RNA–Protein interactions for RNA: ENST00000375429.7

NELFE-202, Transcript of negative elongation factor complex member E, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NELFE, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-202ENST00000375429 UPF1Q92900 1129 aaKnown RBP eCLIP26.54■■□□□ 1.84
NELFE-202ENST00000375429 ZNF428Q96B54 188 aa26.54■■□□□ 1.84
NELFE-202ENST00000375429 CAMKK2Q96RR4 588 aa26.54■■□□□ 1.84
NELFE-202ENST00000375429 COL5A3P25940 1745 aaPredicted RBP26.54■■□□□ 1.84
NELFE-202ENST00000375429 STARD3NLO95772 234 aa26.54■■□□□ 1.84
NELFE-202ENST00000375429 DEFB132Q7Z7B7 95 aa26.54■■□□□ 1.84
NELFE-202ENST00000375429 LINC00116Q8NCU8 138 aa26.54■■□□□ 1.84
NELFE-202ENST00000375429 A1BGP04217 495 aa26.53■■□□□ 1.84
NELFE-202ENST00000375429 BAG6P46379 1132 aa26.53■■□□□ 1.84
NELFE-202ENST00000375429 EZH2Q15910 746 aaKnown RBP26.53■■□□□ 1.84
NELFE-202ENST00000375429 SSH1Q8WYL5 1049 aa26.53■■□□□ 1.84
NELFE-202ENST00000375429 RCAN3Q9UKA8 241 aa26.53■■□□□ 1.84
NELFE-202ENST00000375429 MYH14Q7Z406 1995 aaKnown RBP26.52■■□□□ 1.84
NELFE-202ENST00000375429 CENPBP07199 599 aaPredicted RBP26.51■■□□□ 1.83
NELFE-202ENST00000375429 PDIA6Q15084 440 aa26.51■■□□□ 1.83
NELFE-202ENST00000375429 ALDH1L2Q3SY69 923 aa26.51■■□□□ 1.83
NELFE-202ENST00000375429 BCL2L13Q9BXK5 485 aa26.51■■□□□ 1.83
NELFE-202ENST00000375429 CHMP4AQ9BY43 222 aa26.51■■□□□ 1.83
NELFE-202ENST00000375429 PIP4K2AP48426 406 aaPredicted RBP26.5■■□□□ 1.83
NELFE-202ENST00000375429 CHPF2Q9P2E5 772 aa26.5■■□□□ 1.83
NELFE-202ENST00000375429 NBPF26B4DH59 902 aa26.5■■□□□ 1.83
NELFE-202ENST00000375429 BCAR3O75815 825 aa26.5■■□□□ 1.83
NELFE-202ENST00000375429 CRKLP46109 303 aaKnown RBP26.5■■□□□ 1.83
NELFE-202ENST00000375429 NBPF14Q5TI25 921 aa26.5■■□□□ 1.83
NELFE-202ENST00000375429 NBPF10Q6P3W6 841 aaKnown RBP26.5■■□□□ 1.83
NELFE-202ENST00000375429 INTS5Q6P9B9 1019 aaKnown RBP26.5■■□□□ 1.83
NELFE-202ENST00000375429 NBPF15Q8N660 670 aa26.5■■□□□ 1.83
NELFE-202ENST00000375429 CACNA1FO60840 1977 aa26.49■■□□□ 1.83
NELFE-202ENST00000375429 ANXA1P04083 346 aa26.49■■□□□ 1.83
NELFE-202ENST00000375429 PROSER3Q2NL68 480 aa26.49■■□□□ 1.83
NELFE-202ENST00000375429 DBF4Q9UBU7 674 aaPredicted RBP26.49■■□□□ 1.83
NELFE-202ENST00000375429 SLC4A2P04920 1241 aa26.48■■□□□ 1.83
NELFE-202ENST00000375429 MRPL50Q8N5N7 158 aaKnown RBP26.48■■□□□ 1.83
NELFE-202ENST00000375429 STK31Q9BXU1 1019 aa26.48■■□□□ 1.83
NELFE-202ENST00000375429 DDX21Q9NR30 783 aaKnown RBP eCLIP26.48■■□□□ 1.83
NELFE-202ENST00000375429 SMC4Q9NTJ3 1288 aa26.48■■□□□ 1.83
NELFE-202ENST00000375429 CCDC87Q9NVE4 849 aa26.47■■□□□ 1.83
NELFE-202ENST00000375429 ZBTB1Q9Y2K1 713 aa26.47■■□□□ 1.83
NELFE-202ENST00000375429 ERBB4Q15303 1308 aa26.47■■□□□ 1.83
NELFE-202ENST00000375429 MYL6BP14649 208 aa26.46■■□□□ 1.83
NELFE-202ENST00000375429 CANXP27824 592 aaKnown RBP26.46■■□□□ 1.83
NELFE-202ENST00000375429 RC3H1Q5TC82 1133 aaKnown RBP26.46■■□□□ 1.83
NELFE-202ENST00000375429 CNTNAP4Q9C0A0 1308 aa26.45■■□□□ 1.83
NELFE-202ENST00000375429 C4BP0C0L5 1744 aa26.45■■□□□ 1.83
NELFE-202ENST00000375429 RREB1Q92766 1687 aa26.45■■□□□ 1.82
NELFE-202ENST00000375429 LRP10Q7Z4F1 713 aa26.45■■□□□ 1.82
NELFE-202ENST00000375429 G2E3Q7L622 706 aa26.44■■□□□ 1.82
NELFE-202ENST00000375429 BRPF1P55201 1214 aaPredicted RBP26.43■■□□□ 1.82
NELFE-202ENST00000375429 PHAXQ9H814 394 aaKnown RBP26.43■■□□□ 1.82
NELFE-202ENST00000375429 HYPKQ9NX55 129 aa26.42■■□□□ 1.82
NELFE-202ENST00000375429 HMGB2P26583 209 aaKnown RBP26.41■■□□□ 1.82
NELFE-202ENST00000375429 IL6STP40189 918 aaPredicted RBP26.4■■□□□ 1.82
NELFE-202ENST00000375429 RPS6KA4O75676 772 aa26.39■■□□□ 1.82
NELFE-202ENST00000375429 EIF5P55010 431 aaKnown RBP26.39■■□□□ 1.82
NELFE-202ENST00000375429 AK7Q96M32 723 aa26.39■■□□□ 1.82
NELFE-202ENST00000375429 NOB1Q9ULX3 412 aaKnown RBP26.39■■□□□ 1.82
NELFE-202ENST00000375429 ZNF330Q9Y3S2 320 aaPredicted RBP26.39■■□□□ 1.82
NELFE-202ENST00000375429 NUP188Q5SRE5 1749 aa26.39■■□□□ 1.81
NELFE-202ENST00000375429 GNPATO15228 680 aa26.38■■□□□ 1.81
NELFE-202ENST00000375429 SMIM5Q71RC9 77 aa26.38■■□□□ 1.81
NELFE-202ENST00000375429 AKT1S1Q96B36 256 aa26.38■■□□□ 1.81
NELFE-202ENST00000375429 AIMP1Q12904 312 aaKnown RBP26.37■■□□□ 1.81
NELFE-202ENST00000375429 FLIIQ13045 1269 aa26.37■■□□□ 1.81
NELFE-202ENST00000375429 COPS6Q7L5N1 327 aa26.37■■□□□ 1.81
NELFE-202ENST00000375429 AMIGO3Q86WK7 504 aa26.37■■□□□ 1.81
NELFE-202ENST00000375429 XAGE3Q8WTP9 111 aa26.37■■□□□ 1.81
NELFE-202ENST00000375429 ZNF827Q17R98 1081 aa26.37■■□□□ 1.81
NELFE-202ENST00000375429 FRAT1Q92837 279 aaPredicted RBP26.37■■□□□ 1.81
NELFE-202ENST00000375429 SUPT16HQ9Y5B9 1047 aaKnown RBP26.37■■□□□ 1.81
NELFE-202ENST00000375429 UBR3Q6ZT12 1888 aa26.36■■□□□ 1.81
NELFE-202ENST00000375429 RTCBQ9Y3I0 505 aaKnown RBP26.36■■□□□ 1.81
NELFE-202ENST00000375429 KIF16BQ96L93 1317 aa26.35■■□□□ 1.81
NELFE-202ENST00000375429 TTLL7Q6ZT98 887 aa26.35■■□□□ 1.81
NELFE-202ENST00000375429 PLIN1O60240 522 aa26.33■■□□□ 1.81
NELFE-202ENST00000375429 ANO8Q9HCE9 1232 aaPredicted RBP26.33■■□□□ 1.81
NELFE-202ENST00000375429 FKBP5Q13451 457 aaPredicted RBP26.33■■□□□ 1.8
NELFE-202ENST00000375429 COL15A1P39059 1388 aa26.33■■□□□ 1.8
NELFE-202ENST00000375429 PTPRCP08575 1304 aa26.32■■□□□ 1.8
NELFE-202ENST00000375429 NPM2Q86SE8 214 aaKnown RBP26.32■■□□□ 1.8
NELFE-202ENST00000375429 ARXQ96QS3 562 aa26.32■■□□□ 1.8
NELFE-202ENST00000375429 TUBGCP6Q96RT7 1819 aa26.31■■□□□ 1.8
NELFE-202ENST00000375429 IPO8O15397 1037 aaKnown RBP26.31■■□□□ 1.8
NELFE-202ENST00000375429 ZKSCAN2Q63HK3 967 aa26.31■■□□□ 1.8
NELFE-202ENST00000375429 ARHGAP45Q92619 1136 aa26.31■■□□□ 1.8
NELFE-202ENST00000375429 TFCP2L1Q9NZI6 479 aa26.31■■□□□ 1.8
NELFE-202ENST00000375429 TBC1D2BQ9UPU7 963 aa26.31■■□□□ 1.8
NELFE-202ENST00000375429 TNNQ9UQP3 1299 aa26.31■■□□□ 1.8
NELFE-202ENST00000375429 PHF14O94880 888 aa26.3■■□□□ 1.8
NELFE-202ENST00000375429 SLC15A2Q16348 729 aa26.3■■□□□ 1.8
NELFE-202ENST00000375429 ANKRD13DQ6ZTN6 518 aa26.3■■□□□ 1.8
NELFE-202ENST00000375429 DZIP3Q86Y13 1208 aaKnown RBP26.3■■□□□ 1.8
NELFE-202ENST00000375429 ARHGEF1Q92888 912 aaKnown RBP26.3■■□□□ 1.8
NELFE-202ENST00000375429 RNF123Q5XPI4 1314 aa26.3■■□□□ 1.8
NELFE-202ENST00000375429 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.29■■□□□ 1.8
NELFE-202ENST00000375429 RRP1P56182 461 aaKnown RBP26.29■■□□□ 1.8
NELFE-202ENST00000375429 TRAPPC3LQ5T215 181 aa26.29■■□□□ 1.8
NELFE-202ENST00000375429 STK32BQ9NY57 414 aa26.29■■□□□ 1.8
NELFE-202ENST00000375429 A0A087WZG4 1122 aa26.29■■□□□ 1.8
NELFE-202ENST00000375429 PI4KAP2A4QPH2 592 aa26.29■■□□□ 1.8
NELFE-202ENST00000375429 F6X3S4 739 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms