RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 ZBTB1Q9Y2K1 713 aa23.58■■□□□ 1.36
HLA-A-201ENST00000376802 ZPR1O75312 459 aa23.57■■□□□ 1.36
HLA-A-201ENST00000376802 CNGB1Q14028 1251 aaPredicted RBP23.57■■□□□ 1.36
HLA-A-201ENST00000376802 NRXN2Q9P2S2 1712 aa23.56■■□□□ 1.36
HLA-A-201ENST00000376802 CHRNA5P30532 468 aa23.56■■□□□ 1.36
HLA-A-201ENST00000376802 COL15A1P39059 1388 aa23.56■■□□□ 1.36
HLA-A-201ENST00000376802 IL17REQ8NFR9 667 aa23.56■■□□□ 1.36
HLA-A-201ENST00000376802 BCL2L12Q9HB09 334 aa23.56■■□□□ 1.36
HLA-A-201ENST00000376802 NARFQ9UHQ1 456 aa23.56■■□□□ 1.36
HLA-A-201ENST00000376802 HSPA6P17066 643 aa23.55■■□□□ 1.36
HLA-A-201ENST00000376802 NFIXQ14938 502 aa23.55■■□□□ 1.36
HLA-A-201ENST00000376802 SBF1O95248 1867 aa23.54■■□□□ 1.36
HLA-A-201ENST00000376802 U2SURPO15042 1029 aaKnown RBP23.54■■□□□ 1.36
HLA-A-201ENST00000376802 DALRD3Q5D0E6 543 aaKnown RBP23.54■■□□□ 1.36
HLA-A-201ENST00000376802 GNAT3A8MTJ3 354 aa23.51■■□□□ 1.35
HLA-A-201ENST00000376802 CANXP27824 592 aaKnown RBP23.51■■□□□ 1.35
HLA-A-201ENST00000376802 C9orf131Q5VYM1 1079 aa23.51■■□□□ 1.35
HLA-A-201ENST00000376802 ZNF496Q96IT1 587 aaPredicted RBP23.51■■□□□ 1.35
HLA-A-201ENST00000376802 DLEC1Q9Y238 1755 aa23.5■■□□□ 1.35
HLA-A-201ENST00000376802 GAS2L2Q8NHY3 880 aa23.5■■□□□ 1.35
HLA-A-201ENST00000376802 EIF5P55010 431 aaKnown RBP23.49■■□□□ 1.35
HLA-A-201ENST00000376802 ZNF790Q6PG37 636 aa23.49■■□□□ 1.35
HLA-A-201ENST00000376802 TTC5Q8N0Z6 440 aa23.49■■□□□ 1.35
HLA-A-201ENST00000376802 PHACTR3Q96KR7 559 aa23.49■■□□□ 1.35
HLA-A-201ENST00000376802 NMRK2Q9NPI5 230 aa23.49■■□□□ 1.35
HLA-A-201ENST00000376802 TEFQ10587 303 aa23.48■■□□□ 1.35
HLA-A-201ENST00000376802 CEMIPQ8WUJ3 1361 aa23.48■■□□□ 1.35
HLA-A-201ENST00000376802 HEG1Q9ULI3 1381 aa23.48■■□□□ 1.35
HLA-A-201ENST00000376802 STARD3NLO95772 234 aa23.47■■□□□ 1.35
HLA-A-201ENST00000376802 SERPINB2P05120 415 aa23.47■■□□□ 1.35
HLA-A-201ENST00000376802 TOMM70O94826 608 aa23.46■■□□□ 1.35
HLA-A-201ENST00000376802 RSPH6AQ9H0K4 717 aa23.46■■□□□ 1.35
HLA-A-201ENST00000376802 ANKRD31Q8N7Z5 1873 aa23.45■■□□□ 1.34
HLA-A-201ENST00000376802 PRKAR2BP31323 418 aa23.44■■□□□ 1.34
HLA-A-201ENST00000376802 CARMIL3Q8ND23 1372 aa23.44■■□□□ 1.34
HLA-A-201ENST00000376802 SCN7AQ01118 1682 aa23.44■■□□□ 1.34
HLA-A-201ENST00000376802 RNF181Q9P0P0 153 aa23.43■■□□□ 1.34
HLA-A-201ENST00000376802 KCNQ3O43525 872 aa23.42■■□□□ 1.34
HLA-A-201ENST00000376802 TEX13AQ9BXU3 409 aaPredicted RBP23.42■■□□□ 1.34
HLA-A-201ENST00000376802 CCDC88AQ3V6T2 1871 aa23.41■■□□□ 1.34
HLA-A-201ENST00000376802 A0A087WZG4 1122 aa23.41■■□□□ 1.34
HLA-A-201ENST00000376802 TBC1D9BQ66K14 1250 aa23.41■■□□□ 1.34
HLA-A-201ENST00000376802 BICDL1Q6ZP65 573 aa23.41■■□□□ 1.34
HLA-A-201ENST00000376802 CFAP53Q96M91 514 aa23.41■■□□□ 1.34
HLA-A-201ENST00000376802 A1BGP04217 495 aa23.4■■□□□ 1.34
HLA-A-201ENST00000376802 FMNL2Q96PY5 1086 aa23.4■■□□□ 1.34
HLA-A-201ENST00000376802 TBC1D2BQ9UPU7 963 aa23.4■■□□□ 1.34
HLA-A-201ENST00000376802 PPP2R1AP30153 589 aa23.39■■□□□ 1.34
HLA-A-201ENST00000376802 IL6STP40189 918 aaPredicted RBP23.39■■□□□ 1.34
HLA-A-201ENST00000376802 PRELPP51888 382 aa23.39■■□□□ 1.34
HLA-A-201ENST00000376802 RASSF7Q02833 373 aa23.39■■□□□ 1.34
HLA-A-201ENST00000376802 C2CD5Q86YS7 1000 aa23.39■■□□□ 1.34
HLA-A-201ENST00000376802 BTBD11A6QL63 1104 aa23.38■■□□□ 1.33
HLA-A-201ENST00000376802 TTLL6Q8N841 843 aa23.38■■□□□ 1.33
HLA-A-201ENST00000376802 APLP1P51693 650 aa23.37■■□□□ 1.33
HLA-A-201ENST00000376802 KDM2BQ8NHM5 1336 aa23.37■■□□□ 1.33
HLA-A-201ENST00000376802 TNRC6CQ9HCJ0 1690 aaKnown RBP23.37■■□□□ 1.33
HLA-A-201ENST00000376802 H0YIN7 160 aa23.36■■□□□ 1.33
HLA-A-201ENST00000376802 NUDCQ9Y266 331 aa23.36■■□□□ 1.33
HLA-A-201ENST00000376802 ZNF330Q9Y3S2 320 aaPredicted RBP23.36■■□□□ 1.33
HLA-A-201ENST00000376802 USP16Q9Y5T5 823 aa23.36■■□□□ 1.33
HLA-A-201ENST00000376802 BCORQ6W2J9 1755 aa23.36■■□□□ 1.33
HLA-A-201ENST00000376802 COL11A2P13942 1736 aaPredicted RBP23.36■■□□□ 1.33
HLA-A-201ENST00000376802 U2AF1L5P0DN76 240 aaPredicted RBP23.35■■□□□ 1.33
HLA-A-201ENST00000376802 U2AF1Q01081 240 aaKnown RBP eCLIP23.35■■□□□ 1.33
HLA-A-201ENST00000376802 DNAJC5GQ8N7S2 189 aa23.35■■□□□ 1.33
HLA-A-201ENST00000376802 RBM46Q8TBY0 533 aaKnown RBP23.35■■□□□ 1.33
HLA-A-201ENST00000376802 PRAMEF22A3QJZ6 481 aa23.34■■□□□ 1.33
HLA-A-201ENST00000376802 CAMTA2O94983 1202 aa23.34■■□□□ 1.33
HLA-A-201ENST00000376802 PRR5LQ6MZQ0 368 aa23.34■■□□□ 1.33
HLA-A-201ENST00000376802 MCM10Q7L590 875 aa23.34■■□□□ 1.33
HLA-A-201ENST00000376802 RRAGCQ9HB90 399 aa23.34■■□□□ 1.33
HLA-A-201ENST00000376802 CCDC24Q8N4L8 307 aa23.33■■□□□ 1.33
HLA-A-201ENST00000376802 BRIP1Q9BX63 1249 aa23.33■■□□□ 1.33
HLA-A-201ENST00000376802 NFKBIEO00221 500 aa23.33■■□□□ 1.32
HLA-A-201ENST00000376802 LMNB1P20700 586 aa23.33■■□□□ 1.32
HLA-A-201ENST00000376802 TIAM2Q8IVF5 1701 aa23.32■■□□□ 1.32
HLA-A-201ENST00000376802 WDR90Q96KV7 1748 aa23.32■■□□□ 1.32
HLA-A-201ENST00000376802 FER1L6Q2WGJ9 1857 aa23.32■■□□□ 1.32
HLA-A-201ENST00000376802 PIP4K2AP48426 406 aaPredicted RBP23.32■■□□□ 1.32
HLA-A-201ENST00000376802 DCTN1Q14203 1278 aa23.32■■□□□ 1.32
HLA-A-201ENST00000376802 ZC3H4Q9UPT8 1303 aaKnown RBP23.32■■□□□ 1.32
HLA-A-201ENST00000376802 PDE6BP35913 854 aa23.31■■□□□ 1.32
HLA-A-201ENST00000376802 DZIP3Q86Y13 1208 aaKnown RBP23.31■■□□□ 1.32
HLA-A-201ENST00000376802 C16orf71Q8IYS4 520 aaPredicted RBP23.31■■□□□ 1.32
HLA-A-201ENST00000376802 RTF1Q92541 710 aaKnown RBP23.31■■□□□ 1.32
HLA-A-201ENST00000376802 SETDB2Q96T68 719 aa23.3■■□□□ 1.32
HLA-A-201ENST00000376802 DLG5Q8TDM6 1919 aa23.29■■□□□ 1.32
HLA-A-201ENST00000376802 SLX4Q8IY92 1834 aa23.29■■□□□ 1.32
HLA-A-201ENST00000376802 DICER1Q9UPY3 1922 aaKnown RBP23.29■■□□□ 1.32
HLA-A-201ENST00000376802 CACNA1SQ13698 1873 aa23.29■■□□□ 1.32
HLA-A-201ENST00000376802 HTATSF1O43719 755 aaKnown RBP23.29■■□□□ 1.32
HLA-A-201ENST00000376802 SNRPA1P09661 255 aaKnown RBP23.29■■□□□ 1.32
HLA-A-201ENST00000376802 FSTL1Q12841 308 aa23.29■■□□□ 1.32
HLA-A-201ENST00000376802 IFFO2Q5TF58 517 aa23.29■■□□□ 1.32
HLA-A-201ENST00000376802 ZNF622Q969S3 477 aaKnown RBP eCLIP23.29■■□□□ 1.32
HLA-A-201ENST00000376802 PDZRN3Q9UPQ7 1066 aa23.29■■□□□ 1.32
HLA-A-201ENST00000376802 GLTPD2A6NH11 291 aa23.27■■□□□ 1.32
HLA-A-201ENST00000376802 C21orf2O43822 256 aa23.27■■□□□ 1.32
HLA-A-201ENST00000376802 NPM2Q86SE8 214 aaKnown RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms