RNA–Protein interactions for RNA: ENST00000375608.7

MCF2L-204, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 3,648 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-204ENST00000375608 ABCA6Q8N139 1617 aa16.37■□□□□ 0.21
MCF2L-204ENST00000375608 ZNF853P0CG23 659 aa16.37■□□□□ 0.21
MCF2L-204ENST00000375608 RASEFQ8IZ41 740 aa16.37■□□□□ 0.21
MCF2L-204ENST00000375608 ZBTB9Q96C00 473 aa16.37■□□□□ 0.21
MCF2L-204ENST00000375608 PHAXQ9H814 394 aaKnown RBP16.37■□□□□ 0.21
MCF2L-204ENST00000375608 CHL1O00533 1208 aa16.36■□□□□ 0.21
MCF2L-204ENST00000375608 SMAP1Q8IYB5 467 aaPredicted RBP16.36■□□□□ 0.21
MCF2L-204ENST00000375608 PUS7Q96PZ0 661 aaKnown RBP16.36■□□□□ 0.21
MCF2L-204ENST00000375608 CCDC8Q9H0W5 538 aaPredicted RBP16.36■□□□□ 0.21
MCF2L-204ENST00000375608 DACT1Q9NYF0 836 aa16.36■□□□□ 0.21
MCF2L-204ENST00000375608 RHPN1Q8TCX5 695 aa16.36■□□□□ 0.21
MCF2L-204ENST00000375608 SLC26A8Q96RN1 970 aa16.36■□□□□ 0.21
MCF2L-204ENST00000375608 MAP3K4Q9Y6R4 1608 aa16.36■□□□□ 0.21
MCF2L-204ENST00000375608 INTS4Q96HW7 963 aaKnown RBP16.36■□□□□ 0.21
MCF2L-204ENST00000375608 ASXL2Q76L83 1435 aa16.36■□□□□ 0.21
MCF2L-204ENST00000375608 ATP8B2P98198 1209 aa16.35■□□□□ 0.21
MCF2L-204ENST00000375608 TEFQ10587 303 aa16.35■□□□□ 0.21
MCF2L-204ENST00000375608 UVSSAQ2YD98 709 aa16.35■□□□□ 0.21
MCF2L-204ENST00000375608 ANO6Q4KMQ2 910 aa16.35■□□□□ 0.21
MCF2L-204ENST00000375608 AACSQ86V21 672 aa16.35■□□□□ 0.21
MCF2L-204ENST00000375608 CHD1O14646 1710 aa16.35■□□□□ 0.21
MCF2L-204ENST00000375608 BOLA2Q9H3K6 86 aa16.35■□□□□ 0.21
MCF2L-204ENST00000375608 YTHDC2Q9H6S0 1430 aaKnown RBP16.35■□□□□ 0.21
MCF2L-204ENST00000375608 PA2G4Q9UQ80 394 aaKnown RBP16.34■□□□□ 0.21
MCF2L-204ENST00000375608 SNX14Q9Y5W7 946 aa16.34■□□□□ 0.21
MCF2L-204ENST00000375608 TRHP20396 242 aaPredicted RBP16.34■□□□□ 0.21
MCF2L-204ENST00000375608 BRPF1P55201 1214 aaPredicted RBP16.34■□□□□ 0.21
MCF2L-204ENST00000375608 CEP152O94986 1710 aa16.34■□□□□ 0.21
MCF2L-204ENST00000375608 RNF17Q9BXT8 1623 aaKnown RBP16.33■□□□□ 0.21
MCF2L-204ENST00000375608 ANAPC15P60006 121 aa16.33■□□□□ 0.21
MCF2L-204ENST00000375608 SF3A1Q15459 793 aaKnown RBP16.33■□□□□ 0.21
MCF2L-204ENST00000375608 DNAJC25Q9H1X3 360 aa16.33■□□□□ 0.21
MCF2L-204ENST00000375608 MYOM2P54296 1465 aa16.33■□□□□ 0.21
MCF2L-204ENST00000375608 GUCY1B3Q02153 619 aa16.33■□□□□ 0.2
MCF2L-204ENST00000375608 SYTL4Q96C24 671 aaPredicted RBP16.33■□□□□ 0.2
MCF2L-204ENST00000375608 IL25Q9H293 177 aa16.33■□□□□ 0.2
MCF2L-204ENST00000375608 ABCC1P33527 1531 aa16.33■□□□□ 0.2
MCF2L-204ENST00000375608 ZNF165P49910 485 aa16.33■□□□□ 0.2
MCF2L-204ENST00000375608 G3BP1Q13283 466 aaKnown RBP eCLIP16.33■□□□□ 0.2
MCF2L-204ENST00000375608 ATP2B3Q16720 1220 aa16.33■□□□□ 0.2
MCF2L-204ENST00000375608 KIF1BPQ96EK5 621 aa16.33■□□□□ 0.2
MCF2L-204ENST00000375608 LRRC2Q9BYS8 371 aa16.33■□□□□ 0.2
MCF2L-204ENST00000375608 PI4KAP2A4QPH2 592 aa16.32■□□□□ 0.2
MCF2L-204ENST00000375608 NAA30Q147X3 362 aaPredicted RBP16.32■□□□□ 0.2
MCF2L-204ENST00000375608 BLOC1S2Q6QNY1 142 aa16.32■□□□□ 0.2
MCF2L-204ENST00000375608 PI4KAP1Q8N8J0 262 aa16.32■□□□□ 0.2
MCF2L-204ENST00000375608 CLIP2Q9UDT6 1046 aa16.32■□□□□ 0.2
MCF2L-204ENST00000375608 NRBP1Q9UHY1 535 aa16.32■□□□□ 0.2
MCF2L-204ENST00000375608 LARGE1O95461 756 aa16.32■□□□□ 0.2
MCF2L-204ENST00000375608 HOMER1Q86YM7 354 aa16.32■□□□□ 0.2
MCF2L-204ENST00000375608 MYOM1P52179 1685 aa16.32■□□□□ 0.2
MCF2L-204ENST00000375608 TYRO3Q06418 890 aa16.31■□□□□ 0.2
MCF2L-204ENST00000375608 SDF4Q9BRK5 362 aa16.31■□□□□ 0.2
MCF2L-204ENST00000375608 A0A087WWV3 80 aa16.31■□□□□ 0.2
MCF2L-204ENST00000375608 RUFY3Q7L099 469 aa16.31■□□□□ 0.2
MCF2L-204ENST00000375608 SPHKAPQ2M3C7 1700 aa16.31■□□□□ 0.2
MCF2L-204ENST00000375608 CCAR2Q8N163 923 aaKnown RBP16.31■□□□□ 0.2
MCF2L-204ENST00000375608 LIG1P18858 919 aa16.3■□□□□ 0.2
MCF2L-204ENST00000375608 CUL4AQ13619 759 aa16.3■□□□□ 0.2
MCF2L-204ENST00000375608 FAM177A1Q8N128 213 aaPredicted RBP16.3■□□□□ 0.2
MCF2L-204ENST00000375608 DNAJC2Q99543 621 aaKnown RBP16.3■□□□□ 0.2
MCF2L-204ENST00000375608 PTCH1Q13635 1447 aa16.3■□□□□ 0.2
MCF2L-204ENST00000375608 PDE4CQ08493 712 aa16.3■□□□□ 0.2
MCF2L-204ENST00000375608 ADCK5Q3MIX3 580 aa16.3■□□□□ 0.2
MCF2L-204ENST00000375608 ERCC4Q92889 916 aaPredicted RBP16.3■□□□□ 0.2
MCF2L-204ENST00000375608 TPM3P06753 285 aa16.3■□□□□ 0.2
MCF2L-204ENST00000375608 ACEP12821 1306 aa16.29■□□□□ 0.2
MCF2L-204ENST00000375608 HTATSF1O43719 755 aaKnown RBP16.29■□□□□ 0.2
MCF2L-204ENST00000375608 NBPF7P0C2Y1 421 aaPredicted RBP16.29■□□□□ 0.2
MCF2L-204ENST00000375608 FAM200AQ8TCP9 573 aa16.29■□□□□ 0.2
MCF2L-204ENST00000375608 RNF20Q5VTR2 975 aa16.29■□□□□ 0.2
MCF2L-204ENST00000375608 HSPA4P34932 840 aa16.28■□□□□ 0.2
MCF2L-204ENST00000375608 GNAT3A8MTJ3 354 aa16.28■□□□□ 0.2
MCF2L-204ENST00000375608 NRDCO43847 1150 aa16.28■□□□□ 0.2
MCF2L-204ENST00000375608 GLRX3O76003 335 aaKnown RBP16.28■□□□□ 0.2
MCF2L-204ENST00000375608 PTH1RQ03431 593 aa16.28■□□□□ 0.2
MCF2L-204ENST00000375608 CCDC73Q6ZRK6 1079 aa16.28■□□□□ 0.2
MCF2L-204ENST00000375608 FAM135BQ49AJ0 1406 aa16.28■□□□□ 0.2
MCF2L-204ENST00000375608 SGSM2O43147 1006 aa16.28■□□□□ 0.2
MCF2L-204ENST00000375608 SMC2O95347 1197 aa16.28■□□□□ 0.2
MCF2L-204ENST00000375608 PDCP20941 246 aa16.28■□□□□ 0.2
MCF2L-204ENST00000375608 ZFYVE16Q7Z3T8 1539 aa16.28■□□□□ 0.2
MCF2L-204ENST00000375608 HDGFP51858 240 aaKnown RBP16.27■□□□□ 0.2
MCF2L-204ENST00000375608 CDC37L1Q7L3B6 337 aa16.27■□□□□ 0.2
MCF2L-204ENST00000375608 RBM8AQ9Y5S9 174 aaKnown RBP16.27■□□□□ 0.2
MCF2L-204ENST00000375608 GNL2Q13823 731 aaKnown RBP16.27■□□□□ 0.2
MCF2L-204ENST00000375608 HSP90AB4PQ58FF6 505 aa16.27■□□□□ 0.2
MCF2L-204ENST00000375608 STK11IPQ8N1F8 1099 aa16.27■□□□□ 0.2
MCF2L-204ENST00000375608 USP44Q9H0E7 712 aa16.27■□□□□ 0.2
MCF2L-204ENST00000375608 ME1P48163 572 aa16.27■□□□□ 0.19
MCF2L-204ENST00000375608 ZFYVE9O95405 1425 aa16.26■□□□□ 0.19
MCF2L-204ENST00000375608 ISM2Q6H9L7 571 aa16.26■□□□□ 0.19
MCF2L-204ENST00000375608 VIRMAQ69YN4 1812 aaKnown RBP16.26■□□□□ 0.19
MCF2L-204ENST00000375608 PSMA5P28066 241 aa16.26■□□□□ 0.19
MCF2L-204ENST00000375608 TTC6Q86TZ1 520 aa16.26■□□□□ 0.19
MCF2L-204ENST00000375608 ZNF330Q9Y3S2 320 aaPredicted RBP16.26■□□□□ 0.19
MCF2L-204ENST00000375608 MAP3K19Q56UN5 1328 aa16.26■□□□□ 0.19
MCF2L-204ENST00000375608 KINO60870 393 aaKnown RBP16.26■□□□□ 0.19
MCF2L-204ENST00000375608 PTPN14Q15678 1187 aa16.26■□□□□ 0.19
MCF2L-204ENST00000375608 ZNF710Q8N1W2 664 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms