RNA–Protein interactions for RNA: ENST00000370328.3

GABRE-201, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRE, Length 3,152 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-201ENST00000370328 USP16Q9Y5T5 823 aa10.04□□□□□ -0.8
GABRE-201ENST00000370328 TNS2Q63HR2 1409 aa10.04□□□□□ -0.8
GABRE-201ENST00000370328 GNPATO15228 680 aa10.04□□□□□ -0.8
GABRE-201ENST00000370328 A1BGP04217 495 aa10.04□□□□□ -0.8
GABRE-201ENST00000370328 COL18A1P39060 1754 aa10.04□□□□□ -0.8
GABRE-201ENST00000370328 ZNF790Q6PG37 636 aa10.04□□□□□ -0.8
GABRE-201ENST00000370328 BICDL1Q6ZP65 573 aa10.04□□□□□ -0.8
GABRE-201ENST00000370328 PALLDQ8WX93 1383 aa10.04□□□□□ -0.8
GABRE-201ENST00000370328 TMED8Q6PL24 325 aaPredicted RBP10.03□□□□□ -0.8
GABRE-201ENST00000370328 SLC4A9Q96Q91 983 aa10.03□□□□□ -0.8
GABRE-201ENST00000370328 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.03□□□□□ -0.89e-9■□□□□ 10.9
GABRE-201ENST00000370328 DISP2A7MBM2 1401 aa10.03□□□□□ -0.8
GABRE-201ENST00000370328 TAF7Q15545 349 aaPredicted RBP10.03□□□□□ -0.8
GABRE-201ENST00000370328 AMIGO3Q86WK7 504 aa10.03□□□□□ -0.8
GABRE-201ENST00000370328 COL3A1P02461 1466 aaPredicted RBP10.02□□□□□ -0.8
GABRE-201ENST00000370328 CRYBG1Q9Y4K1 1723 aa10.02□□□□□ -0.8
GABRE-201ENST00000370328 ITPK1Q13572 414 aa10.02□□□□□ -0.8
GABRE-201ENST00000370328 CCDC24Q8N4L8 307 aa10.02□□□□□ -0.8
GABRE-201ENST00000370328 TEX2Q8IWB9 1127 aa10.02□□□□□ -0.81
GABRE-201ENST00000370328 TBC1D2BQ9UPU7 963 aa10.02□□□□□ -0.81
GABRE-201ENST00000370328 KDM6AO15550 1401 aaPredicted RBP10.02□□□□□ -0.81
GABRE-201ENST00000370328 CCER2I3L3R5 266 aa10.02□□□□□ -0.81
GABRE-201ENST00000370328 TSPYL6Q8N831 410 aa10.01□□□□□ -0.81
GABRE-201ENST00000370328 AK7Q96M32 723 aa10.01□□□□□ -0.81
GABRE-201ENST00000370328 PCNTO95613 3336 aa10.01□□□□□ -0.81
GABRE-201ENST00000370328 MBIPQ9NS73 344 aa10.01□□□□□ -0.81
GABRE-201ENST00000370328 ERVV-2B6SEH9 535 aa10□□□□□ -0.81
GABRE-201ENST00000370328 ZNF827Q17R98 1081 aa10□□□□□ -0.81
GABRE-201ENST00000370328 ZNF592Q92610 1267 aa10□□□□□ -0.81
GABRE-201ENST00000370328 CAMKK2Q96RR4 588 aa10□□□□□ -0.81
GABRE-201ENST00000370328 ZBTB1Q9Y2K1 713 aa10□□□□□ -0.81
GABRE-201ENST00000370328 NPHP1O15259 732 aa10□□□□□ -0.81
GABRE-201ENST00000370328 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.99□□□□□ -0.81
GABRE-201ENST00000370328 VGLL3A8MV65 326 aa9.99□□□□□ -0.81
GABRE-201ENST00000370328 C8orf58Q8NAV2 365 aa9.99□□□□□ -0.81
GABRE-201ENST00000370328 LINC00116Q8NCU8 138 aa9.99□□□□□ -0.81
GABRE-201ENST00000370328 EXOSC9Q06265 439 aaKnown RBP9.99□□□□□ -0.81
GABRE-201ENST00000370328 LMOD3Q0VAK6 560 aa9.99□□□□□ -0.81
GABRE-201ENST00000370328 PATL2C9JE40 543 aaKnown RBP9.98□□□□□ -0.81
GABRE-201ENST00000370328 NKX1-1Q15270 411 aaPredicted RBP9.98□□□□□ -0.81
GABRE-201ENST00000370328 NBPF14Q5TI25 921 aa9.98□□□□□ -0.81
GABRE-201ENST00000370328 FMNL2Q96PY5 1086 aa9.98□□□□□ -0.81
GABRE-201ENST00000370328 SRP68Q9UHB9 627 aaKnown RBP9.98□□□□□ -0.81
GABRE-201ENST00000370328 NRAPQ86VF7 1730 aa9.98□□□□□ -0.81
GABRE-201ENST00000370328 ZBTB3Q9H5J0 574 aa9.98□□□□□ -0.81
GABRE-201ENST00000370328 STK32BQ9NY57 414 aa9.98□□□□□ -0.81
GABRE-201ENST00000370328 CRKLP46109 303 aaKnown RBP9.98□□□□□ -0.81
GABRE-201ENST00000370328 BRWD3Q6RI45 1802 aa9.97□□□□□ -0.81
GABRE-201ENST00000370328 NWD2Q9ULI1 1742 aa9.97□□□□□ -0.81
GABRE-201ENST00000370328 PROSER3Q2NL68 480 aa9.97□□□□□ -0.81
GABRE-201ENST00000370328 HDGFL1Q5TGJ6 251 aa9.97□□□□□ -0.81
GABRE-201ENST00000370328 GOLGA2Q08379 1002 aa9.97□□□□□ -0.81
GABRE-201ENST00000370328 DUSP27Q5VZP5 1158 aa9.97□□□□□ -0.81
GABRE-201ENST00000370328 SMARCC1Q92922 1105 aaPredicted RBP9.97□□□□□ -0.81
GABRE-201ENST00000370328 JARID2Q92833 1246 aaPredicted RBP9.96□□□□□ -0.81
GABRE-201ENST00000370328 FRAT1Q92837 279 aaPredicted RBP9.96□□□□□ -0.81
GABRE-201ENST00000370328 BCL9O00512 1426 aa9.96□□□□□ -0.82
GABRE-201ENST00000370328 GPTP24298 496 aa9.96□□□□□ -0.82
GABRE-201ENST00000370328 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.96□□□□□ -0.82
GABRE-201ENST00000370328 STARD3NLO95772 234 aa9.96□□□□□ -0.82
GABRE-201ENST00000370328 RFC4P35249 363 aa9.96□□□□□ -0.82
GABRE-201ENST00000370328 MAPK8IP2Q13387 824 aaPredicted RBP9.96□□□□□ -0.82
GABRE-201ENST00000370328 ZNF526Q8TF50 670 aaPredicted RBP9.96□□□□□ -0.82
GABRE-201ENST00000370328 RTCBQ9Y3I0 505 aaKnown RBP9.96□□□□□ -0.82
GABRE-201ENST00000370328 PLSCR1O15162 318 aa9.95□□□□□ -0.82
GABRE-201ENST00000370328 EIF4A1P60842 406 aaKnown RBP9.95□□□□□ -0.82
GABRE-201ENST00000370328 SLC15A2Q16348 729 aa9.95□□□□□ -0.82
GABRE-201ENST00000370328 CHPF2Q9P2E5 772 aa9.95□□□□□ -0.82
GABRE-201ENST00000370328 ANKRD26Q9UPS8 1709 aa9.95□□□□□ -0.82
GABRE-201ENST00000370328 SNRPA1P09661 255 aaKnown RBP9.95□□□□□ -0.82
GABRE-201ENST00000370328 GNAI1P63096 354 aa9.95□□□□□ -0.82
GABRE-201ENST00000370328 CLUAP1Q96AJ1 413 aa9.95□□□□□ -0.82
GABRE-201ENST00000370328 GIGYF1O75420 1035 aaPredicted RBP9.94□□□□□ -0.82
GABRE-201ENST00000370328 TWISTNBQ3B726 338 aaPredicted RBP9.94□□□□□ -0.82
GABRE-201ENST00000370328 NOP58Q9Y2X3 529 aaKnown RBP9.94□□□□□ -0.82
GABRE-201ENST00000370328 SLC4A10Q6U841 1118 aa9.94□□□□□ -0.82
GABRE-201ENST00000370328 FAM43BQ6ZT52 329 aaPredicted RBP9.94□□□□□ -0.82
GABRE-201ENST00000370328 CCDC125Q86Z20 511 aa9.94□□□□□ -0.82
GABRE-201ENST00000370328 PHAXQ9H814 394 aaKnown RBP9.94□□□□□ -0.82
GABRE-201ENST00000370328 TRAPPC3LQ5T215 181 aa9.93□□□□□ -0.82
GABRE-201ENST00000370328 COL23A1Q86Y22 540 aaPredicted RBP9.93□□□□□ -0.82
GABRE-201ENST00000370328 ZNF830Q96NB3 372 aaPredicted RBP9.93□□□□□ -0.82
GABRE-201ENST00000370328 LRRC37A3O60309 1634 aa9.93□□□□□ -0.82
GABRE-201ENST00000370328 FAM208AQ9UK61 1670 aaKnown RBP9.93□□□□□ -0.82
GABRE-201ENST00000370328 CHL1O00533 1208 aa9.93□□□□□ -0.82
GABRE-201ENST00000370328 RRP9O43818 475 aaKnown RBP9.93□□□□□ -0.82
GABRE-201ENST00000370328 SLC4A2P04920 1241 aa9.93□□□□□ -0.82
GABRE-201ENST00000370328 USPL1Q5W0Q7 1092 aa9.93□□□□□ -0.82
GABRE-201ENST00000370328 TTLL7Q6ZT98 887 aa9.93□□□□□ -0.82
GABRE-201ENST00000370328 ARHGEF1Q92888 912 aaKnown RBP9.93□□□□□ -0.82
GABRE-201ENST00000370328 ATP5J2-PTCD1G3V325 749 aa9.93□□□□□ -0.82
GABRE-201ENST00000370328 ZPR1O75312 459 aa9.92□□□□□ -0.82
GABRE-201ENST00000370328 COPS6Q7L5N1 327 aa9.92□□□□□ -0.82
GABRE-201ENST00000370328 CCDC85AQ96PX6 553 aaPredicted RBP9.92□□□□□ -0.82
GABRE-201ENST00000370328 PRDM4Q9UKN5 801 aa9.92□□□□□ -0.82
GABRE-201ENST00000370328 NBPF26B4DH59 902 aa9.92□□□□□ -0.82
GABRE-201ENST00000370328 F6X3S4 739 aa9.92□□□□□ -0.82
GABRE-201ENST00000370328 CYP19A1P11511 503 aaPredicted RBP9.92□□□□□ -0.82
GABRE-201ENST00000370328 NBPF10Q6P3W6 841 aaKnown RBP9.92□□□□□ -0.82
GABRE-201ENST00000370328 NBPF15Q8N660 670 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms