RNA–Protein interactions for RNA: ENST00000367186.7

SCAF8-202, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-202ENST00000367186 GOPCQ9HD26 462 aa12.19□□□□□ -0.46
SCAF8-202ENST00000367186 U3KPZ7 1027 aaPredicted RBP12.19□□□□□ -0.46
SCAF8-202ENST00000367186 HAND2P61296 217 aa12.19□□□□□ -0.46
SCAF8-202ENST00000367186 HLTFQ14527 1009 aaKnown RBP eCLIP12.19□□□□□ -0.463e-7■■■■□ 22
SCAF8-202ENST00000367186 NFE2L2Q16236 605 aa12.19□□□□□ -0.46
SCAF8-202ENST00000367186 CCDC183Q5T5S1 534 aa12.19□□□□□ -0.46
SCAF8-202ENST00000367186 ZSCAN25Q6NSZ9 544 aa12.19□□□□□ -0.46
SCAF8-202ENST00000367186 OSCARQ8IYS5 282 aa12.19□□□□□ -0.46
SCAF8-202ENST00000367186 CCDC148Q8NFR7 591 aa12.19□□□□□ -0.46
SCAF8-202ENST00000367186 SLC4A8Q2Y0W8 1093 aa12.18□□□□□ -0.46
SCAF8-202ENST00000367186 FSIP1Q8NA03 581 aa12.18□□□□□ -0.46
SCAF8-202ENST00000367186 CCDC97Q96F63 343 aaPredicted RBP12.18□□□□□ -0.46
SCAF8-202ENST00000367186 FCHSD2O94868 740 aa12.18□□□□□ -0.46
SCAF8-202ENST00000367186 ZNF165P49910 485 aa12.18□□□□□ -0.46
SCAF8-202ENST00000367186 IGSF3O75054 1194 aa12.18□□□□□ -0.46
SCAF8-202ENST00000367186 ADCY5O95622 1261 aa12.18□□□□□ -0.46
SCAF8-202ENST00000367186 USP8P40818 1118 aa12.18□□□□□ -0.46
SCAF8-202ENST00000367186 ANKRD18AQ8IVF6 992 aa12.18□□□□□ -0.46
SCAF8-202ENST00000367186 DRC1Q96MC2 740 aa12.18□□□□□ -0.46
SCAF8-202ENST00000367186 NAPBQ9H115 298 aa12.18□□□□□ -0.46
SCAF8-202ENST00000367186 IFIT1P09914 478 aaKnown RBP12.18□□□□□ -0.46
SCAF8-202ENST00000367186 IFFO1Q0D2I5 559 aa12.18□□□□□ -0.46
SCAF8-202ENST00000367186 TMC6Q7Z403 805 aa12.18□□□□□ -0.46
SCAF8-202ENST00000367186 NUP88Q99567 741 aaPredicted RBP12.18□□□□□ -0.46
SCAF8-202ENST00000367186 SRRTQ9BXP5 876 aaKnown RBP12.18□□□□□ -0.46
SCAF8-202ENST00000367186 CCDC178Q5BJE1 867 aa12.17□□□□□ -0.46
SCAF8-202ENST00000367186 PPP4R3BQ5MIZ7 849 aa12.17□□□□□ -0.46
SCAF8-202ENST00000367186 IQCEQ6IPM2 695 aa12.17□□□□□ -0.46
SCAF8-202ENST00000367186 GIMAP6Q6P9H5 292 aa12.17□□□□□ -0.46
SCAF8-202ENST00000367186 ANXA1P04083 346 aa12.17□□□□□ -0.46
SCAF8-202ENST00000367186 LIG1P18858 919 aa12.17□□□□□ -0.46
SCAF8-202ENST00000367186 WAPLQ7Z5K2 1190 aa12.17□□□□□ -0.46
SCAF8-202ENST00000367186 MKNK2Q9HBH9 465 aa12.17□□□□□ -0.46
SCAF8-202ENST00000367186 SERPINA10Q9UK55 444 aa12.17□□□□□ -0.46
SCAF8-202ENST00000367186 ATP2C2O75185 946 aa12.17□□□□□ -0.46
SCAF8-202ENST00000367186 CNNM3Q8NE01 707 aa12.17□□□□□ -0.46
SCAF8-202ENST00000367186 PRPF4BQ13523 1007 aaKnown RBP12.16□□□□□ -0.46
SCAF8-202ENST00000367186 ZSCAN12O43309 604 aa12.16□□□□□ -0.46
SCAF8-202ENST00000367186 ZNF397Q8NF99 534 aaPredicted RBP12.16□□□□□ -0.46
SCAF8-202ENST00000367186 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.16□□□□□ -0.46
SCAF8-202ENST00000367186 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.16□□□□□ -0.46
SCAF8-202ENST00000367186 V9GYY5 206 aaPredicted RBP12.16□□□□□ -0.46
SCAF8-202ENST00000367186 SHTN1A0MZ66 631 aa12.16□□□□□ -0.46
SCAF8-202ENST00000367186 NEBLO76041 1014 aa12.16□□□□□ -0.46
SCAF8-202ENST00000367186 MYD88Q99836 296 aa12.16□□□□□ -0.46
SCAF8-202ENST00000367186 LIMCH1Q9UPQ0 1083 aa12.16□□□□□ -0.46
SCAF8-202ENST00000367186 SMG6Q86US8 1419 aaKnown RBP12.16□□□□□ -0.46
SCAF8-202ENST00000367186 TCERG1LQ5VWI1 586 aa12.16□□□□□ -0.46
SCAF8-202ENST00000367186 ZNF692Q9BU19 519 aaPredicted RBP12.16□□□□□ -0.46
SCAF8-202ENST00000367186 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.16□□□□□ -0.46
SCAF8-202ENST00000367186 MYO1BO43795 1136 aa12.15□□□□□ -0.46
SCAF8-202ENST00000367186 GBP2P32456 591 aaPredicted RBP12.15□□□□□ -0.46
SCAF8-202ENST00000367186 RAPGEF3O95398 923 aa12.15□□□□□ -0.46
SCAF8-202ENST00000367186 FBLN1P23142 703 aa12.15□□□□□ -0.46
SCAF8-202ENST00000367186 CASQ1P31415 396 aa12.15□□□□□ -0.46
SCAF8-202ENST00000367186 LMAN1P49257 510 aa12.15□□□□□ -0.46
SCAF8-202ENST00000367186 CCDC96Q2M329 555 aa12.15□□□□□ -0.46
SCAF8-202ENST00000367186 MPRIPQ6WCQ1 1025 aa12.15□□□□□ -0.46
SCAF8-202ENST00000367186 TXLNBQ8N3L3 684 aa12.15□□□□□ -0.46
SCAF8-202ENST00000367186 GPATCH11Q8N954 259 aa12.15□□□□□ -0.46
SCAF8-202ENST00000367186 ARAP1Q96P48 1450 aa12.15□□□□□ -0.46
SCAF8-202ENST00000367186 TMCO5BA8MYB1 307 aa12.15□□□□□ -0.46
SCAF8-202ENST00000367186 TRIM27P14373 513 aa12.15□□□□□ -0.46
SCAF8-202ENST00000367186 GIMAP7Q8NHV1 300 aa12.15□□□□□ -0.46
SCAF8-202ENST00000367186 LRRC2Q9BYS8 371 aa12.15□□□□□ -0.46
SCAF8-202ENST00000367186 VAT1LQ9HCJ6 419 aa12.15□□□□□ -0.46
SCAF8-202ENST00000367186 EMILIN1Q9Y6C2 1016 aa12.15□□□□□ -0.46
SCAF8-202ENST00000367186 GOLGA8BA8MQT2 603 aa12.15□□□□□ -0.46
SCAF8-202ENST00000367186 BAG4O95429 457 aaKnown RBP12.15□□□□□ -0.46
SCAF8-202ENST00000367186 IGHMBP2P38935 993 aaKnown RBP12.15□□□□□ -0.46
SCAF8-202ENST00000367186 PAFAH1B1P43034 410 aa12.15□□□□□ -0.46
SCAF8-202ENST00000367186 MICU3Q86XE3 530 aa12.15□□□□□ -0.46
SCAF8-202ENST00000367186 NECAB1Q8N987 351 aa12.15□□□□□ -0.46
SCAF8-202ENST00000367186 SMARCC1Q92922 1105 aaPredicted RBP12.15□□□□□ -0.46
SCAF8-202ENST00000367186 GPTP24298 496 aa12.14□□□□□ -0.47
SCAF8-202ENST00000367186 IFIT3O14879 490 aaKnown RBP12.14□□□□□ -0.47
SCAF8-202ENST00000367186 GNG11P61952 73 aa12.14□□□□□ -0.47
SCAF8-202ENST00000367186 TBC1D9Q6ZT07 1266 aa12.14□□□□□ -0.47
SCAF8-202ENST00000367186 MAGI1Q96QZ7 1491 aaPredicted RBP12.14□□□□□ -0.47
SCAF8-202ENST00000367186 GBP3Q9H0R5 595 aa12.14□□□□□ -0.47
SCAF8-202ENST00000367186 GNAT3A8MTJ3 354 aa12.14□□□□□ -0.47
SCAF8-202ENST00000367186 IGHDP01880 384 aa12.14□□□□□ -0.47
SCAF8-202ENST00000367186 FKBP15Q5T1M5 1219 aa12.14□□□□□ -0.47
SCAF8-202ENST00000367186 WDR78Q5VTH9 848 aa12.14□□□□□ -0.47
SCAF8-202ENST00000367186 CTCFLQ8NI51 663 aaPredicted RBP12.14□□□□□ -0.47
SCAF8-202ENST00000367186 WASF1Q92558 559 aa12.14□□□□□ -0.47
SCAF8-202ENST00000367186 ZNF219Q9P2Y4 722 aaPredicted RBP12.14□□□□□ -0.47
SCAF8-202ENST00000367186 GRIN2AQ12879 1464 aa12.14□□□□□ -0.47
SCAF8-202ENST00000367186 TTC16Q8NEE8 873 aa12.13□□□□□ -0.47
SCAF8-202ENST00000367186 RRBP1Q9P2E9 1410 aaKnown RBP12.13□□□□□ -0.47
SCAF8-202ENST00000367186 ATP5J2-PTCD1G3V325 749 aa12.13□□□□□ -0.47
SCAF8-202ENST00000367186 GJB2P29033 226 aa12.13□□□□□ -0.47
SCAF8-202ENST00000367186 ZMYND15Q9H091 742 aa12.13□□□□□ -0.47
SCAF8-202ENST00000367186 ZBTB3Q9H5J0 574 aa12.13□□□□□ -0.47
SCAF8-202ENST00000367186 CCDC61Q9Y6R9 512 aa12.13□□□□□ -0.47
SCAF8-202ENST00000367186 NOP2P46087 812 aaKnown RBP12.13□□□□□ -0.47
SCAF8-202ENST00000367186 NME9Q86XW9 330 aa12.13□□□□□ -0.47
SCAF8-202ENST00000367186 PSMD1Q99460 953 aa12.13□□□□□ -0.47
SCAF8-202ENST00000367186 SYNJ2O15056 1496 aa12.13□□□□□ -0.47
SCAF8-202ENST00000367186 KIF2AO00139 706 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms