RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 LDHAL6AQ6ZMR3 332 aa15.95■□□□□ 0.14
GPC6-201ENST00000377047 CUL5Q93034 780 aa15.95■□□□□ 0.14
GPC6-201ENST00000377047 KDM5BQ9UGL1 1544 aa15.95■□□□□ 0.14
GPC6-201ENST00000377047 CBFA2T2O43439 604 aa15.95■□□□□ 0.14
GPC6-201ENST00000377047 DHX8Q14562 1220 aaKnown RBP15.94■□□□□ 0.14
GPC6-201ENST00000377047 SLC12A7Q9Y666 1083 aa15.94■□□□□ 0.14
GPC6-201ENST00000377047 PTPRCP08575 1304 aa15.94■□□□□ 0.14
GPC6-201ENST00000377047 NKTRP30414 1462 aaKnown RBP15.94■□□□□ 0.14
GPC6-201ENST00000377047 FAM83GA6ND36 823 aa15.94■□□□□ 0.14
GPC6-201ENST00000377047 CCDC181Q5TID7 509 aa15.94■□□□□ 0.14
GPC6-201ENST00000377047 NBPF6Q5VWK0 638 aa15.94■□□□□ 0.14
GPC6-201ENST00000377047 NBPF5PQ86XG9 351 aaPredicted RBP15.94■□□□□ 0.14
GPC6-201ENST00000377047 JARID2Q92833 1246 aaPredicted RBP15.94■□□□□ 0.14
GPC6-201ENST00000377047 NBPF4Q96M43 638 aa15.94■□□□□ 0.14
GPC6-201ENST00000377047 CCDC196A0A1B0GTZ2 297 aa15.94■□□□□ 0.14
GPC6-201ENST00000377047 BACH2Q9BYV9 841 aa15.94■□□□□ 0.14
GPC6-201ENST00000377047 NUP62CLQ9H1M0 184 aa15.94■□□□□ 0.14
GPC6-201ENST00000377047 SNRPA1P09661 255 aaKnown RBP15.93■□□□□ 0.14
GPC6-201ENST00000377047 SLC4A8Q2Y0W8 1093 aa15.93■□□□□ 0.14
GPC6-201ENST00000377047 PPP4R3AQ6IN85 833 aa15.93■□□□□ 0.14
GPC6-201ENST00000377047 TEX14Q8IWB6 1497 aa15.93■□□□□ 0.14
GPC6-201ENST00000377047 TXLNBQ8N3L3 684 aa15.93■□□□□ 0.14
GPC6-201ENST00000377047 ZCRB1Q8TBF4 217 aaKnown RBP15.93■□□□□ 0.14
GPC6-201ENST00000377047 FEZ1Q99689 392 aa15.93■□□□□ 0.14
GPC6-201ENST00000377047 NSD2O96028 1365 aa15.93■□□□□ 0.14
GPC6-201ENST00000377047 ERLIN2O94905 339 aa15.93■□□□□ 0.14
GPC6-201ENST00000377047 UBE3BQ7Z3V4 1068 aa15.93■□□□□ 0.14
GPC6-201ENST00000377047 RNF41Q9H4P4 317 aaPredicted RBP15.93■□□□□ 0.14
GPC6-201ENST00000377047 FERMT3Q86UX7 667 aa15.92■□□□□ 0.14
GPC6-201ENST00000377047 DESP17661 470 aa15.92■□□□□ 0.14
GPC6-201ENST00000377047 ATP6V1AP38606 617 aa15.92■□□□□ 0.14
GPC6-201ENST00000377047 GOLIM4O00461 696 aa15.92■□□□□ 0.14
GPC6-201ENST00000377047 IFIT3O14879 490 aaKnown RBP15.92■□□□□ 0.14
GPC6-201ENST00000377047 UPF3BQ9BZI7 483 aaKnown RBP15.92■□□□□ 0.14
GPC6-201ENST00000377047 C11orf95C9JLR9 678 aaPredicted RBP15.92■□□□□ 0.14
GPC6-201ENST00000377047 NEFHP12036 1026 aa15.92■□□□□ 0.14
GPC6-201ENST00000377047 FBLN1P23142 703 aa15.91■□□□□ 0.14
GPC6-201ENST00000377047 MPNDQ8N594 471 aa15.91■□□□□ 0.14
GPC6-201ENST00000377047 SNRKQ9NRH2 765 aa15.91■□□□□ 0.14
GPC6-201ENST00000377047 NPHP3Q7Z494 1330 aa15.91■□□□□ 0.14
GPC6-201ENST00000377047 NEBLO76041 1014 aa15.91■□□□□ 0.14
GPC6-201ENST00000377047 FAM177A1Q8N128 213 aaPredicted RBP15.91■□□□□ 0.14
GPC6-201ENST00000377047 ASXL2Q76L83 1435 aa15.91■□□□□ 0.14
GPC6-201ENST00000377047 TRIM21P19474 475 aaKnown RBP15.91■□□□□ 0.14
GPC6-201ENST00000377047 EIF5P55010 431 aaKnown RBP15.91■□□□□ 0.14
GPC6-201ENST00000377047 GUCY1B3Q02153 619 aa15.91■□□□□ 0.14
GPC6-201ENST00000377047 THOC2Q8NI27 1593 aaKnown RBP15.91■□□□□ 0.14
GPC6-201ENST00000377047 TTF1Q15361 905 aaPredicted RBP15.9■□□□□ 0.14
GPC6-201ENST00000377047 UBA5Q9GZZ9 404 aa15.9■□□□□ 0.14
GPC6-201ENST00000377047 PI4KAP2A4QPH2 592 aa15.9■□□□□ 0.14
GPC6-201ENST00000377047 SSRP1Q08945 709 aaKnown RBP15.9■□□□□ 0.14
GPC6-201ENST00000377047 PI4KAP1Q8N8J0 262 aa15.9■□□□□ 0.14
GPC6-201ENST00000377047 GOLGA8AA7E2F4 631 aa15.9■□□□□ 0.14
GPC6-201ENST00000377047 GOLGA8BA8MQT2 603 aa15.9■□□□□ 0.14
GPC6-201ENST00000377047 ANXA1P04083 346 aa15.9■□□□□ 0.14
GPC6-201ENST00000377047 SSR1P43307 286 aaKnown RBP15.9■□□□□ 0.14
GPC6-201ENST00000377047 CATIPQ7Z7H3 387 aa15.9■□□□□ 0.14
GPC6-201ENST00000377047 MBIPQ9NS73 344 aa15.9■□□□□ 0.14
GPC6-201ENST00000377047 PIK3R4Q99570 1358 aa15.9■□□□□ 0.14
GPC6-201ENST00000377047 PPP1R12BO60237 982 aaPredicted RBP15.9■□□□□ 0.14
GPC6-201ENST00000377047 LDHCP07864 332 aa15.9■□□□□ 0.14
GPC6-201ENST00000377047 HMGB1P09429 215 aaKnown RBP15.9■□□□□ 0.14
GPC6-201ENST00000377047 C8orf76Q96K31 380 aa15.9■□□□□ 0.14
GPC6-201ENST00000377047 EHMT1Q9H9B1 1298 aa15.9■□□□□ 0.14
GPC6-201ENST00000377047 BAG3O95817 575 aa15.89■□□□□ 0.14
GPC6-201ENST00000377047 CCDC152Q4G0S7 254 aa15.89■□□□□ 0.14
GPC6-201ENST00000377047 UHRF1BP1LA0JNW5 1464 aa15.89■□□□□ 0.13
GPC6-201ENST00000377047 NLRP5P59047 1200 aa15.89■□□□□ 0.13
GPC6-201ENST00000377047 DISP3Q9P2K9 1392 aa15.89■□□□□ 0.13
GPC6-201ENST00000377047 CAMK4Q16566 473 aa15.89■□□□□ 0.13
GPC6-201ENST00000377047 SETDB2Q96T68 719 aa15.88■□□□□ 0.13
GPC6-201ENST00000377047 CABP5Q9NP86 173 aa15.88■□□□□ 0.13
GPC6-201ENST00000377047 SMTNL1A8MU46 457 aa15.88■□□□□ 0.13
GPC6-201ENST00000377047 C20orf194Q5TEA3 1177 aa15.88■□□□□ 0.13
GPC6-201ENST00000377047 SPTY2D1Q68D10 685 aaPredicted RBP15.88■□□□□ 0.13
GPC6-201ENST00000377047 ANKRD36BQ8N2N9 1353 aa15.88■□□□□ 0.13
GPC6-201ENST00000377047 MYO1BO43795 1136 aa15.88■□□□□ 0.13
GPC6-201ENST00000377047 PPIP5K1Q6PFW1 1433 aa15.88■□□□□ 0.13
GPC6-201ENST00000377047 HLA-DOAP06340 250 aa15.88■□□□□ 0.13
GPC6-201ENST00000377047 EVI5LQ96CN4 794 aa15.88■□□□□ 0.13
GPC6-201ENST00000377047 TMEM266Q2M3C6 531 aa15.88■□□□□ 0.13
GPC6-201ENST00000377047 VAT1LQ9HCJ6 419 aa15.88■□□□□ 0.13
GPC6-201ENST00000377047 TTC21AQ8NDW8 1320 aa15.88■□□□□ 0.13
GPC6-201ENST00000377047 ANKRD13DQ6ZTN6 518 aa15.88■□□□□ 0.13
GPC6-201ENST00000377047 CCDC194A0A1B0GVG4 234 aa15.87■□□□□ 0.13
GPC6-201ENST00000377047 TRIM27P14373 513 aa15.87■□□□□ 0.13
GPC6-201ENST00000377047 CABLES1Q8TDN4 633 aa15.87■□□□□ 0.13
GPC6-201ENST00000377047 PDIA4P13667 645 aaKnown RBP15.87■□□□□ 0.13
GPC6-201ENST00000377047 CCT2P78371 535 aaKnown RBP15.87■□□□□ 0.13
GPC6-201ENST00000377047 DDB1Q16531 1140 aa15.87■□□□□ 0.13
GPC6-201ENST00000377047 CCDC144CPQ8IYA2 1237 aa15.87■□□□□ 0.13
GPC6-201ENST00000377047 RAPGEF6Q8TEU7 1601 aa15.87■□□□□ 0.13
GPC6-201ENST00000377047 TSPY2A6NKD2 308 aa15.87■□□□□ 0.13
GPC6-201ENST00000377047 SEPT7Q16181 437 aaKnown RBP15.87■□□□□ 0.13
GPC6-201ENST00000377047 AXDND1Q5T1B0 1012 aaPredicted RBP15.87■□□□□ 0.13
GPC6-201ENST00000377047 RAB34Q9BZG1 259 aa15.87■□□□□ 0.13
GPC6-201ENST00000377047 RIMS2Q9UQ26 1411 aa15.86■□□□□ 0.13
GPC6-201ENST00000377047 POTEJP0CG39 1038 aa15.86■□□□□ 0.13
GPC6-201ENST00000377047 LIG1P18858 919 aa15.86■□□□□ 0.13
GPC6-201ENST00000377047 TSG101Q99816 390 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms