40BQ6NWY9 871 aaKnown RBP25.14■■□□□ 1.62
SKI-201ENST00000378536 CCDC152Q4G0S7 254 aa25.14■■□□□ 1.61
SKI-201ENST00000378536 WDR33Q9C0J8 1336 aaKnown RBP25.13■■□□□ 1.61
SKI-201ENST00000378536 DZIP1Q86YF9 867 aaKnown RBP25.13■■□□□ 1.61
SKI-201ENST00000378536 BABAM1Q9NWV8 329 aa25.13■■□□□ 1.61
SKI-201ENST00000378536 IQGAP3Q86VI3 1631 aa25.13■■□□□ 1.61
SKI-201ENST00000378536 SDF4Q9BRK5 362 aa25.13■■□□□ 1.61
SKI-201ENST00000378536 RHPN1Q8TCX5 695 aa25.12■■□□□ 1.61
SKI-201ENST00000378536 ANKRD44Q8N8A2 993 aa25.12■■□□□ 1.61
SKI-201ENST00000378536 LINS1Q8NG48 757 aa25.12■■□□□ 1.61
SKI-201ENST00000378536 TMOD2Q9NZR1 351 aa25.12■■□□□ 1.61
SKI-201ENST00000378536 MBD3O95983 291 aa25.12■■□□□ 1.61
SKI-201ENST00000378536 BMP2KLQ5H9B9 411 aa25.11■■□□□ 1.61
SKI-201ENST00000378536 LARP1BQ659C4 914 aaKnown RBP25.11■■□□□ 1.61
SKI-201ENST00000378536 USP5P45974 858 aa25.11■■□□□ 1.61
SKI-201ENST00000378536 ST5P78524 1137 aa25.11■■□□□ 1.61
SKI-201ENST00000378536 SETDB2Q96T68 719 aa25.11■■□□□ 1.61
SKI-201ENST00000378536 STK38Q15208 465 aa25.11■■□□□ 1.61
SKI-201ENST00000378536 NUCB1Q02818 461 aa25.1■■□□□ 1.61
SKI-201ENST00000378536 TTF1Q15361 905 aaPredicted RBP25.1■■□□□ 1.61
SKI-201ENST00000378536 DZIP3Q86Y13 1208 aaKnown RBP25.1■■□□□ 1.61
SKI-201ENST00000378536 NAPBQ9H115 298 aa25.1■■□□□ 1.61
SKI-201ENST00000378536 FIBPO43427 364 aa25.1■■□□□ 1.61
SKI-201ENST00000378536 ATP8B2P98198 1209 aa25.1■■□□□ 1.61
SKI-201ENST00000378536 TMEM94Q12767 1356 aa25.1■■□□□ 1.61
SKI-201ENST00000378536 PRPF40AO75400 957 aaKnown RBP25.1■■□□□ 1.61
SKI-201ENST00000378536 PCDHB15Q9Y5E8 787 aa25.1■■□□□ 1.61
SKI-201ENST00000378536 ARHGAP31Q2M1Z3 1444 aa25.1■■□□□ 1.61
SKI-201ENST00000378536 ZNF287Q9HBT7 754 aa25.09■■□□□ 1.61
SKI-201ENST00000378536 KDM5CP41229 1560 aa25.09■■□□□ 1.61
SKI-201ENST00000378536 PCMTD1Q96MG8 357 aaPredicted RBP25.09■■□□□ 1.61
SKI-201ENST00000378536 GOLIM4O00461 696 aa25.08■■□□□ 1.61
SKI-201ENST00000378536 TTC22Q5TAA0 569 aa25.08■■□□□ 1.61
SKI-201ENST00000378536 NIP7Q9Y221 180 aaKnown RBP eCLIP25.08■■□□□ 1.61
SKI-201ENST00000378536 PLA2R1Q13018 1463 aa25.08■■□□□ 1.6
SKI-201ENST00000378536 C6orf229H3BNL8 230 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms