RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 GRIP2Q9C0E4 1043 aa7.92□□□□□ -1.14
ECHDC1-204ENST00000368292 KIAA1024Q9UPX6 916 aa7.92□□□□□ -1.14
ECHDC1-204ENST00000368292 BCORL1Q5H9F3 1711 aa7.92□□□□□ -1.14
ECHDC1-204ENST00000368292 WASLO00401 505 aaPredicted RBP7.91□□□□□ -1.14
ECHDC1-204ENST00000368292 DKK1O94907 266 aa7.91□□□□□ -1.14
ECHDC1-204ENST00000368292 INHAP05111 366 aa7.91□□□□□ -1.14
ECHDC1-204ENST00000368292 GPC1P35052 558 aa7.91□□□□□ -1.14
ECHDC1-204ENST00000368292 GDF10P55107 478 aa7.91□□□□□ -1.14
ECHDC1-204ENST00000368292 CENPCQ03188 943 aa7.91□□□□□ -1.14
ECHDC1-204ENST00000368292 NLRP3Q96P20 1036 aa7.91□□□□□ -1.14
ECHDC1-204ENST00000368292 FHDC1Q9C0D6 1143 aaPredicted RBP7.91□□□□□ -1.14
ECHDC1-204ENST00000368292 MED1Q15648 1581 aaPredicted RBP7.9□□□□□ -1.14
ECHDC1-204ENST00000368292 SRPK2P78362 688 aaKnown RBP7.9□□□□□ -1.14
ECHDC1-204ENST00000368292 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.9□□□□□ -1.147e-7■□□□□ 8.4
ECHDC1-204ENST00000368292 ESCO1Q5FWF5 840 aa7.9□□□□□ -1.14
ECHDC1-204ENST00000368292 TRIM50Q86XT4 487 aa7.9□□□□□ -1.14
ECHDC1-204ENST00000368292 OGFOD1Q8N543 542 aa7.9□□□□□ -1.14
ECHDC1-204ENST00000368292 KIAA0586Q9BVV6 1533 aa7.89□□□□□ -1.15
ECHDC1-204ENST00000368292 RIMS1Q86UR5 1692 aaKnown RBP7.89□□□□□ -1.15
ECHDC1-204ENST00000368292 RFX1P22670 979 aa7.88□□□□□ -1.15
ECHDC1-204ENST00000368292 ATP1A2P50993 1020 aa7.88□□□□□ -1.15
ECHDC1-204ENST00000368292 LYSMD3Q7Z3D4 306 aa7.88□□□□□ -1.15
ECHDC1-204ENST00000368292 PRICKLE2Q7Z3G6 844 aa7.88□□□□□ -1.15
ECHDC1-204ENST00000368292 LARGE2Q8N3Y3 721 aa7.88□□□□□ -1.15
ECHDC1-204ENST00000368292 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.88□□□□□ -1.15
ECHDC1-204ENST00000368292 ZNF775Q96BV0 537 aaPredicted RBP7.88□□□□□ -1.15
ECHDC1-204ENST00000368292 SLC4A9Q96Q91 983 aa7.88□□□□□ -1.15
ECHDC1-204ENST00000368292 DNAAF2Q9NVR5 837 aaKnown RBP7.88□□□□□ -1.15
ECHDC1-204ENST00000368292 STRCQ7RTU9 1775 aa7.88□□□□□ -1.15
ECHDC1-204ENST00000368292 SENP3-EIF4A1A0A087X0R7 540 aa7.87□□□□□ -1.15
ECHDC1-204ENST00000368292 PDIA4P13667 645 aaKnown RBP7.87□□□□□ -1.15
ECHDC1-204ENST00000368292 PTSQ03393 145 aa7.87□□□□□ -1.15
ECHDC1-204ENST00000368292 CRTC2Q53ET0 693 aaPredicted RBP7.87□□□□□ -1.15
ECHDC1-204ENST00000368292 CCDC102BQ68D86 513 aa7.87□□□□□ -1.15
ECHDC1-204ENST00000368292 SIX5Q8N196 739 aa7.87□□□□□ -1.15
ECHDC1-204ENST00000368292 VRTNQ9H8Y1 702 aa7.87□□□□□ -1.15
ECHDC1-204ENST00000368292 ZNF358Q9NW07 568 aa7.87□□□□□ -1.15
ECHDC1-204ENST00000368292 SERTAD1Q9UHV2 236 aa7.87□□□□□ -1.15
ECHDC1-204ENST00000368292 SPATA31C2B4DYI2 1134 aa7.86□□□□□ -1.15
ECHDC1-204ENST00000368292 RASA1P20936 1047 aa7.86□□□□□ -1.15
ECHDC1-204ENST00000368292 SMTNP53814 917 aa7.86□□□□□ -1.15
ECHDC1-204ENST00000368292 PSME1Q06323 249 aa7.86□□□□□ -1.15
ECHDC1-204ENST00000368292 POU4F2Q12837 409 aa7.86□□□□□ -1.15
ECHDC1-204ENST00000368292 PTK7Q13308 1070 aa7.86□□□□□ -1.15
ECHDC1-204ENST00000368292 MTFR1Q15390 333 aa7.86□□□□□ -1.15
ECHDC1-204ENST00000368292 CDCA8Q53HL2 280 aa7.86□□□□□ -1.15
ECHDC1-204ENST00000368292 SLC27A3Q5K4L6 730 aa7.86□□□□□ -1.15
ECHDC1-204ENST00000368292 TPCN2Q8NHX9 752 aa7.86□□□□□ -1.15
ECHDC1-204ENST00000368292 ZNF594Q96JF6 807 aaPredicted RBP7.86□□□□□ -1.15
ECHDC1-204ENST00000368292 LTBP4Q8N2S1 1624 aa7.85□□□□□ -1.15
ECHDC1-204ENST00000368292 SLC35F4A4IF30 521 aa7.85□□□□□ -1.15
ECHDC1-204ENST00000368292 RHOQP17081 205 aa7.85□□□□□ -1.15
ECHDC1-204ENST00000368292 TLR1Q15399 786 aa7.85□□□□□ -1.15
ECHDC1-204ENST00000368292 ZSCAN10Q96SZ4 725 aaPredicted RBP7.85□□□□□ -1.15
ECHDC1-204ENST00000368292 NXF1Q9UBU9 619 aaKnown RBP7.85□□□□□ -1.15
ECHDC1-204ENST00000368292 ERICH3Q5RHP9 1530 aa7.84□□□□□ -1.15
ECHDC1-204ENST00000368292 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.84□□□□□ -1.15
ECHDC1-204ENST00000368292 FAM196BA6NMK8 535 aa7.84□□□□□ -1.15
ECHDC1-204ENST00000368292 EPHA4P54764 986 aa7.84□□□□□ -1.15
ECHDC1-204ENST00000368292 NBPF10Q6P3W6 841 aaKnown RBP7.84□□□□□ -1.15
ECHDC1-204ENST00000368292 PPARGC1BQ86YN6 1023 aaKnown RBP7.84□□□□□ -1.15
ECHDC1-204ENST00000368292 ZNF295-AS1Q8N0V1 137 aa7.84□□□□□ -1.15
ECHDC1-204ENST00000368292 NBPF15Q8N660 670 aa7.84□□□□□ -1.15
ECHDC1-204ENST00000368292 IQSEC3Q9UPP2 1182 aaPredicted RBP7.84□□□□□ -1.15
ECHDC1-204ENST00000368292 USP3Q9Y6I4 520 aa7.84□□□□□ -1.15
ECHDC1-204ENST00000368292 A6NJY4 79 aa7.83□□□□□ -1.16
ECHDC1-204ENST00000368292 SFI1A8K8P3 1242 aa7.83□□□□□ -1.16
ECHDC1-204ENST00000368292 USP17L15C9J2P7 530 aa7.83□□□□□ -1.16
ECHDC1-204ENST00000368292 USP17L10C9JJH3 530 aa7.83□□□□□ -1.16
ECHDC1-204ENST00000368292 USP17L13C9JLJ4 530 aa7.83□□□□□ -1.16
ECHDC1-204ENST00000368292 USP17L12C9JPN9 530 aa7.83□□□□□ -1.16
ECHDC1-204ENST00000368292 USP17L11C9JVI0 530 aa7.83□□□□□ -1.16
ECHDC1-204ENST00000368292 USP17L21D6R901 530 aa7.83□□□□□ -1.16
ECHDC1-204ENST00000368292 USP17L18D6R9N7 530 aa7.83□□□□□ -1.16
ECHDC1-204ENST00000368292 USP17L22D6RA61 530 aa7.83□□□□□ -1.16
ECHDC1-204ENST00000368292 USP17L17D6RBQ6 530 aa7.83□□□□□ -1.16
ECHDC1-204ENST00000368292 USP17L19D6RCP7 530 aa7.83□□□□□ -1.16
ECHDC1-204ENST00000368292 USP17L20D6RJB6 530 aa7.83□□□□□ -1.16
ECHDC1-204ENST00000368292 TERTO14746 1132 aaKnown RBP7.83□□□□□ -1.16
ECHDC1-204ENST00000368292 BACH1O14867 736 aa7.83□□□□□ -1.16
ECHDC1-204ENST00000368292 PPFIA3O75145 1194 aa7.83□□□□□ -1.16
ECHDC1-204ENST00000368292 VEGFBP49765 207 aa7.83□□□□□ -1.16
ECHDC1-204ENST00000368292 USP17L24Q0WX57 530 aa7.83□□□□□ -1.16
ECHDC1-204ENST00000368292 NFX1Q12986 1120 aaKnown RBP7.83□□□□□ -1.16
ECHDC1-204ENST00000368292 WDR44Q5JSH3 913 aa7.83□□□□□ -1.16
ECHDC1-204ENST00000368292 LARP1Q6PKG0 1096 aaKnown RBP7.83□□□□□ -1.16
ECHDC1-204ENST00000368292 TRAIPQ9BWF2 469 aa7.83□□□□□ -1.16
ECHDC1-204ENST00000368292 MAGI3Q5TCQ9 1506 aa7.83□□□□□ -1.16
ECHDC1-204ENST00000368292 UHRF1BP1LA0JNW5 1464 aa7.82□□□□□ -1.16
ECHDC1-204ENST00000368292 M0R2N6 131 aa7.82□□□□□ -1.16
ECHDC1-204ENST00000368292 CDK2AP1O14519 115 aa7.82□□□□□ -1.16
ECHDC1-204ENST00000368292 PPP1R15AO75807 674 aaPredicted RBP7.82□□□□□ -1.16
ECHDC1-204ENST00000368292 PTPRGP23470 1445 aa7.82□□□□□ -1.16
ECHDC1-204ENST00000368292 FOXK2Q01167 660 aa7.82□□□□□ -1.16
ECHDC1-204ENST00000368292 DPYDQ12882 1025 aa7.82□□□□□ -1.16
ECHDC1-204ENST00000368292 C4orf17Q53FE4 359 aa7.82□□□□□ -1.16
ECHDC1-204ENST00000368292 LCE2CQ5TA81 110 aa7.82□□□□□ -1.16
ECHDC1-204ENST00000368292 ANKMY2Q8IV38 441 aa7.82□□□□□ -1.16
ECHDC1-204ENST00000368292 NPAS3Q8IXF0 933 aa7.82□□□□□ -1.16
ECHDC1-204ENST00000368292 TNS4Q8IZW8 715 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms