RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 IFNL2Q8IZJ0 200 aa15.11■□□□□ 0.01
PTPRK-207ENST00000368226 PI4KAP1Q8N8J0 262 aa15.11■□□□□ 0.01
PTPRK-207ENST00000368226 NKTRP30414 1462 aaKnown RBP15.11■□□□□ 0.01
PTPRK-207ENST00000368226 CUL7Q14999 1698 aa15.11■□□□□ 0.01
PTPRK-207ENST00000368226 LAMC3Q9Y6N6 1575 aa15.11■□□□□ 0.01
PTPRK-207ENST00000368226 CCDC181Q5TID7 509 aa15.1■□□□□ 0.01
PTPRK-207ENST00000368226 IQSEC3Q9UPP2 1182 aaPredicted RBP15.1■□□□□ 0.01
PTPRK-207ENST00000368226 ZNF213O14771 459 aa15.1■□□□□ 0.01
PTPRK-207ENST00000368226 SSR1P43307 286 aaKnown RBP15.1■□□□□ 0.01
PTPRK-207ENST00000368226 ALDH1L2Q3SY69 923 aa15.1■□□□□ 0.01
PTPRK-207ENST00000368226 WASF1Q92558 559 aa15.1■□□□□ 0.01
PTPRK-207ENST00000368226 ZRANB1Q9UGI0 708 aa15.1■□□□□ 0.01
PTPRK-207ENST00000368226 LDHAL6AQ6ZMR3 332 aa15.1■□□□□ 0.01
PTPRK-207ENST00000368226 AXDND1Q5T1B0 1012 aaPredicted RBP15.1■□□□□ 0.01
PTPRK-207ENST00000368226 RFC4P35249 363 aa15.09■□□□□ 0.01
PTPRK-207ENST00000368226 SLC12A7Q9Y666 1083 aa15.09■□□□□ 0.01
PTPRK-207ENST00000368226 DHX37Q8IY37 1157 aaKnown RBP15.09■□□□□ 0.01
PTPRK-207ENST00000368226 C8orf37Q96NL8 207 aa15.09■□□□□ 0.01
PTPRK-207ENST00000368226 NEFHP12036 1026 aa15.09■□□□□ 0.01
PTPRK-207ENST00000368226 RDXP35241 583 aaKnown RBP15.09■□□□□ 0.01
PTPRK-207ENST00000368226 GRPEL1Q9HAV7 217 aa15.09■□□□□ 0.01
PTPRK-207ENST00000368226 IFIT3O14879 490 aaKnown RBP15.08■□□□□ 0.01
PTPRK-207ENST00000368226 EIF5P55010 431 aaKnown RBP15.08■□□□□ 0.01
PTPRK-207ENST00000368226 ENOX2Q16206 610 aaKnown RBP15.08■□□□□ 0.01
PTPRK-207ENST00000368226 FAM193AP78312 1265 aa15.08■□□□□ 0
PTPRK-207ENST00000368226 HSP90AB3PQ58FF7 597 aa15.08■□□□□ 0
PTPRK-207ENST00000368226 CENPHQ9H3R5 247 aa15.08■□□□□ 0
PTPRK-207ENST00000368226 CWC25Q9NXE8 425 aaPredicted RBP15.08■□□□□ 0
PTPRK-207ENST00000368226 URB2Q14146 1524 aaKnown RBP15.08■□□□□ 0
PTPRK-207ENST00000368226 GOLGA8BA8MQT2 603 aa15.08■□□□□ 0
PTPRK-207ENST00000368226 F8W031 263 aaPredicted RBP15.08■□□□□ 0
PTPRK-207ENST00000368226 CHPF2Q9P2E5 772 aa15.08■□□□□ 0
PTPRK-207ENST00000368226 CTCFLQ8NI51 663 aaPredicted RBP15.07■□□□□ 0
PTPRK-207ENST00000368226 LRRC59Q96AG4 307 aaKnown RBP15.07■□□□□ 0
PTPRK-207ENST00000368226 C14orf93Q9H972 538 aaKnown RBP15.07■□□□□ 0
PTPRK-207ENST00000368226 MYO6Q9UM54 1294 aa15.07■□□□□ 0
PTPRK-207ENST00000368226 THOC2Q8NI27 1593 aaKnown RBP15.07■□□□□ 0
PTPRK-207ENST00000368226 ANKRD62A6NC57 917 aa15.07■□□□□ 0
PTPRK-207ENST00000368226 GOLGA8AA7E2F4 631 aa15.07■□□□□ 0
PTPRK-207ENST00000368226 SCAF11Q99590 1463 aaKnown RBP15.07■□□□□ 0
PTPRK-207ENST00000368226 NCOA1Q15788 1441 aa15.07■□□□□ 0
PTPRK-207ENST00000368226 PPP1R42Q7Z4L9 355 aa15.07■□□□□ 0
PTPRK-207ENST00000368226 C8orf76Q96K31 380 aa15.07■□□□□ 0
PTPRK-207ENST00000368226 ZNF287Q9HBT7 754 aa15.07■□□□□ 0
PTPRK-207ENST00000368226 CFAP100Q494V2 611 aa15.06■□□□□ 0
PTPRK-207ENST00000368226 DDX46Q7L014 1031 aaKnown RBP15.06■□□□□ 0
PTPRK-207ENST00000368226 LRPPRCP42704 1394 aaKnown RBP15.06■□□□□ 0
PTPRK-207ENST00000368226 TNRQ92752 1358 aa15.06■□□□□ 0
PTPRK-207ENST00000368226 UBAP1LF5GYI3 381 aa15.06■□□□□ 0
PTPRK-207ENST00000368226 ECM2O94769 699 aaPredicted RBP15.06■□□□□ 0
PTPRK-207ENST00000368226 GDPD2Q9HCC8 539 aa15.06■□□□□ 0
PTPRK-207ENST00000368226 CCP110O43303 1012 aa15.06■□□□□ 0
PTPRK-207ENST00000368226 IL27Q8NEV9 243 aa15.06■□□□□ 0
PTPRK-207ENST00000368226 ATP6V1AP38606 617 aa15.05■□□□□ 0
PTPRK-207ENST00000368226 NLRP5P59047 1200 aa15.05■□□□□ 0
PTPRK-207ENST00000368226 IQCA1Q86XH1 822 aa15.05■□□□□ 0
PTPRK-207ENST00000368226 CEP131Q9UPN4 1083 aa15.05■□□□□ 0
PTPRK-207ENST00000368226 TMX1Q9H3N1 280 aa15.05■□□□□ -0
PTPRK-207ENST00000368226 CBFA2T2O43439 604 aa15.05■□□□□ -0
PTPRK-207ENST00000368226 MCM4P33991 863 aa15.05■□□□□ -0
PTPRK-207ENST00000368226 HSPA2P54652 639 aa15.05■□□□□ -0
PTPRK-207ENST00000368226 NBPF6Q5VWK0 638 aa15.05■□□□□ -0
PTPRK-207ENST00000368226 NBPF5PQ86XG9 351 aaPredicted RBP15.05■□□□□ -0
PTPRK-207ENST00000368226 NBPF4Q96M43 638 aa15.05■□□□□ -0
PTPRK-207ENST00000368226 PANK2Q9BZ23 570 aa15.05■□□□□ -0
PTPRK-207ENST00000368226 SSRP1Q08945 709 aaKnown RBP15.04■□□□□ -0
PTPRK-207ENST00000368226 ERCC4Q92889 916 aaPredicted RBP15.04■□□□□ -0
PTPRK-207ENST00000368226 GRM1Q13255 1194 aa15.04■□□□□ -0
PTPRK-207ENST00000368226 MAP3K11Q16584 847 aa15.04■□□□□ -0
PTPRK-207ENST00000368226 ABCC11Q96J66 1382 aa15.04■□□□□ -0
PTPRK-207ENST00000368226 FEZ1Q99689 392 aa15.04■□□□□ -0
PTPRK-207ENST00000368226 TTC21BQ7Z4L5 1316 aa15.04■□□□□ -0
PTPRK-207ENST00000368226 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.04■□□□□ -05e-6■■□□□ 12.8
PTPRK-207ENST00000368226 DNA2P51530 1060 aa15.04■□□□□ -0
PTPRK-207ENST00000368226 KIAA1328Q86T90 577 aa15.04■□□□□ -0
PTPRK-207ENST00000368226 SSFA2P28290 1259 aa15.03■□□□□ -0
PTPRK-207ENST00000368226 MICU3Q86XE3 530 aa15.03■□□□□ -0
PTPRK-207ENST00000368226 CKAP2LQ8IYA6 745 aa15.03■□□□□ -0
PTPRK-207ENST00000368226 TNIP1Q15025 636 aa15.03■□□□□ -0
PTPRK-207ENST00000368226 ISM2Q6H9L7 571 aa15.03■□□□□ -0
PTPRK-207ENST00000368226 SNRPA1P09661 255 aaKnown RBP15.03■□□□□ -0
PTPRK-207ENST00000368226 XAGE3Q8WTP9 111 aa15.03■□□□□ -0
PTPRK-207ENST00000368226 MSH6P52701 1360 aa15.03■□□□□ -0
PTPRK-207ENST00000368226 PTPRCP08575 1304 aa15.02■□□□□ -0
PTPRK-207ENST00000368226 CADPS2Q86UW7 1296 aa15.02■□□□□ -0
PTPRK-207ENST00000368226 TAX1BP1Q86VP1 789 aa15.02■□□□□ -0
PTPRK-207ENST00000368226 ZCRB1Q8TBF4 217 aaKnown RBP15.02■□□□□ -0
PTPRK-207ENST00000368226 TFIP11Q9UBB9 837 aaKnown RBP15.02■□□□□ -0
PTPRK-207ENST00000368226 TSPY2A6NKD2 308 aa15.02■□□□□ -0
PTPRK-207ENST00000368226 CDC5LQ99459 802 aaKnown RBP15.02■□□□□ -0
PTPRK-207ENST00000368226 LRRC2Q9BYS8 371 aa15.02■□□□□ -0
PTPRK-207ENST00000368226 LUC7LQ9NQ29 371 aaKnown RBP15.02■□□□□ -0
PTPRK-207ENST00000368226 KDM5BQ9UGL1 1544 aa15.02■□□□□ -0
PTPRK-207ENST00000368226 PPIP5K1Q6PFW1 1433 aa15.02□□□□□ -0.01
PTPRK-207ENST00000368226 IGHDP01880 384 aa15.02□□□□□ -0.01
PTPRK-207ENST00000368226 TMEM67Q5HYA8 995 aa15.02□□□□□ -0.01
PTPRK-207ENST00000368226 DHX29Q7Z478 1369 aaKnown RBP15.02□□□□□ -0.01
PTPRK-207ENST00000368226 ANKRD13DQ6ZTN6 518 aa15.01□□□□□ -0.01
PTPRK-207ENST00000368226 CATIPQ7Z7H3 387 aa15.01□□□□□ -0.01
PTPRK-207ENST00000368226 CUL5Q93034 780 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms