RNA–Protein interactions for RNA: ENST00000373017.5

LCN2-203, Transcript of lipocalin 2, humanhuman

APPRIS P2 TSL 5 BASIC

Gene LCN2, Length 848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-203ENST00000373017 MCM10Q7L590 875 aa22.11■■□□□ 1.13
LCN2-203ENST00000373017 TTC5Q8N0Z6 440 aa22.11■■□□□ 1.13
LCN2-203ENST00000373017 NRXN2Q9P2S2 1712 aa22.11■■□□□ 1.13
LCN2-203ENST00000373017 DDX10Q13206 875 aaKnown RBP22.1■■□□□ 1.13
LCN2-203ENST00000373017 DCTN1Q14203 1278 aa22.1■■□□□ 1.13
LCN2-203ENST00000373017 SCN7AQ01118 1682 aa22.1■■□□□ 1.13
LCN2-203ENST00000373017 USPL1Q5W0Q7 1092 aa22.09■■□□□ 1.13
LCN2-203ENST00000373017 KDM3BQ7LBC6 1761 aa22.08■■□□□ 1.13
LCN2-203ENST00000373017 GRIN3BO60391 1043 aa22.08■■□□□ 1.13
LCN2-203ENST00000373017 BTBD11A6QL63 1104 aa22.07■■□□□ 1.12
LCN2-203ENST00000373017 PLEKHF1Q96S99 279 aa22.07■■□□□ 1.12
LCN2-203ENST00000373017 BCL2L12Q9HB09 334 aa22.07■■□□□ 1.12
LCN2-203ENST00000373017 PARP3Q9Y6F1 533 aa22.07■■□□□ 1.12
LCN2-203ENST00000373017 ARFGEF1Q9Y6D6 1849 aa22.07■■□□□ 1.12
LCN2-203ENST00000373017 BCORQ6W2J9 1755 aa22.07■■□□□ 1.12
LCN2-203ENST00000373017 CANXP27824 592 aaKnown RBP22.06■■□□□ 1.12
LCN2-203ENST00000373017 TM4SF1P30408 202 aa22.06■■□□□ 1.12
LCN2-203ENST00000373017 NARFQ9UHQ1 456 aa22.06■■□□□ 1.12
LCN2-203ENST00000373017 A0A0G2JLW4 131 aa22.05■■□□□ 1.12
LCN2-203ENST00000373017 POLRMTO00411 1230 aaKnown RBP22.05■■□□□ 1.12
LCN2-203ENST00000373017 EIF5P55010 431 aaKnown RBP22.05■■□□□ 1.12
LCN2-203ENST00000373017 FMNL2Q96PY5 1086 aa22.05■■□□□ 1.12
LCN2-203ENST00000373017 LAMB4A4D0S4 1761 aa22.04■■□□□ 1.12
LCN2-203ENST00000373017 PRAMEF22A3QJZ6 481 aa22.04■■□□□ 1.12
LCN2-203ENST00000373017 ZPR1O75312 459 aa22.04■■□□□ 1.12
LCN2-203ENST00000373017 STARD3NLO95772 234 aa22.03■■□□□ 1.12
LCN2-203ENST00000373017 DPEP1P16444 411 aa22.03■■□□□ 1.12
LCN2-203ENST00000373017 TGFB2P61812 414 aa22.03■■□□□ 1.12
LCN2-203ENST00000373017 RALBP1Q15311 655 aa22.03■■□□□ 1.12
LCN2-203ENST00000373017 RTF1Q92541 710 aaKnown RBP22.03■■□□□ 1.12
LCN2-203ENST00000373017 ANKRD31Q8N7Z5 1873 aa22.03■■□□□ 1.12
LCN2-203ENST00000373017 DLEC1Q9Y238 1755 aa22.02■■□□□ 1.12
LCN2-203ENST00000373017 HTATSF1O43719 755 aaKnown RBP22.02■■□□□ 1.12
LCN2-203ENST00000373017 KCNA3P22001 575 aa22.02■■□□□ 1.12
LCN2-203ENST00000373017 NFIXQ14938 502 aa22.02■■□□□ 1.12
LCN2-203ENST00000373017 A1BGP04217 495 aa22.01■■□□□ 1.11
LCN2-203ENST00000373017 USP16Q9Y5T5 823 aa22.01■■□□□ 1.11
LCN2-203ENST00000373017 TEX13AQ9BXU3 409 aaPredicted RBP22■■□□□ 1.11
LCN2-203ENST00000373017 ADCY9O60503 1353 aa21.99■■□□□ 1.11
LCN2-203ENST00000373017 MIS18AQ9NYP9 233 aa21.99■■□□□ 1.11
LCN2-203ENST00000373017 PIP4K2AP48426 406 aaPredicted RBP21.98■■□□□ 1.11
LCN2-203ENST00000373017 NFE2L2Q16236 605 aa21.98■■□□□ 1.11
LCN2-203ENST00000373017 THUMPD2Q9BTF0 503 aaKnown RBP21.98■■□□□ 1.11
LCN2-203ENST00000373017 IL6STP40189 918 aaPredicted RBP21.97■■□□□ 1.11
LCN2-203ENST00000373017 TBC1D2BQ9UPU7 963 aa21.97■■□□□ 1.11
LCN2-203ENST00000373017 BCS1LQ9Y276 419 aa21.97■■□□□ 1.11
LCN2-203ENST00000373017 MYBBP1AQ9BQG0 1328 aaKnown RBP21.97■■□□□ 1.11
LCN2-203ENST00000373017 CARMIL3Q8ND23 1372 aa21.97■■□□□ 1.11
LCN2-203ENST00000373017 ATP10DQ9P241 1426 aa21.97■■□□□ 1.11
LCN2-203ENST00000373017 CHRNA5P30532 468 aa21.96■■□□□ 1.11
LCN2-203ENST00000373017 TAF7Q15545 349 aaPredicted RBP21.96■■□□□ 1.11
LCN2-203ENST00000373017 ZNF330Q9Y3S2 320 aaPredicted RBP21.96■■□□□ 1.11
LCN2-203ENST00000373017 COL11A2P13942 1736 aaPredicted RBP21.96■■□□□ 1.11
LCN2-203ENST00000373017 SBF1O95248 1867 aa21.95■■□□□ 1.1
LCN2-203ENST00000373017 A0A087WZG4 1122 aa21.94■■□□□ 1.1
LCN2-203ENST00000373017 SERPINB2P05120 415 aa21.94■■□□□ 1.1
LCN2-203ENST00000373017 SNRPA1P09661 255 aaKnown RBP21.94■■□□□ 1.1
LCN2-203ENST00000373017 TBC1D9BQ66K14 1250 aa21.94■■□□□ 1.1
LCN2-203ENST00000373017 CAMTA2O94983 1202 aa21.93■■□□□ 1.1
LCN2-203ENST00000373017 NEFMP07197 916 aa21.93■■□□□ 1.1
LCN2-203ENST00000373017 BICDL1Q6ZP65 573 aa21.93■■□□□ 1.1
LCN2-203ENST00000373017 MAPK8IP3Q9UPT6 1336 aa21.93■■□□□ 1.1
LCN2-203ENST00000373017 NBPF26B4DH59 902 aa21.92■■□□□ 1.1
LCN2-203ENST00000373017 NBPF10Q6P3W6 841 aaKnown RBP21.92■■□□□ 1.1
LCN2-203ENST00000373017 NBPF15Q8N660 670 aa21.92■■□□□ 1.1
LCN2-203ENST00000373017 CACNA1SQ13698 1873 aa21.92■■□□□ 1.1
LCN2-203ENST00000373017 NUP98P52948 1817 aa21.9■■□□□ 1.1
LCN2-203ENST00000373017 PIM2Q9P1W9 311 aa21.9■■□□□ 1.1
LCN2-203ENST00000373017 DZIP3Q86Y13 1208 aaKnown RBP21.89■■□□□ 1.09
LCN2-203ENST00000373017 PNNQ9H307 717 aaKnown RBP21.89■■□□□ 1.09
LCN2-203ENST00000373017 CCDC88AQ3V6T2 1871 aa21.89■■□□□ 1.09
LCN2-203ENST00000373017 EIF4A1P60842 406 aaKnown RBP21.88■■□□□ 1.09
LCN2-203ENST00000373017 CCDC146Q8IYE0 955 aa21.88■■□□□ 1.09
LCN2-203ENST00000373017 PRKRIP1Q9H875 184 aaPredicted RBP21.88■■□□□ 1.09
LCN2-203ENST00000373017 GIGYF1O75420 1035 aaPredicted RBP21.87■■□□□ 1.09
LCN2-203ENST00000373017 TMPOP42166 694 aaKnown RBP21.87■■□□□ 1.09
LCN2-203ENST00000373017 RIPK4P57078 832 aa21.87■■□□□ 1.09
LCN2-203ENST00000373017 DALRD3Q5D0E6 543 aaKnown RBP21.87■■□□□ 1.09
LCN2-203ENST00000373017 ARHGAP27Q6ZUM4 889 aa21.87■■□□□ 1.09
LCN2-203ENST00000373017 CCDC24Q8N4L8 307 aa21.87■■□□□ 1.09
LCN2-203ENST00000373017 PRR5LQ6MZQ0 368 aa21.86■■□□□ 1.09
LCN2-203ENST00000373017 PNISRQ8TF01 805 aaKnown RBP21.86■■□□□ 1.09
LCN2-203ENST00000373017 RRP7AQ9Y3A4 280 aaKnown RBP21.86■■□□□ 1.09
LCN2-203ENST00000373017 ZNF526Q8TF50 670 aaPredicted RBP21.85■■□□□ 1.09
LCN2-203ENST00000373017 ARFGEF2Q9Y6D5 1785 aa21.84■■□□□ 1.09
LCN2-203ENST00000373017 C1QTNF8P60827 252 aa21.84■■□□□ 1.09
LCN2-203ENST00000373017 NPM2Q86SE8 214 aaKnown RBP21.83■■□□□ 1.09
LCN2-203ENST00000373017 C2CD5Q86YS7 1000 aa21.83■■□□□ 1.09
LCN2-203ENST00000373017 ADAMTS8Q9UP79 889 aa21.83■■□□□ 1.09
LCN2-203ENST00000373017 SLX4Q8IY92 1834 aa21.83■■□□□ 1.08
LCN2-203ENST00000373017 SETDB2Q96T68 719 aa21.82■■□□□ 1.08
LCN2-203ENST00000373017 FER1L6Q2WGJ9 1857 aa21.81■■□□□ 1.08
LCN2-203ENST00000373017 GPBP1L1Q9HC44 474 aaPredicted RBP21.81■■□□□ 1.08
LCN2-203ENST00000373017 NEUROD2Q15784 382 aa21.8■■□□□ 1.08
LCN2-203ENST00000373017 HLFQ16534 295 aa21.8■■□□□ 1.08
LCN2-203ENST00000373017 CLEC4GQ6UXB4 293 aa21.8■■□□□ 1.08
LCN2-203ENST00000373017 TSPYL4Q9UJ04 414 aa21.8■■□□□ 1.08
LCN2-203ENST00000373017 TRIM35Q9UPQ4 493 aa21.8■■□□□ 1.08
LCN2-203ENST00000373017 TNRC6CQ9HCJ0 1690 aaKnown RBP21.79■■□□□ 1.08
LCN2-203ENST00000373017 WDR43Q15061 677 aaKnown RBP eCLIP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms