RNA–Protein interactions for RNA: ENST00000377612.8

COMMD6-202, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-202ENST00000377612 COL11A2P13942 1736 aaPredicted RBP23.93■■□□□ 1.42
COMMD6-202ENST00000377612 HEG1Q9ULI3 1381 aa23.92■■□□□ 1.42
COMMD6-202ENST00000377612 CACNA1SQ13698 1873 aa23.92■■□□□ 1.42
COMMD6-202ENST00000377612 ZNF496Q96IT1 587 aaPredicted RBP23.92■■□□□ 1.42
COMMD6-202ENST00000377612 TEFQ10587 303 aa23.91■■□□□ 1.42
COMMD6-202ENST00000377612 VSIG10Q8N0Z9 540 aa23.91■■□□□ 1.42
COMMD6-202ENST00000377612 NUDCQ9Y266 331 aa23.91■■□□□ 1.42
COMMD6-202ENST00000377612 SBF1O95248 1867 aa23.91■■□□□ 1.42
COMMD6-202ENST00000377612 KCNQ3O43525 872 aa23.9■■□□□ 1.42
COMMD6-202ENST00000377612 GRIN3BO60391 1043 aa23.9■■□□□ 1.42
COMMD6-202ENST00000377612 ZNF790Q6PG37 636 aa23.9■■□□□ 1.42
COMMD6-202ENST00000377612 ADCY9O60503 1353 aa23.9■■□□□ 1.42
COMMD6-202ENST00000377612 USPL1Q5W0Q7 1092 aa23.88■■□□□ 1.41
COMMD6-202ENST00000377612 TTC5Q8N0Z6 440 aa23.88■■□□□ 1.41
COMMD6-202ENST00000377612 FCHSD2O94868 740 aa23.87■■□□□ 1.41
COMMD6-202ENST00000377612 MCM10Q7L590 875 aa23.87■■□□□ 1.41
COMMD6-202ENST00000377612 BCL2L12Q9HB09 334 aa23.87■■□□□ 1.41
COMMD6-202ENST00000377612 CCDC88AQ3V6T2 1871 aa23.87■■□□□ 1.41
COMMD6-202ENST00000377612 PARP3Q9Y6F1 533 aa23.86■■□□□ 1.41
COMMD6-202ENST00000377612 POLRMTO00411 1230 aaKnown RBP23.85■■□□□ 1.41
COMMD6-202ENST00000377612 DCTN1Q14203 1278 aa23.85■■□□□ 1.41
COMMD6-202ENST00000377612 ATP10DQ9P241 1426 aa23.84■■□□□ 1.41
COMMD6-202ENST00000377612 A0A0G2JLW4 131 aa23.84■■□□□ 1.41
COMMD6-202ENST00000377612 CANXP27824 592 aaKnown RBP23.84■■□□□ 1.41
COMMD6-202ENST00000377612 TM4SF1P30408 202 aa23.84■■□□□ 1.41
COMMD6-202ENST00000377612 NARFQ9UHQ1 456 aa23.84■■□□□ 1.41
COMMD6-202ENST00000377612 DPEP1P16444 411 aa23.83■■□□□ 1.41
COMMD6-202ENST00000377612 ARFGEF2Q9Y6D5 1785 aa23.83■■□□□ 1.4
COMMD6-202ENST00000377612 CARMIL3Q8ND23 1372 aa23.82■■□□□ 1.4
COMMD6-202ENST00000377612 EIF5P55010 431 aaKnown RBP23.82■■□□□ 1.4
COMMD6-202ENST00000377612 TGFB2P61812 414 aa23.82■■□□□ 1.4
COMMD6-202ENST00000377612 PLEKHF1Q96S99 279 aa23.82■■□□□ 1.4
COMMD6-202ENST00000377612 PRAMEF22A3QJZ6 481 aa23.81■■□□□ 1.4
COMMD6-202ENST00000377612 BTBD11A6QL63 1104 aa23.81■■□□□ 1.4
COMMD6-202ENST00000377612 ZPR1O75312 459 aa23.81■■□□□ 1.4
COMMD6-202ENST00000377612 KCNA3P22001 575 aa23.81■■□□□ 1.4
COMMD6-202ENST00000377612 NFIXQ14938 502 aa23.81■■□□□ 1.4
COMMD6-202ENST00000377612 FMNL2Q96PY5 1086 aa23.81■■□□□ 1.4
COMMD6-202ENST00000377612 NUP98P52948 1817 aa23.81■■□□□ 1.4
COMMD6-202ENST00000377612 STARD3NLO95772 234 aa23.79■■□□□ 1.4
COMMD6-202ENST00000377612 DDX10Q13206 875 aaKnown RBP23.78■■□□□ 1.4
COMMD6-202ENST00000377612 TIAM2Q8IVF5 1701 aa23.77■■□□□ 1.4
COMMD6-202ENST00000377612 A1BGP04217 495 aa23.77■■□□□ 1.4
COMMD6-202ENST00000377612 RTF1Q92541 710 aaKnown RBP23.77■■□□□ 1.4
COMMD6-202ENST00000377612 BCS1LQ9Y276 419 aa23.77■■□□□ 1.4
COMMD6-202ENST00000377612 PIP4K2AP48426 406 aaPredicted RBP23.76■■□□□ 1.39
COMMD6-202ENST00000377612 USP16Q9Y5T5 823 aa23.76■■□□□ 1.39
COMMD6-202ENST00000377612 HTATSF1O43719 755 aaKnown RBP23.75■■□□□ 1.39
COMMD6-202ENST00000377612 CHRNA5P30532 468 aa23.75■■□□□ 1.39
COMMD6-202ENST00000377612 IL6STP40189 918 aaPredicted RBP23.74■■□□□ 1.39
COMMD6-202ENST00000377612 THUMPD2Q9BTF0 503 aaKnown RBP23.74■■□□□ 1.39
COMMD6-202ENST00000377612 TEX13AQ9BXU3 409 aaPredicted RBP23.74■■□□□ 1.39
COMMD6-202ENST00000377612 ZNF330Q9Y3S2 320 aaPredicted RBP23.74■■□□□ 1.39
COMMD6-202ENST00000377612 FER1L6Q2WGJ9 1857 aa23.74■■□□□ 1.39
COMMD6-202ENST00000377612 DICER1Q9UPY3 1922 aaKnown RBP23.73■■□□□ 1.39
COMMD6-202ENST00000377612 RALBP1Q15311 655 aa23.73■■□□□ 1.39
COMMD6-202ENST00000377612 TBC1D2BQ9UPU7 963 aa23.73■■□□□ 1.39
COMMD6-202ENST00000377612 NFE2L2Q16236 605 aa23.72■■□□□ 1.39
COMMD6-202ENST00000377612 TBC1D9BQ66K14 1250 aa23.72■■□□□ 1.39
COMMD6-202ENST00000377612 MIS18AQ9NYP9 233 aa23.72■■□□□ 1.39
COMMD6-202ENST00000377612 TNRC6CQ9HCJ0 1690 aaKnown RBP23.72■■□□□ 1.39
COMMD6-202ENST00000377612 MYBBP1AQ9BQG0 1328 aaKnown RBP23.71■■□□□ 1.39
COMMD6-202ENST00000377612 A0A087WZG4 1122 aa23.71■■□□□ 1.39
COMMD6-202ENST00000377612 CAMTA2O94983 1202 aa23.71■■□□□ 1.39
COMMD6-202ENST00000377612 SERPINB2P05120 415 aa23.71■■□□□ 1.39
COMMD6-202ENST00000377612 SLX4Q8IY92 1834 aa23.7■■□□□ 1.39
COMMD6-202ENST00000377612 BICDL1Q6ZP65 573 aa23.7■■□□□ 1.38
COMMD6-202ENST00000377612 ANKRD36CQ5JPF3 1778 aa23.7■■□□□ 1.38
COMMD6-202ENST00000377612 NBPF26B4DH59 902 aa23.69■■□□□ 1.38
COMMD6-202ENST00000377612 NBPF10Q6P3W6 841 aaKnown RBP23.69■■□□□ 1.38
COMMD6-202ENST00000377612 NBPF15Q8N660 670 aa23.69■■□□□ 1.38
COMMD6-202ENST00000377612 GIGYF1O75420 1035 aaPredicted RBP23.68■■□□□ 1.38
COMMD6-202ENST00000377612 SNRPA1P09661 255 aaKnown RBP23.68■■□□□ 1.38
COMMD6-202ENST00000377612 C1QTNF8P60827 252 aa23.68■■□□□ 1.38
COMMD6-202ENST00000377612 TAF7Q15545 349 aaPredicted RBP23.68■■□□□ 1.38
COMMD6-202ENST00000377612 PIM2Q9P1W9 311 aa23.68■■□□□ 1.38
COMMD6-202ENST00000377612 MAPK8IP3Q9UPT6 1336 aa23.67■■□□□ 1.38
COMMD6-202ENST00000377612 ZNF526Q8TF50 670 aaPredicted RBP23.67■■□□□ 1.38
COMMD6-202ENST00000377612 NEFMP07197 916 aa23.65■■□□□ 1.38
COMMD6-202ENST00000377612 ARHGAP27Q6ZUM4 889 aa23.65■■□□□ 1.38
COMMD6-202ENST00000377612 DZIP3Q86Y13 1208 aaKnown RBP23.65■■□□□ 1.38
COMMD6-202ENST00000377612 DALRD3Q5D0E6 543 aaKnown RBP23.64■■□□□ 1.37
COMMD6-202ENST00000377612 PRR5LQ6MZQ0 368 aa23.64■■□□□ 1.37
COMMD6-202ENST00000377612 CCDC24Q8N4L8 307 aa23.64■■□□□ 1.37
COMMD6-202ENST00000377612 LAMB2P55268 1798 aa23.61■■□□□ 1.37
COMMD6-202ENST00000377612 EIF4A1P60842 406 aaKnown RBP23.61■■□□□ 1.37
COMMD6-202ENST00000377612 GPBP1L1Q9HC44 474 aaPredicted RBP23.61■■□□□ 1.37
COMMD6-202ENST00000377612 C2CD5Q86YS7 1000 aa23.6■■□□□ 1.37
COMMD6-202ENST00000377612 CCDC146Q8IYE0 955 aa23.6■■□□□ 1.37
COMMD6-202ENST00000377612 TMPOP42166 694 aaKnown RBP23.59■■□□□ 1.37
COMMD6-202ENST00000377612 PNISRQ8TF01 805 aaKnown RBP23.59■■□□□ 1.37
COMMD6-202ENST00000377612 PRELPP51888 382 aa23.58■■□□□ 1.37
COMMD6-202ENST00000377612 RASSF7Q02833 373 aa23.58■■□□□ 1.37
COMMD6-202ENST00000377612 PNNQ9H307 717 aaKnown RBP23.58■■□□□ 1.37
COMMD6-202ENST00000377612 PRKRIP1Q9H875 184 aaPredicted RBP23.58■■□□□ 1.37
COMMD6-202ENST00000377612 RRP7AQ9Y3A4 280 aaKnown RBP23.58■■□□□ 1.37
COMMD6-202ENST00000377612 RIPK4P57078 832 aa23.57■■□□□ 1.36
COMMD6-202ENST00000377612 C9orf131Q5VYM1 1079 aa23.57■■□□□ 1.36
COMMD6-202ENST00000377612 KIF3CO14782 793 aa23.56■■□□□ 1.36
COMMD6-202ENST00000377612 CNBD1Q8NA66 436 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms