RNA–Protein interactions for RNA: ENST00000373997.7

A1CF-204, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene A1CF, Length 2,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-204ENST00000373997 PAPPAQ13219 1627 aa16.52■□□□□ 0.24
A1CF-204ENST00000373997 ZNF790Q6PG37 636 aa16.52■□□□□ 0.24
A1CF-204ENST00000373997 CHMP4BQ9H444 224 aaKnown RBP16.52■□□□□ 0.24
A1CF-204ENST00000373997 HEG1Q9ULI3 1381 aa16.52■□□□□ 0.23
A1CF-204ENST00000373997 PHAXQ9H814 394 aaKnown RBP16.52■□□□□ 0.23
A1CF-204ENST00000373997 GIGYF1O75420 1035 aaPredicted RBP16.51■□□□□ 0.23
A1CF-204ENST00000373997 ANXA1P04083 346 aa16.51■□□□□ 0.23
A1CF-204ENST00000373997 SMC5Q8IY18 1101 aa16.51■□□□□ 0.23
A1CF-204ENST00000373997 SLKQ9H2G2 1235 aaPredicted RBP16.51■□□□□ 0.23
A1CF-204ENST00000373997 DISP2A7MBM2 1401 aa16.51■□□□□ 0.23
A1CF-204ENST00000373997 GLI3P10071 1580 aa16.5■□□□□ 0.23
A1CF-204ENST00000373997 TTC5Q8N0Z6 440 aa16.5■□□□□ 0.23
A1CF-204ENST00000373997 PXDNLA1KZ92 1463 aa16.48■□□□□ 0.23
A1CF-204ENST00000373997 ZNF496Q96IT1 587 aaPredicted RBP16.48■□□□□ 0.23
A1CF-204ENST00000373997 CHMP4AQ9BY43 222 aa16.48■□□□□ 0.23
A1CF-204ENST00000373997 C22orf23Q9BZE7 217 aa16.48■□□□□ 0.23
A1CF-204ENST00000373997 CCT4P50991 539 aaKnown RBP16.48■□□□□ 0.23
A1CF-204ENST00000373997 MEIS3Q99687 375 aa16.48■□□□□ 0.23
A1CF-204ENST00000373997 DOT1LQ8TEK3 1739 aa16.48■□□□□ 0.23
A1CF-204ENST00000373997 NKX1-1Q15270 411 aaPredicted RBP16.47■□□□□ 0.23
A1CF-204ENST00000373997 L1TD1Q5T7N2 865 aaKnown RBP16.47■□□□□ 0.23
A1CF-204ENST00000373997 PROSER3Q2NL68 480 aa16.46■□□□□ 0.23
A1CF-204ENST00000373997 CERKQ8TCT0 537 aa16.46■□□□□ 0.23
A1CF-204ENST00000373997 DBF4Q9UBU7 674 aaPredicted RBP16.46■□□□□ 0.23
A1CF-204ENST00000373997 ERVV-2B6SEH9 535 aa16.46■□□□□ 0.23
A1CF-204ENST00000373997 JCADQ9P266 1359 aa16.46■□□□□ 0.23
A1CF-204ENST00000373997 SLIT2O94813 1529 aa16.45■□□□□ 0.22
A1CF-204ENST00000373997 FMNL2Q96PY5 1086 aa16.45■□□□□ 0.22
A1CF-204ENST00000373997 KCPQ6ZWJ8 1503 aa16.44■□□□□ 0.22
A1CF-204ENST00000373997 TNS2Q63HR2 1409 aa16.44■□□□□ 0.22
A1CF-204ENST00000373997 ATP10DQ9P241 1426 aa16.44■□□□□ 0.22
A1CF-204ENST00000373997 FAM43AQ8N2R8 423 aa16.44■□□□□ 0.22
A1CF-204ENST00000373997 CHMP5Q9NZZ3 219 aa16.44■□□□□ 0.22
A1CF-204ENST00000373997 CCDC9Q9Y3X0 531 aaKnown RBP16.44■□□□□ 0.22
A1CF-204ENST00000373997 SPATA31A1Q5TZJ5 1347 aa16.44■□□□□ 0.22
A1CF-204ENST00000373997 MFAP1P55081 439 aaKnown RBP16.43■□□□□ 0.22
A1CF-204ENST00000373997 SIRT2Q8IXJ6 389 aa16.43■□□□□ 0.22
A1CF-204ENST00000373997 AFDNP55196 1824 aaKnown RBP16.43■□□□□ 0.22
A1CF-204ENST00000373997 SNRPA1P09661 255 aaKnown RBP16.43■□□□□ 0.22
A1CF-204ENST00000373997 NUCB1Q02818 461 aa16.43■□□□□ 0.22
A1CF-204ENST00000373997 LRP6O75581 1613 aa16.43■□□□□ 0.22
A1CF-204ENST00000373997 ADCY9O60503 1353 aa16.42■□□□□ 0.22
A1CF-204ENST00000373997 PI4KAP2A4QPH2 592 aa16.42■□□□□ 0.22
A1CF-204ENST00000373997 PI4KAP1Q8N8J0 262 aa16.42■□□□□ 0.22
A1CF-204ENST00000373997 C8orf37Q96NL8 207 aa16.42■□□□□ 0.22
A1CF-204ENST00000373997 ARFGEF2Q9Y6D5 1785 aa16.42■□□□□ 0.22
A1CF-204ENST00000373997 MYL6BP14649 208 aa16.42■□□□□ 0.22
A1CF-204ENST00000373997 DDX21Q9NR30 783 aaKnown RBP eCLIP16.42■□□□□ 0.22
A1CF-204ENST00000373997 TMOD3Q9NYL9 352 aa16.42■□□□□ 0.22
A1CF-204ENST00000373997 USP16Q9Y5T5 823 aa16.42■□□□□ 0.22
A1CF-204ENST00000373997 EXOC5O00471 708 aa16.41■□□□□ 0.22
A1CF-204ENST00000373997 MCM4P33991 863 aa16.41■□□□□ 0.22
A1CF-204ENST00000373997 PIP4K2AP48426 406 aaPredicted RBP16.41■□□□□ 0.22
A1CF-204ENST00000373997 AIMP1Q12904 312 aaKnown RBP16.41■□□□□ 0.22
A1CF-204ENST00000373997 DNAAF4Q8WXU2 420 aa16.41■□□□□ 0.22
A1CF-204ENST00000373997 HYPKQ9NX55 129 aa16.41■□□□□ 0.22
A1CF-204ENST00000373997 RBM25P49756 843 aaKnown RBP16.4■□□□□ 0.22
A1CF-204ENST00000373997 PDIA6Q15084 440 aa16.4■□□□□ 0.22
A1CF-204ENST00000373997 HSCBQ8IWL3 235 aa16.4■□□□□ 0.22
A1CF-204ENST00000373997 SPATA31A5Q5VU36 1347 aa16.4■□□□□ 0.22
A1CF-204ENST00000373997 SPATA31A7Q8IWB4 1347 aa16.4■□□□□ 0.22
A1CF-204ENST00000373997 PTCD1O75127 700 aaKnown RBP16.4■□□□□ 0.22
A1CF-204ENST00000373997 CEP85Q6P2H3 762 aa16.4■□□□□ 0.22
A1CF-204ENST00000373997 ANKRD44Q8N8A2 993 aa16.39■□□□□ 0.21
A1CF-204ENST00000373997 NGLY1Q96IV0 654 aa16.39■□□□□ 0.21
A1CF-204ENST00000373997 SRCIN1Q9C0H9 1055 aa16.39■□□□□ 0.21
A1CF-204ENST00000373997 MAP3K2Q9Y2U5 619 aa16.39■□□□□ 0.21
A1CF-204ENST00000373997 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.39■□□□□ 0.21
A1CF-204ENST00000373997 CHD1LQ86WJ1 897 aa16.39■□□□□ 0.21
A1CF-204ENST00000373997 SNX21Q969T3 373 aa16.39■□□□□ 0.21
A1CF-204ENST00000373997 ANO8Q9HCE9 1232 aaPredicted RBP16.39■□□□□ 0.21
A1CF-204ENST00000373997 THRAP3Q9Y2W1 955 aaKnown RBP16.39■□□□□ 0.21
A1CF-204ENST00000373997 GNAI3P08754 354 aa16.38■□□□□ 0.21
A1CF-204ENST00000373997 GCC1Q96CN9 775 aa16.38■□□□□ 0.21
A1CF-204ENST00000373997 GNAI2P04899 355 aa16.37■□□□□ 0.21
A1CF-204ENST00000373997 DDB1Q16531 1140 aa16.37■□□□□ 0.21
A1CF-204ENST00000373997 BMP2KLQ5H9B9 411 aa16.37■□□□□ 0.21
A1CF-204ENST00000373997 CDCA7Q9BWT1 371 aaPredicted RBP16.37■□□□□ 0.21
A1CF-204ENST00000373997 BEND3Q5T5X7 828 aa16.37■□□□□ 0.21
A1CF-204ENST00000373997 KSR2Q6VAB6 950 aa16.37■□□□□ 0.21
A1CF-204ENST00000373997 UNC5CLQ8IV45 518 aa16.37■□□□□ 0.21
A1CF-204ENST00000373997 RPAP2Q8IXW5 612 aaPredicted RBP16.37■□□□□ 0.21
A1CF-204ENST00000373997 PIGBQ92521 554 aa16.37■□□□□ 0.21
A1CF-204ENST00000373997 LNPKQ9C0E8 428 aa16.37■□□□□ 0.21
A1CF-204ENST00000373997 NUP188Q5SRE5 1749 aa16.36■□□□□ 0.21
A1CF-204ENST00000373997 DDX58O95786 925 aaKnown RBP16.36■□□□□ 0.21
A1CF-204ENST00000373997 ANKRD45Q5TZF3 282 aa16.36■□□□□ 0.21
A1CF-204ENST00000373997 XAGE3Q8WTP9 111 aa16.36■□□□□ 0.21
A1CF-204ENST00000373997 SYTL4Q96C24 671 aaPredicted RBP16.36■□□□□ 0.21
A1CF-204ENST00000373997 USP44Q9H0E7 712 aa16.36■□□□□ 0.21
A1CF-204ENST00000373997 BCL9LQ86UU0 1499 aa16.36■□□□□ 0.21
A1CF-204ENST00000373997 A0A0G2JS52 829 aa16.36■□□□□ 0.21
A1CF-204ENST00000373997 UBTFL1P0CB47 393 aaPredicted RBP16.36■□□□□ 0.21
A1CF-204ENST00000373997 ASAP1Q9ULH1 1129 aa16.36■□□□□ 0.21
A1CF-204ENST00000373997 LRRFIP2Q9Y608 721 aaKnown RBP16.36■□□□□ 0.21
A1CF-204ENST00000373997 SPATA31A6Q5VVP1 1343 aa16.35■□□□□ 0.21
A1CF-204ENST00000373997 FSD2A1L4K1 749 aa16.35■□□□□ 0.21
A1CF-204ENST00000373997 HSPA1LP34931 641 aa16.35■□□□□ 0.21
A1CF-204ENST00000373997 BCL9O00512 1426 aa16.35■□□□□ 0.21
A1CF-204ENST00000373997 DDX11L8A8MPP1 907 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms