RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 STK31Q9BXU1 1019 aa15.08■□□□□ 0.01
HMGCL-202ENST00000374487 C22orf23Q9BZE7 217 aa15.08■□□□□ 0.01
HMGCL-202ENST00000374487 SHANK3Q9BYB0 1731 aa15.08■□□□□ 0.01
HMGCL-202ENST00000374487 BMP2KLQ5H9B9 411 aa15.07■□□□□ 0
HMGCL-202ENST00000374487 CCDC125Q86Z20 511 aa15.07■□□□□ 0
HMGCL-202ENST00000374487 NFKBIBQ15653 356 aa15.07■□□□□ 0
HMGCL-202ENST00000374487 TNS1Q9HBL0 1735 aaKnown RBP15.07■□□□□ 0
HMGCL-202ENST00000374487 MAP3K5Q99683 1374 aa15.06■□□□□ 0
HMGCL-202ENST00000374487 SLC4A10Q6U841 1118 aa15.06■□□□□ 0
HMGCL-202ENST00000374487 RPAP2Q8IXW5 612 aaPredicted RBP15.06■□□□□ 0
HMGCL-202ENST00000374487 SYTL4Q96C24 671 aaPredicted RBP15.06■□□□□ 0
HMGCL-202ENST00000374487 PRIM1P49642 420 aaKnown RBP15.05■□□□□ 0
HMGCL-202ENST00000374487 CCDC30Q5VVM6 783 aa15.05■□□□□ 0
HMGCL-202ENST00000374487 IL17REQ8NFR9 667 aa15.05■□□□□ 0
HMGCL-202ENST00000374487 TAF7Q15545 349 aaPredicted RBP15.05■□□□□ -0
HMGCL-202ENST00000374487 ANKRD44Q8N8A2 993 aa15.05■□□□□ -0
HMGCL-202ENST00000374487 CAMKK2Q96RR4 588 aa15.05■□□□□ -0
HMGCL-202ENST00000374487 BCL11AQ9H165 835 aa15.05■□□□□ -0
HMGCL-202ENST00000374487 DCTPP1Q9H773 170 aa15.05■□□□□ -0
HMGCL-202ENST00000374487 SBF2Q86WG5 1849 aa15.05■□□□□ -0
HMGCL-202ENST00000374487 BAG6P46379 1132 aa15.04■□□□□ -0
HMGCL-202ENST00000374487 G2E3Q7L622 706 aa15.04■□□□□ -0
HMGCL-202ENST00000374487 CCT4P50991 539 aaKnown RBP15.04■□□□□ -0
HMGCL-202ENST00000374487 MEIS3Q99687 375 aa15.04■□□□□ -0
HMGCL-202ENST00000374487 BCL11BQ9C0K0 894 aaPredicted RBP15.04■□□□□ -0
HMGCL-202ENST00000374487 F6X3S4 739 aa15.03■□□□□ -0
HMGCL-202ENST00000374487 KCNQ4P56696 695 aa15.03■□□□□ -0
HMGCL-202ENST00000374487 PROM2Q8N271 834 aa15.03■□□□□ -0
HMGCL-202ENST00000374487 BABAM1Q9NWV8 329 aa15.03■□□□□ -0
HMGCL-202ENST00000374487 CEP85Q6P2H3 762 aa15.02■□□□□ -0
HMGCL-202ENST00000374487 TBC1D2Q9BYX2 928 aa15.02■□□□□ -0
HMGCL-202ENST00000374487 NECTIN2Q92692 538 aa15.02□□□□□ -0.01
HMGCL-202ENST00000374487 PCDH11XQ9BZA7 1347 aa15.02□□□□□ -0.01
HMGCL-202ENST00000374487 PCDH11YQ9BZA8 1340 aa15.02□□□□□ -0.01
HMGCL-202ENST00000374487 SRCAPQ6ZRS2 3230 aa15.01□□□□□ -0.01
HMGCL-202ENST00000374487 FKBP5Q13451 457 aaPredicted RBP15.01□□□□□ -0.01
HMGCL-202ENST00000374487 SLKQ9H2G2 1235 aaPredicted RBP15.01□□□□□ -0.01
HMGCL-202ENST00000374487 SPG7Q9UQ90 795 aa15.01□□□□□ -0.01
HMGCL-202ENST00000374487 SOS1Q07889 1333 aaPredicted RBP15.01□□□□□ -0.01
HMGCL-202ENST00000374487 PHKG2P15735 406 aa15.01□□□□□ -0.01
HMGCL-202ENST00000374487 BCL9O00512 1426 aa15.01□□□□□ -0.01
HMGCL-202ENST00000374487 KAT6BQ8WYB5 2073 aa15.01□□□□□ -0.01
HMGCL-202ENST00000374487 HMMRO75330 724 aa15□□□□□ -0.01
HMGCL-202ENST00000374487 FLIIQ13045 1269 aa15□□□□□ -0.01
HMGCL-202ENST00000374487 PKD1L3Q7Z443 1732 aa15□□□□□ -0.01
HMGCL-202ENST00000374487 ATP10DQ9P241 1426 aa15□□□□□ -0.01
HMGCL-202ENST00000374487 PSDA5PKW4 1024 aaPredicted RBP15□□□□□ -0.01
HMGCL-202ENST00000374487 ZNF530Q6P9A1 599 aaPredicted RBP15□□□□□ -0.01
HMGCL-202ENST00000374487 MPRIPQ6WCQ1 1025 aa15□□□□□ -0.01
HMGCL-202ENST00000374487 DOT1LQ8TEK3 1739 aa14.99□□□□□ -0.01
HMGCL-202ENST00000374487 APBB1O00213 710 aa14.99□□□□□ -0.01
HMGCL-202ENST00000374487 PLEKHM2Q8IWE5 1019 aa14.99□□□□□ -0.01
HMGCL-202ENST00000374487 TOGARAM1Q9Y4F4 1720 aa14.98□□□□□ -0.01
HMGCL-202ENST00000374487 GNAI2P04899 355 aa14.98□□□□□ -0.01
HMGCL-202ENST00000374487 RBM25P49756 843 aaKnown RBP14.98□□□□□ -0.01
HMGCL-202ENST00000374487 PLEKHO1Q53GL0 409 aaPredicted RBP14.98□□□□□ -0.01
HMGCL-202ENST00000374487 TBC1D9Q6ZT07 1266 aa14.98□□□□□ -0.01
HMGCL-202ENST00000374487 IFNL2Q8IZJ0 200 aa14.98□□□□□ -0.01
HMGCL-202ENST00000374487 NHSQ6T4R5 1651 aa14.98□□□□□ -0.01
HMGCL-202ENST00000374487 FRAT2O75474 233 aaPredicted RBP14.97□□□□□ -0.01
HMGCL-202ENST00000374487 HDGFL1Q5TGJ6 251 aa14.97□□□□□ -0.01
HMGCL-202ENST00000374487 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.97□□□□□ -0.01
HMGCL-202ENST00000374487 CDC45O75419 566 aa14.97□□□□□ -0.01
HMGCL-202ENST00000374487 C16orf71Q8IYS4 520 aaPredicted RBP14.97□□□□□ -0.01
HMGCL-202ENST00000374487 BTAF1O14981 1849 aa14.96□□□□□ -0.01
HMGCL-202ENST00000374487 EIF5BO60841 1220 aaKnown RBP14.96□□□□□ -0.01
HMGCL-202ENST00000374487 GNAI3P08754 354 aa14.96□□□□□ -0.01
HMGCL-202ENST00000374487 TEFQ10587 303 aa14.96□□□□□ -0.01
HMGCL-202ENST00000374487 NKX1-1Q15270 411 aaPredicted RBP14.96□□□□□ -0.01
HMGCL-202ENST00000374487 TXNRD1Q16881 649 aa14.96□□□□□ -0.01
HMGCL-202ENST00000374487 AMOTQ4VCS5 1084 aa14.96□□□□□ -0.01
HMGCL-202ENST00000374487 HSCBQ8IWL3 235 aa14.96□□□□□ -0.01
HMGCL-202ENST00000374487 SPRYD3Q8NCJ5 442 aa14.96□□□□□ -0.01
HMGCL-202ENST00000374487 PIGBQ92521 554 aa14.96□□□□□ -0.01
HMGCL-202ENST00000374487 LGR6Q9HBX8 967 aa14.96□□□□□ -0.01
HMGCL-202ENST00000374487 LRRC4BQ9NT99 713 aa14.96□□□□□ -0.01
HMGCL-202ENST00000374487 PLSCR1O15162 318 aa14.95□□□□□ -0.02
HMGCL-202ENST00000374487 AKAP4Q5JQC9 854 aa14.95□□□□□ -0.02
HMGCL-202ENST00000374487 CHMP4AQ9BY43 222 aa14.95□□□□□ -0.02
HMGCL-202ENST00000374487 ANO8Q9HCE9 1232 aaPredicted RBP14.95□□□□□ -0.02
HMGCL-202ENST00000374487 CEMIPQ8WUJ3 1361 aa14.95□□□□□ -0.02
HMGCL-202ENST00000374487 KDM6AO15550 1401 aaPredicted RBP14.95□□□□□ -0.02
HMGCL-202ENST00000374487 R3HDM1Q15032 1099 aaKnown RBP14.95□□□□□ -0.02
HMGCL-202ENST00000374487 C1orf141Q5JVX7 400 aa14.95□□□□□ -0.02
HMGCL-202ENST00000374487 TTC22Q5TAA0 569 aa14.95□□□□□ -0.02
HMGCL-202ENST00000374487 SMARCA5O60264 1052 aaPredicted RBP14.94□□□□□ -0.02
HMGCL-202ENST00000374487 GSPT1P15170 499 aaKnown RBP14.94□□□□□ -0.02
HMGCL-202ENST00000374487 EIF2S2P20042 333 aaKnown RBP14.94□□□□□ -0.02
HMGCL-202ENST00000374487 ANTXR1Q9H6X2 564 aa14.94□□□□□ -0.02
HMGCL-202ENST00000374487 BTBD11A6QL63 1104 aa14.93□□□□□ -0.02
HMGCL-202ENST00000374487 PDGFDQ9GZP0 370 aaPredicted RBP14.93□□□□□ -0.02
HMGCL-202ENST00000374487 ASAP1Q9ULH1 1129 aa14.93□□□□□ -0.02
HMGCL-202ENST00000374487 EIF4A1P60842 406 aaKnown RBP14.92□□□□□ -0.02
HMGCL-202ENST00000374487 OTUD7AQ8TE49 926 aaPredicted RBP14.92□□□□□ -0.02
HMGCL-202ENST00000374487 GSE1Q14687 1217 aa14.92□□□□□ -0.02
HMGCL-202ENST00000374487 CASC1Q6TDU7 716 aa14.92□□□□□ -0.02
HMGCL-202ENST00000374487 PHAXQ9H814 394 aaKnown RBP14.91□□□□□ -0.02
HMGCL-202ENST00000374487 NUP188Q5SRE5 1749 aa14.91□□□□□ -0.02
HMGCL-202ENST00000374487 HOXB7P09629 217 aa14.91□□□□□ -0.02
HMGCL-202ENST00000374487 NFATC2IPQ8NCF5 419 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms