RNA–Protein interactions for RNA: ENST00000373382.5

VPS26A-202, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VPS26A, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-202ENST00000373382 KIF3AQ9Y496 699 aa21.32■■□□□ 1
VPS26A-202ENST00000373382 LARGE1O95461 756 aa21.31■■□□□ 1
VPS26A-202ENST00000373382 HSPA4P34932 840 aa21.31■■□□□ 1
VPS26A-202ENST00000373382 FAM173BQ6P4H8 233 aa21.31■■□□□ 1
VPS26A-202ENST00000373382 NECAB1Q8N987 351 aa21.31■■□□□ 1
VPS26A-202ENST00000373382 PHAXQ9H814 394 aaKnown RBP21.31■■□□□ 1
VPS26A-202ENST00000373382 DLG5Q8TDM6 1919 aa21.31■■□□□ 1
VPS26A-202ENST00000373382 DRC7Q8IY82 874 aa21.31■■□□□ 1
VPS26A-202ENST00000373382 KDM4AO75164 1064 aa21.31■■□□□ 1
VPS26A-202ENST00000373382 UBE2HP62256 183 aa21.31■■□□□ 1
VPS26A-202ENST00000373382 CCDC94Q9BW85 323 aaPredicted RBP21.31■■□□□ 1
VPS26A-202ENST00000373382 RUFY3Q7L099 469 aa21.3■■□□□ 1
VPS26A-202ENST00000373382 IGSF3O75054 1194 aa21.3■■□□□ 1
VPS26A-202ENST00000373382 GJB2P29033 226 aa21.3■■□□□ 1
VPS26A-202ENST00000373382 LIMCH1Q9UPQ0 1083 aa21.3■■□□□ 1
VPS26A-202ENST00000373382 F13A1P00488 732 aa21.29■■□□□ 1
VPS26A-202ENST00000373382 JAKMIP1Q96N16 626 aaKnown RBP21.29■■□□□ 1
VPS26A-202ENST00000373382 USP44Q9H0E7 712 aa21.29■■□□□ 1
VPS26A-202ENST00000373382 PYCARDQ9ULZ3 195 aa21.29■■□□□ 1
VPS26A-202ENST00000373382 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.29■■□□□ 1
VPS26A-202ENST00000373382 SALL3Q9BXA9 1300 aa21.29■■□□□ 1
VPS26A-202ENST00000373382 ANXA1P04083 346 aa21.29■■□□□ 1
VPS26A-202ENST00000373382 HMGN5P82970 282 aaKnown RBP21.29■■□□□ 1
VPS26A-202ENST00000373382 ZNF710Q8N1W2 664 aa21.29■■□□□ 1
VPS26A-202ENST00000373382 DIAPH3Q9NSV4 1193 aa21.29■■□□□ 1
VPS26A-202ENST00000373382 CHAF1AQ13111 956 aaPredicted RBP21.29■■□□□ 1
VPS26A-202ENST00000373382 UVSSAQ2YD98 709 aa21.29■■□□□ 1
VPS26A-202ENST00000373382 PRPF40BQ6NWY9 871 aaKnown RBP21.29■■□□□ 1
VPS26A-202ENST00000373382 TCEANC2Q96MN5 208 aa21.28■■□□□ 1
VPS26A-202ENST00000373382 RHPN1Q8TCX5 695 aa21.28■■□□□ 1
VPS26A-202ENST00000373382 RPAP1Q9BWH6 1393 aaPredicted RBP21.28■■□□□ 1
VPS26A-202ENST00000373382 CKAP2LQ8IYA6 745 aa21.27■■□□□ 1
VPS26A-202ENST00000373382 ESF1Q9H501 851 aaKnown RBP21.27■■□□□ 1
VPS26A-202ENST00000373382 AP5Z1O43299 807 aa21.27■■□□□ 1
VPS26A-202ENST00000373382 HDGFL1Q5TGJ6 251 aa21.27■■□□□ 1
VPS26A-202ENST00000373382 C14orf37Q86TY3 774 aa21.27■■□□□ 1
VPS26A-202ENST00000373382 CNTROBQ8N137 903 aa21.27■□□□□ 0.99
VPS26A-202ENST00000373382 PRIMPOLQ96LW4 560 aa21.27■□□□□ 0.99
VPS26A-202ENST00000373382 TCHHQ07283 1943 aa21.27■□□□□ 0.99
VPS26A-202ENST00000373382 EYA1Q99502 592 aa21.26■□□□□ 0.99
VPS26A-202ENST00000373382 ATP6V1DQ9Y5K8 247 aa21.26■□□□□ 0.99
VPS26A-202ENST00000373382 SGSM2O43147 1006 aa21.26■□□□□ 0.99
VPS26A-202ENST00000373382 BCL2L12Q9HB09 334 aa21.26■□□□□ 0.99
VPS26A-202ENST00000373382 ADCK5Q3MIX3 580 aa21.25■□□□□ 0.99
VPS26A-202ENST00000373382 SMAP1Q8IYB5 467 aaPredicted RBP21.25■□□□□ 0.99
VPS26A-202ENST00000373382 STAP2Q9UGK3 403 aa21.25■□□□□ 0.99
VPS26A-202ENST00000373382 CRB1P82279 1406 aa21.25■□□□□ 0.99
VPS26A-202ENST00000373382 GOLGA6L4A6NEF3 574 aa21.25■□□□□ 0.99
VPS26A-202ENST00000373382 USHBP1Q8N6Y0 703 aa21.25■□□□□ 0.99
VPS26A-202ENST00000373382 PDRG1Q9NUG6 133 aa21.25■□□□□ 0.99
VPS26A-202ENST00000373382 RAD50Q92878 1312 aa21.24■□□□□ 0.99
VPS26A-202ENST00000373382 TMEM131LA2VDJ0 1609 aa21.24■□□□□ 0.99
VPS26A-202ENST00000373382 NBPF7P0C2Y1 421 aaPredicted RBP21.24■□□□□ 0.99
VPS26A-202ENST00000373382 SOS1Q07889 1333 aaPredicted RBP21.24■□□□□ 0.99
VPS26A-202ENST00000373382 LETM1O95202 739 aaPredicted RBP21.24■□□□□ 0.99
VPS26A-202ENST00000373382 NGDNQ8NEJ9 315 aaKnown RBP21.24■□□□□ 0.99
VPS26A-202ENST00000373382 TFIP11Q9UBB9 837 aaKnown RBP21.24■□□□□ 0.99
VPS26A-202ENST00000373382 RIOK3O14730 519 aaKnown RBP21.23■□□□□ 0.99
VPS26A-202ENST00000373382 PTGS1P23219 599 aa21.23■□□□□ 0.99
VPS26A-202ENST00000373382 PTH1RQ03431 593 aa21.23■□□□□ 0.99
VPS26A-202ENST00000373382 ATP2B3Q16720 1220 aa21.23■□□□□ 0.99
VPS26A-202ENST00000373382 LUZP1Q86V48 1076 aa21.23■□□□□ 0.99
VPS26A-202ENST00000373382 PDCL2Q8N4E4 241 aa21.23■□□□□ 0.99
VPS26A-202ENST00000373382 STK3Q13188 491 aa21.22■□□□□ 0.99
VPS26A-202ENST00000373382 TAF7Q15545 349 aaPredicted RBP21.22■□□□□ 0.99
VPS26A-202ENST00000373382 LARP1BQ659C4 914 aaKnown RBP21.22■□□□□ 0.99
VPS26A-202ENST00000373382 LSG1Q9H089 658 aaKnown RBP21.22■□□□□ 0.99
VPS26A-202ENST00000373382 KCNF1Q9H3M0 494 aa21.21■□□□□ 0.99
VPS26A-202ENST00000373382 CCDC192P0DO97 292 aa21.21■□□□□ 0.99
VPS26A-202ENST00000373382 C16orf45Q96MC5 204 aaPredicted RBP21.21■□□□□ 0.99
VPS26A-202ENST00000373382 PI4K2BQ8TCG2 481 aa21.21■□□□□ 0.99
VPS26A-202ENST00000373382 DIP2CQ9Y2E4 1556 aa21.21■□□□□ 0.99
VPS26A-202ENST00000373382 GNAT3A8MTJ3 354 aa21.2■□□□□ 0.98
VPS26A-202ENST00000373382 U2AF2P26368 475 aaKnown RBP eCLIP21.2■□□□□ 0.98
VPS26A-202ENST00000373382 TTC14Q96N46 770 aa21.2■□□□□ 0.98
VPS26A-202ENST00000373382 ZNF592Q92610 1267 aa21.2■□□□□ 0.98
VPS26A-202ENST00000373382 KIF1BPQ96EK5 621 aa21.2■□□□□ 0.98
VPS26A-202ENST00000373382 SLC26A8Q96RN1 970 aa21.2■□□□□ 0.98
VPS26A-202ENST00000373382 MTMR6Q9Y217 621 aa21.2■□□□□ 0.98
VPS26A-202ENST00000373382 CLTCQ00610 1675 aaKnown RBP21.2■□□□□ 0.98
VPS26A-202ENST00000373382 LRMPQ12912 555 aa21.19■□□□□ 0.98
VPS26A-202ENST00000373382 CYP46A1Q9Y6A2 500 aa21.19■□□□□ 0.98
VPS26A-202ENST00000373382 GOLGA6L6A8MZA4 724 aa21.19■□□□□ 0.98
VPS26A-202ENST00000373382 OSCARQ8IYS5 282 aa21.19■□□□□ 0.98
VPS26A-202ENST00000373382 PA2G4Q9UQ80 394 aaKnown RBP21.19■□□□□ 0.98
VPS26A-202ENST00000373382 PI4KAP2A4QPH2 592 aa21.18■□□□□ 0.98
VPS26A-202ENST00000373382 LIG1P18858 919 aa21.18■□□□□ 0.98
VPS26A-202ENST00000373382 NLRP6P59044 892 aa21.18■□□□□ 0.98
VPS26A-202ENST00000373382 CCDC186Q7Z3E2 898 aa21.18■□□□□ 0.98
VPS26A-202ENST00000373382 PI4KAP1Q8N8J0 262 aa21.18■□□□□ 0.98
VPS26A-202ENST00000373382 TRIM5Q9C035 493 aa21.18■□□□□ 0.98
VPS26A-202ENST00000373382 HYPKQ9NX55 129 aa21.18■□□□□ 0.98
VPS26A-202ENST00000373382 KIAA1524Q8TCG1 905 aa21.18■□□□□ 0.98
VPS26A-202ENST00000373382 SSH3Q8TE77 659 aa21.18■□□□□ 0.98
VPS26A-202ENST00000373382 PODXL2Q9NZ53 605 aa21.18■□□□□ 0.98
VPS26A-202ENST00000373382 FOSBP53539 338 aa21.17■□□□□ 0.98
VPS26A-202ENST00000373382 TMEM87AQ8NBN3 555 aa21.17■□□□□ 0.98
VPS26A-202ENST00000373382 IL17REQ8NFR9 667 aa21.17■□□□□ 0.98
VPS26A-202ENST00000373382 ME3Q16798 604 aa21.17■□□□□ 0.98
VPS26A-202ENST00000373382 SSH2Q76I76 1423 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms