RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 RILPL2Q969X0 211 aa20.99■□□□□ 0.95
LDLRAP1-201ENST00000374338 LMBRD1Q9NUN5 540 aa20.99■□□□□ 0.95
LDLRAP1-201ENST00000374338 LRRFIP2Q9Y608 721 aaKnown RBP20.99■□□□□ 0.95
LDLRAP1-201ENST00000374338 IGSF1Q8N6C5 1336 aa20.99■□□□□ 0.95
LDLRAP1-201ENST00000374338 PSME1Q06323 249 aa20.99■□□□□ 0.95
LDLRAP1-201ENST00000374338 SSH2Q76I76 1423 aa20.99■□□□□ 0.95
LDLRAP1-201ENST00000374338 GPT2Q8TD30 523 aa20.98■□□□□ 0.95
LDLRAP1-201ENST00000374338 FOXD4L6Q3SYB3 417 aaPredicted RBP20.98■□□□□ 0.95
LDLRAP1-201ENST00000374338 FOXD4L3Q6VB84 417 aaPredicted RBP20.98■□□□□ 0.95
LDLRAP1-201ENST00000374338 RPAP2Q8IXW5 612 aaPredicted RBP20.98■□□□□ 0.95
LDLRAP1-201ENST00000374338 TTC21AQ8NDW8 1320 aa20.97■□□□□ 0.95
LDLRAP1-201ENST00000374338 PHF8Q9UPP1 1060 aa20.97■□□□□ 0.95
LDLRAP1-201ENST00000374338 TRIM6-TRIM34B2RNG4 842 aa20.97■□□□□ 0.95
LDLRAP1-201ENST00000374338 TAF3Q5VWG9 929 aa20.96■□□□□ 0.95
LDLRAP1-201ENST00000374338 PRAMEF22A3QJZ6 481 aa20.96■□□□□ 0.95
LDLRAP1-201ENST00000374338 HDGFL1Q5TGJ6 251 aa20.96■□□□□ 0.95
LDLRAP1-201ENST00000374338 NUTM1Q86Y26 1132 aa20.96■□□□□ 0.95
LDLRAP1-201ENST00000374338 DDX17Q92841 729 aaKnown RBP20.96■□□□□ 0.95
LDLRAP1-201ENST00000374338 PTPRCP08575 1304 aa20.96■□□□□ 0.95
LDLRAP1-201ENST00000374338 DNTTIP2Q5QJE6 756 aaKnown RBP20.95■□□□□ 0.94
LDLRAP1-201ENST00000374338 DIP2AQ14689 1571 aa20.95■□□□□ 0.94
LDLRAP1-201ENST00000374338 GTF2F1P35269 517 aaKnown RBP eCLIP20.95■□□□□ 0.94
LDLRAP1-201ENST00000374338 KIAA2012Q0VF49 1180 aa20.95■□□□□ 0.94
LDLRAP1-201ENST00000374338 TMEM63CQ9P1W3 806 aa20.95■□□□□ 0.94
LDLRAP1-201ENST00000374338 ARHGEF10O15013 1369 aa20.95■□□□□ 0.94
LDLRAP1-201ENST00000374338 SPDYE4A6NLX3 237 aa20.94■□□□□ 0.94
LDLRAP1-201ENST00000374338 ZBTB22O15209 634 aa20.94■□□□□ 0.94
LDLRAP1-201ENST00000374338 GNAI2P04899 355 aa20.94■□□□□ 0.94
LDLRAP1-201ENST00000374338 PRIMPOLQ96LW4 560 aa20.94■□□□□ 0.94
LDLRAP1-201ENST00000374338 IGSF3O75054 1194 aa20.94■□□□□ 0.94
LDLRAP1-201ENST00000374338 UNC5CLQ8IV45 518 aa20.94■□□□□ 0.94
LDLRAP1-201ENST00000374338 C17orf53Q8N3J3 647 aaPredicted RBP20.94■□□□□ 0.94
LDLRAP1-201ENST00000374338 USP26Q9BXU7 913 aa20.94■□□□□ 0.94
LDLRAP1-201ENST00000374338 KIAA0232Q92628 1395 aa20.94■□□□□ 0.94
LDLRAP1-201ENST00000374338 NRKQ7Z2Y5 1582 aa20.94■□□□□ 0.94
LDLRAP1-201ENST00000374338 PLCD3Q8N3E9 789 aa20.93■□□□□ 0.94
LDLRAP1-201ENST00000374338 CGNQ9P2M7 1197 aaKnown RBP20.93■□□□□ 0.94
LDLRAP1-201ENST00000374338 PDE1AP54750 535 aa20.93■□□□□ 0.94
LDLRAP1-201ENST00000374338 TAF7Q15545 349 aaPredicted RBP20.92■□□□□ 0.94
LDLRAP1-201ENST00000374338 CCDC30Q5VVM6 783 aa20.92■□□□□ 0.94
LDLRAP1-201ENST00000374338 HMGN5P82970 282 aaKnown RBP20.92■□□□□ 0.94
LDLRAP1-201ENST00000374338 CHPF2Q9P2E5 772 aa20.92■□□□□ 0.94
LDLRAP1-201ENST00000374338 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.91■□□□□ 0.94
LDLRAP1-201ENST00000374338 LARP6Q9BRS8 491 aaKnown RBP20.91■□□□□ 0.94
LDLRAP1-201ENST00000374338 PTMAP06454 111 aaKnown RBP20.9■□□□□ 0.94
LDLRAP1-201ENST00000374338 NBPF7P0C2Y1 421 aaPredicted RBP20.9■□□□□ 0.94
LDLRAP1-201ENST00000374338 CCT4P50991 539 aaKnown RBP20.9■□□□□ 0.94
LDLRAP1-201ENST00000374338 USP44Q9H0E7 712 aa20.9■□□□□ 0.94
LDLRAP1-201ENST00000374338 PIK3C2AO00443 1686 aa20.9■□□□□ 0.94
LDLRAP1-201ENST00000374338 HAP1P54257 671 aaPredicted RBP20.9■□□□□ 0.94
LDLRAP1-201ENST00000374338 KDRP35968 1356 aa20.89■□□□□ 0.94
LDLRAP1-201ENST00000374338 ZC3H6P61129 1189 aaKnown RBP20.89■□□□□ 0.94
LDLRAP1-201ENST00000374338 IL25Q9H293 177 aa20.89■□□□□ 0.94
LDLRAP1-201ENST00000374338 ZDHHC9Q9Y397 364 aa20.89■□□□□ 0.94
LDLRAP1-201ENST00000374338 HMMRO75330 724 aa20.89■□□□□ 0.93
LDLRAP1-201ENST00000374338 KIF3AQ9Y496 699 aa20.89■□□□□ 0.93
LDLRAP1-201ENST00000374338 LRSAM1Q6UWE0 723 aa20.88■□□□□ 0.93
LDLRAP1-201ENST00000374338 TOPAZ1Q8N9V7 1692 aa20.88■□□□□ 0.93
LDLRAP1-201ENST00000374338 PI4KAP2A4QPH2 592 aa20.88■□□□□ 0.93
LDLRAP1-201ENST00000374338 PIP4K2AP48426 406 aaPredicted RBP20.88■□□□□ 0.93
LDLRAP1-201ENST00000374338 PI4KAP1Q8N8J0 262 aa20.88■□□□□ 0.93
LDLRAP1-201ENST00000374338 ZNF530Q6P9A1 599 aaPredicted RBP20.88■□□□□ 0.93
LDLRAP1-201ENST00000374338 PALD1Q9ULE6 856 aa20.88■□□□□ 0.93
LDLRAP1-201ENST00000374338 MAP3K5Q99683 1374 aa20.87■□□□□ 0.93
LDLRAP1-201ENST00000374338 LRRCC1Q9C099 1032 aa20.87■□□□□ 0.93
LDLRAP1-201ENST00000374338 BCL2L12Q9HB09 334 aa20.87■□□□□ 0.93
LDLRAP1-201ENST00000374338 SURF6O75683 361 aaKnown RBP20.87■□□□□ 0.93
LDLRAP1-201ENST00000374338 UBTFL1P0CB47 393 aaPredicted RBP20.87■□□□□ 0.93
LDLRAP1-201ENST00000374338 AIMP1Q12904 312 aaKnown RBP20.87■□□□□ 0.93
LDLRAP1-201ENST00000374338 PDCL2Q8N4E4 241 aa20.87■□□□□ 0.93
LDLRAP1-201ENST00000374338 ANO2Q9NQ90 1003 aa20.87■□□□□ 0.93
LDLRAP1-201ENST00000374338 PROSER3Q2NL68 480 aa20.86■□□□□ 0.93
LDLRAP1-201ENST00000374338 AXIN2Q9Y2T1 843 aa20.86■□□□□ 0.93
LDLRAP1-201ENST00000374338 ANKLE2Q86XL3 938 aa20.86■□□□□ 0.93
LDLRAP1-201ENST00000374338 UPF3BQ9BZI7 483 aaKnown RBP20.86■□□□□ 0.93
LDLRAP1-201ENST00000374338 PPP1R42Q7Z4L9 355 aa20.85■□□□□ 0.93
LDLRAP1-201ENST00000374338 RGPD1P0DJD0 1748 aa20.85■□□□□ 0.93
LDLRAP1-201ENST00000374338 MX1P20591 662 aa20.84■□□□□ 0.93
LDLRAP1-201ENST00000374338 NEK4P51957 841 aa20.84■□□□□ 0.93
LDLRAP1-201ENST00000374338 TEFQ10587 303 aa20.84■□□□□ 0.93
LDLRAP1-201ENST00000374338 GDPD2Q9HCC8 539 aa20.84■□□□□ 0.93
LDLRAP1-201ENST00000374338 BTBD11A6QL63 1104 aa20.84■□□□□ 0.93
LDLRAP1-201ENST00000374338 CYP2E1P05181 493 aaPredicted RBP20.84■□□□□ 0.93
LDLRAP1-201ENST00000374338 CDK11BP21127 795 aaKnown RBP20.84■□□□□ 0.93
LDLRAP1-201ENST00000374338 ZNF771Q7L3S4 317 aaPredicted RBP20.84■□□□□ 0.93
LDLRAP1-201ENST00000374338 SRGAP3O43295 1099 aa20.84■□□□□ 0.93
LDLRAP1-201ENST00000374338 U2AF2P26368 475 aaKnown RBP eCLIP20.84■□□□□ 0.93
LDLRAP1-201ENST00000374338 NOLC1Q14978 699 aaKnown RBP eCLIP20.84■□□□□ 0.93
LDLRAP1-201ENST00000374338 CASC1Q6TDU7 716 aa20.84■□□□□ 0.93
LDLRAP1-201ENST00000374338 PIBF1Q8WXW3 757 aa20.83■□□□□ 0.93
LDLRAP1-201ENST00000374338 NUCB2P80303 420 aa20.83■□□□□ 0.92
LDLRAP1-201ENST00000374338 SLC39A6Q13433 755 aa20.83■□□□□ 0.92
LDLRAP1-201ENST00000374338 CABLES1Q8TDN4 633 aa20.83■□□□□ 0.92
LDLRAP1-201ENST00000374338 ATP8B2P98198 1209 aa20.82■□□□□ 0.92
LDLRAP1-201ENST00000374338 PAXIP1Q6ZW49 1069 aaPredicted RBP20.82■□□□□ 0.92
LDLRAP1-201ENST00000374338 DDX54Q8TDD1 881 aaKnown RBP20.82■□□□□ 0.92
LDLRAP1-201ENST00000374338 ERC2O15083 957 aa20.82■□□□□ 0.92
LDLRAP1-201ENST00000374338 CWF19L2Q2TBE0 894 aaKnown RBP20.82■□□□□ 0.92
LDLRAP1-201ENST00000374338 AEBP2Q6ZN18 517 aaPredicted RBP20.82■□□□□ 0.92
LDLRAP1-201ENST00000374338 IP6K1Q92551 441 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms