RNA–Protein interactions for RNA: ENST00000377080.7

USP11-203, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-203ENST00000377080 DISP2A7MBM2 1401 aa12.34□□□□□ -0.43
USP11-203ENST00000377080 SPATA31A3Q5VYP0 1347 aa12.34□□□□□ -0.43
USP11-203ENST00000377080 CAMTA1Q9Y6Y1 1673 aa12.33□□□□□ -0.44
USP11-203ENST00000377080 MTHFSDQ2M296 383 aaKnown RBP12.33□□□□□ -0.44
USP11-203ENST00000377080 MCM10Q7L590 875 aa12.33□□□□□ -0.44
USP11-203ENST00000377080 KRT28Q7Z3Y7 464 aa12.33□□□□□ -0.44
USP11-203ENST00000377080 STK31Q9BXU1 1019 aa12.33□□□□□ -0.44
USP11-203ENST00000377080 RTN4Q9NQC3 1192 aaKnown RBP12.33□□□□□ -0.44
USP11-203ENST00000377080 PPP1R1BQ9UD71 204 aaPredicted RBP12.33□□□□□ -0.44
USP11-203ENST00000377080 SALL3Q9BXA9 1300 aa12.33□□□□□ -0.44
USP11-203ENST00000377080 NRAPQ86VF7 1730 aa12.32□□□□□ -0.44
USP11-203ENST00000377080 TNS3Q68CZ2 1445 aa12.32□□□□□ -0.44
USP11-203ENST00000377080 CD2BP2O95400 341 aaKnown RBP12.32□□□□□ -0.44
USP11-203ENST00000377080 BAG4O95429 457 aaKnown RBP12.32□□□□□ -0.44
USP11-203ENST00000377080 HOXB7P09629 217 aa12.32□□□□□ -0.44
USP11-203ENST00000377080 PDE1AP54750 535 aa12.32□□□□□ -0.44
USP11-203ENST00000377080 ZNF445P59923 1031 aa12.32□□□□□ -0.44
USP11-203ENST00000377080 FAM98CQ17RN3 349 aaKnown RBP12.32□□□□□ -0.44
USP11-203ENST00000377080 FAM182BQ5T319 152 aa12.32□□□□□ -0.44
USP11-203ENST00000377080 MEIS3Q99687 375 aa12.32□□□□□ -0.44
USP11-203ENST00000377080 TSPYL4Q9UJ04 414 aa12.32□□□□□ -0.44
USP11-203ENST00000377080 PIK3C2AO00443 1686 aa12.32□□□□□ -0.44
USP11-203ENST00000377080 FAM208AQ9UK61 1670 aaKnown RBP12.32□□□□□ -0.44
USP11-203ENST00000377080 GNAT3A8MTJ3 354 aa12.31□□□□□ -0.44
USP11-203ENST00000377080 PLEKHG5O94827 1062 aa12.31□□□□□ -0.44
USP11-203ENST00000377080 C16orf71Q8IYS4 520 aaPredicted RBP12.31□□□□□ -0.44
USP11-203ENST00000377080 INTS4Q96HW7 963 aaKnown RBP12.31□□□□□ -0.44
USP11-203ENST00000377080 PPP1R9BQ96SB3 815 aa12.31□□□□□ -0.44
USP11-203ENST00000377080 PHF8Q9UPP1 1060 aa12.31□□□□□ -0.44
USP11-203ENST00000377080 RREB1Q92766 1687 aa12.3□□□□□ -0.44
USP11-203ENST00000377080 RAB11FIP3O75154 756 aa12.3□□□□□ -0.44
USP11-203ENST00000377080 MCCP23508 829 aa12.3□□□□□ -0.44
USP11-203ENST00000377080 TAF7Q15545 349 aaPredicted RBP12.3□□□□□ -0.44
USP11-203ENST00000377080 CABLES1Q8TDN4 633 aa12.3□□□□□ -0.44
USP11-203ENST00000377080 EYA1Q99502 592 aa12.3□□□□□ -0.44
USP11-203ENST00000377080 PHRF1Q9P1Y6 1649 aaKnown RBP12.29□□□□□ -0.44
USP11-203ENST00000377080 NUP188Q5SRE5 1749 aa12.29□□□□□ -0.44
USP11-203ENST00000377080 TRPM3Q9HCF6 1732 aaPredicted RBP12.29□□□□□ -0.44
USP11-203ENST00000377080 AMPHP49418 695 aa12.29□□□□□ -0.44
USP11-203ENST00000377080 CCDC173Q0VFZ6 552 aa12.29□□□□□ -0.44
USP11-203ENST00000377080 HS1BP3Q53T59 392 aa12.29□□□□□ -0.44
USP11-203ENST00000377080 ZNF784Q8NCA9 323 aaPredicted RBP12.29□□□□□ -0.44
USP11-203ENST00000377080 RBM42Q9BTD8 480 aaKnown RBP12.29□□□□□ -0.44
USP11-203ENST00000377080 LRRCC1Q9C099 1032 aa12.29□□□□□ -0.44
USP11-203ENST00000377080 SSFA2P28290 1259 aa12.28□□□□□ -0.44
USP11-203ENST00000377080 PSME1Q06323 249 aa12.28□□□□□ -0.44
USP11-203ENST00000377080 CUL4AQ13619 759 aa12.28□□□□□ -0.44
USP11-203ENST00000377080 LMOD2Q6P5Q4 547 aa12.28□□□□□ -0.44
USP11-203ENST00000377080 NGDNQ8NEJ9 315 aaKnown RBP12.28□□□□□ -0.44
USP11-203ENST00000377080 CAMKK2Q96RR4 588 aa12.28□□□□□ -0.44
USP11-203ENST00000377080 GZF1Q9H116 711 aaPredicted RBP12.28□□□□□ -0.44
USP11-203ENST00000377080 RRAGDQ9NQL2 400 aaPredicted RBP12.28□□□□□ -0.44
USP11-203ENST00000377080 HDAC5Q9UQL6 1122 aa12.28□□□□□ -0.44
USP11-203ENST00000377080 MAP3K5Q99683 1374 aa12.28□□□□□ -0.44
USP11-203ENST00000377080 ALS2Q96Q42 1657 aa12.27□□□□□ -0.45
USP11-203ENST00000377080 FLIIQ13045 1269 aa12.27□□□□□ -0.45
USP11-203ENST00000377080 KRT24Q2M2I5 525 aa12.27□□□□□ -0.45
USP11-203ENST00000377080 SSH3Q8TE77 659 aa12.27□□□□□ -0.45
USP11-203ENST00000377080 ESYT1Q9BSJ8 1104 aa12.27□□□□□ -0.45
USP11-203ENST00000377080 SPON1Q9HCB6 807 aa12.27□□□□□ -0.45
USP11-203ENST00000377080 THSD7AQ9UPZ6 1657 aa12.26□□□□□ -0.45
USP11-203ENST00000377080 TRIM37O94972 964 aa12.26□□□□□ -0.45
USP11-203ENST00000377080 MX1P20591 662 aa12.26□□□□□ -0.45
USP11-203ENST00000377080 HOXC9P31274 260 aa12.26□□□□□ -0.45
USP11-203ENST00000377080 G2E3Q7L622 706 aa12.26□□□□□ -0.45
USP11-203ENST00000377080 OTUD7AQ8TE49 926 aaPredicted RBP12.26□□□□□ -0.45
USP11-203ENST00000377080 ANP32BQ92688 251 aaKnown RBP12.26□□□□□ -0.45
USP11-203ENST00000377080 LMBRD1Q9NUN5 540 aa12.26□□□□□ -0.45
USP11-203ENST00000377080 DDX49Q9Y6V7 483 aaKnown RBP12.26□□□□□ -0.45
USP11-203ENST00000377080 CEMIPQ8WUJ3 1361 aa12.26□□□□□ -0.45
USP11-203ENST00000377080 OVOS2A0A0G2JMS6 1433 aa12.26□□□□□ -0.45
USP11-203ENST00000377080 ESPNB1AK53 854 aa12.25□□□□□ -0.45
USP11-203ENST00000377080 MBD3O95983 291 aa12.25□□□□□ -0.45
USP11-203ENST00000377080 APBA3O96018 575 aa12.25□□□□□ -0.45
USP11-203ENST00000377080 C1QTNF8P60827 252 aa12.25□□□□□ -0.45
USP11-203ENST00000377080 HSP90AB4PQ58FF6 505 aa12.25□□□□□ -0.45
USP11-203ENST00000377080 NBPF14Q5TI25 921 aa12.25□□□□□ -0.45
USP11-203ENST00000377080 GAS2L3Q86XJ1 694 aa12.25□□□□□ -0.45
USP11-203ENST00000377080 BTG4Q9NY30 223 aa12.25□□□□□ -0.45
USP11-203ENST00000377080 UTRNP46939 3433 aa12.24□□□□□ -0.45
USP11-203ENST00000377080 PDIA4P13667 645 aaKnown RBP12.24□□□□□ -0.45
USP11-203ENST00000377080 CHMLP26374 656 aa12.24□□□□□ -0.45
USP11-203ENST00000377080 COL14A1Q05707 1796 aaKnown RBP12.24□□□□□ -0.45
USP11-203ENST00000377080 POLA2Q14181 598 aa12.24□□□□□ -0.45
USP11-203ENST00000377080 KDM3BQ7LBC6 1761 aa12.24□□□□□ -0.45
USP11-203ENST00000377080 IL17REQ8NFR9 667 aa12.24□□□□□ -0.45
USP11-203ENST00000377080 TRIM44Q96DX7 344 aaPredicted RBP12.24□□□□□ -0.45
USP11-203ENST00000377080 PANK2Q9BZ23 570 aa12.24□□□□□ -0.45
USP11-203ENST00000377080 USP44Q9H0E7 712 aa12.24□□□□□ -0.45
USP11-203ENST00000377080 ANO8Q9HCE9 1232 aaPredicted RBP12.24□□□□□ -0.45
USP11-203ENST00000377080 CRYBG1Q9Y4K1 1723 aa12.24□□□□□ -0.45
USP11-203ENST00000377080 CHD4Q14839 1912 aa12.23□□□□□ -0.45
USP11-203ENST00000377080 USP42Q9H9J4 1324 aaKnown RBP12.23□□□□□ -0.45
USP11-203ENST00000377080 KCNQ2O43526 872 aa12.23□□□□□ -0.45
USP11-203ENST00000377080 SMARCA5O60264 1052 aaPredicted RBP12.23□□□□□ -0.45
USP11-203ENST00000377080 NLRP6P59044 892 aa12.23□□□□□ -0.45
USP11-203ENST00000377080 FKBP5Q13451 457 aaPredicted RBP12.23□□□□□ -0.45
USP11-203ENST00000377080 IP6K1Q92551 441 aa12.23□□□□□ -0.45
USP11-203ENST00000377080 LMO7Q8WWI1 1683 aa12.22□□□□□ -0.45
USP11-203ENST00000377080 NCAPD2Q15021 1401 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms