RNA–Protein interactions for RNA: ENST00000366857.9

CNIH4-202, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 1 (best) BASIC

Gene CNIH4, Length 3,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-202ENST00000366857 PHAXQ9H814 394 aaKnown RBP11.89□□□□□ -0.51
CNIH4-202ENST00000366857 MYH15Q9Y2K3 1946 aa11.89□□□□□ -0.51
CNIH4-202ENST00000366857 ONECUT3O60422 494 aaPredicted RBP11.88□□□□□ -0.51
CNIH4-202ENST00000366857 ZC3H6P61129 1189 aaKnown RBP11.88□□□□□ -0.51
CNIH4-202ENST00000366857 PCDH11XQ9BZA7 1347 aa11.88□□□□□ -0.51
CNIH4-202ENST00000366857 PCDH11YQ9BZA8 1340 aa11.88□□□□□ -0.51
CNIH4-202ENST00000366857 FOCADQ5VW36 1801 aa11.88□□□□□ -0.51
CNIH4-202ENST00000366857 JCADQ9P266 1359 aa11.88□□□□□ -0.51
CNIH4-202ENST00000366857 FLIIQ13045 1269 aa11.88□□□□□ -0.51
CNIH4-202ENST00000366857 BARGINQ6ZT62 677 aa11.88□□□□□ -0.51
CNIH4-202ENST00000366857 FNBP4Q8N3X1 1017 aaPredicted RBP11.88□□□□□ -0.51
CNIH4-202ENST00000366857 KIF2CQ99661 725 aa11.88□□□□□ -0.51
CNIH4-202ENST00000366857 PDZRN3Q9UPQ7 1066 aa11.88□□□□□ -0.51
CNIH4-202ENST00000366857 KIF13BQ9NQT8 1826 aa11.88□□□□□ -0.51
CNIH4-202ENST00000366857 ECM29Q5VYK3 1845 aa11.87□□□□□ -0.51
CNIH4-202ENST00000366857 TSPYL4Q9UJ04 414 aa11.87□□□□□ -0.51
CNIH4-202ENST00000366857 MPRIPQ6WCQ1 1025 aa11.87□□□□□ -0.51
CNIH4-202ENST00000366857 API5Q9BZZ5 524 aaKnown RBP11.87□□□□□ -0.51
CNIH4-202ENST00000366857 DDX60LQ5H9U9 1706 aaKnown RBP11.87□□□□□ -0.51
CNIH4-202ENST00000366857 NBPF26B4DH59 902 aa11.87□□□□□ -0.51
CNIH4-202ENST00000366857 CHRNA2Q15822 529 aa11.87□□□□□ -0.51
CNIH4-202ENST00000366857 NBPF14Q5TI25 921 aa11.87□□□□□ -0.51
CNIH4-202ENST00000366857 NBPF10Q6P3W6 841 aaKnown RBP11.87□□□□□ -0.51
CNIH4-202ENST00000366857 NBPF15Q8N660 670 aa11.87□□□□□ -0.51
CNIH4-202ENST00000366857 TAF1P21675 1872 aa11.87□□□□□ -0.51
CNIH4-202ENST00000366857 IGKV5-2P06315 115 aa11.86□□□□□ -0.51
CNIH4-202ENST00000366857 IPO8O15397 1037 aaKnown RBP11.86□□□□□ -0.51
CNIH4-202ENST00000366857 SSH3Q8TE77 659 aa11.86□□□□□ -0.51
CNIH4-202ENST00000366857 MEIS3Q99687 375 aa11.86□□□□□ -0.51
CNIH4-202ENST00000366857 ERBB4Q15303 1308 aa11.86□□□□□ -0.51
CNIH4-202ENST00000366857 DDIT3P35638 169 aa11.86□□□□□ -0.51
CNIH4-202ENST00000366857 THRAP3Q9Y2W1 955 aaKnown RBP11.86□□□□□ -0.51
CNIH4-202ENST00000366857 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.86□□□□□ -0.51
CNIH4-202ENST00000366857 SLC4A2P04920 1241 aa11.85□□□□□ -0.51
CNIH4-202ENST00000366857 GSPT1P15170 499 aaKnown RBP11.85□□□□□ -0.51
CNIH4-202ENST00000366857 CERKQ8TCT0 537 aa11.85□□□□□ -0.51
CNIH4-202ENST00000366857 MAST2Q6P0Q8 1798 aa11.85□□□□□ -0.51
CNIH4-202ENST00000366857 ZNF530Q6P9A1 599 aaPredicted RBP11.85□□□□□ -0.51
CNIH4-202ENST00000366857 IFNL2Q8IZJ0 200 aa11.85□□□□□ -0.51
CNIH4-202ENST00000366857 NOP58Q9Y2X3 529 aaKnown RBP11.85□□□□□ -0.51
CNIH4-202ENST00000366857 RFX5P48382 616 aaPredicted RBP11.84□□□□□ -0.51
CNIH4-202ENST00000366857 SOX12O15370 315 aa11.84□□□□□ -0.51
CNIH4-202ENST00000366857 GCC1Q96CN9 775 aa11.84□□□□□ -0.51
CNIH4-202ENST00000366857 CHPF2Q9P2E5 772 aa11.84□□□□□ -0.51
CNIH4-202ENST00000366857 RABL6Q3YEC7 729 aaPredicted RBP11.84□□□□□ -0.51
CNIH4-202ENST00000366857 VSIG10Q8N0Z9 540 aa11.84□□□□□ -0.51
CNIH4-202ENST00000366857 BTBD11A6QL63 1104 aa11.83□□□□□ -0.52
CNIH4-202ENST00000366857 CCDC30Q5VVM6 783 aa11.83□□□□□ -0.52
CNIH4-202ENST00000366857 FRAT1Q92837 279 aaPredicted RBP11.83□□□□□ -0.52
CNIH4-202ENST00000366857 STAP2Q9UGK3 403 aa11.83□□□□□ -0.52
CNIH4-202ENST00000366857 PLEKHM2Q8IWE5 1019 aa11.83□□□□□ -0.52
CNIH4-202ENST00000366857 DDX21Q9NR30 783 aaKnown RBP eCLIP11.83□□□□□ -0.52
CNIH4-202ENST00000366857 CCT4P50991 539 aaKnown RBP11.82□□□□□ -0.52
CNIH4-202ENST00000366857 RPAP2Q8IXW5 612 aaPredicted RBP11.82□□□□□ -0.52
CNIH4-202ENST00000366857 ZNF496Q96IT1 587 aaPredicted RBP11.82□□□□□ -0.52
CNIH4-202ENST00000366857 NFATC2IPQ8NCF5 419 aa11.82□□□□□ -0.52
CNIH4-202ENST00000366857 SNRKQ9NRH2 765 aa11.82□□□□□ -0.52
CNIH4-202ENST00000366857 PNMA6EA0A0J9YXQ4 647 aa11.82□□□□□ -0.52
CNIH4-202ENST00000366857 MYH13Q9UKX3 1938 aa11.82□□□□□ -0.52
CNIH4-202ENST00000366857 COL11A2P13942 1736 aaPredicted RBP11.82□□□□□ -0.52
CNIH4-202ENST00000366857 CHD4Q14839 1912 aa11.81□□□□□ -0.52
CNIH4-202ENST00000366857 ATP8B2P98198 1209 aa11.81□□□□□ -0.52
CNIH4-202ENST00000366857 IL2RBP14784 551 aa11.81□□□□□ -0.52
CNIH4-202ENST00000366857 SPG7Q9UQ90 795 aa11.81□□□□□ -0.52
CNIH4-202ENST00000366857 FAM161AQ3B820 660 aa11.81□□□□□ -0.52
CNIH4-202ENST00000366857 CHD1LQ86WJ1 897 aa11.81□□□□□ -0.52
CNIH4-202ENST00000366857 LTV1Q96GA3 475 aaPredicted RBP11.8□□□□□ -0.52
CNIH4-202ENST00000366857 PSME4Q14997 1843 aa11.8□□□□□ -0.52
CNIH4-202ENST00000366857 F6X3S4 739 aa11.8□□□□□ -0.52
CNIH4-202ENST00000366857 BMP2KLQ5H9B9 411 aa11.8□□□□□ -0.52
CNIH4-202ENST00000366857 ATG3Q9NT62 314 aa11.8□□□□□ -0.52
CNIH4-202ENST00000366857 TIAM2Q8IVF5 1701 aa11.8□□□□□ -0.52
CNIH4-202ENST00000366857 ELL2O00472 640 aaPredicted RBP11.8□□□□□ -0.52
CNIH4-202ENST00000366857 HAP1P54257 671 aaPredicted RBP11.8□□□□□ -0.52
CNIH4-202ENST00000366857 USP16Q9Y5T5 823 aa11.8□□□□□ -0.52
CNIH4-202ENST00000366857 RWDD1Q9H446 243 aaPredicted RBP11.79□□□□□ -0.52
CNIH4-202ENST00000366857 BRCA1P38398 1863 aaKnown RBP11.79□□□□□ -0.52
CNIH4-202ENST00000366857 ZCRB1Q8TBF4 217 aaKnown RBP11.79□□□□□ -0.52
CNIH4-202ENST00000366857 NBPF7P0C2Y1 421 aaPredicted RBP11.79□□□□□ -0.52
CNIH4-202ENST00000366857 RBM25P49756 843 aaKnown RBP11.79□□□□□ -0.52
CNIH4-202ENST00000366857 CACNA1SQ13698 1873 aa11.79□□□□□ -0.52
CNIH4-202ENST00000366857 LAMB1P07942 1786 aa11.79□□□□□ -0.52
CNIH4-202ENST00000366857 DBF4Q9UBU7 674 aaPredicted RBP11.78□□□□□ -0.52
CNIH4-202ENST00000366857 TATP17735 454 aaPredicted RBP11.78□□□□□ -0.52
CNIH4-202ENST00000366857 KSR2Q6VAB6 950 aa11.78□□□□□ -0.52
CNIH4-202ENST00000366857 ITPRIPQ8IWB1 547 aa11.78□□□□□ -0.52
CNIH4-202ENST00000366857 PIGBQ92521 554 aa11.78□□□□□ -0.52
CNIH4-202ENST00000366857 RTF1Q92541 710 aaKnown RBP11.78□□□□□ -0.52
CNIH4-202ENST00000366857 AOX1Q06278 1338 aa11.78□□□□□ -0.52
CNIH4-202ENST00000366857 TBC1D32Q96NH3 1257 aa11.77□□□□□ -0.52
CNIH4-202ENST00000366857 ALDH1L1O75891 902 aa11.77□□□□□ -0.52
CNIH4-202ENST00000366857 FOXO4P98177 505 aa11.77□□□□□ -0.53
CNIH4-202ENST00000366857 PI4K2BQ8TCG2 481 aa11.77□□□□□ -0.53
CNIH4-202ENST00000366857 ZBTB22O15209 634 aa11.77□□□□□ -0.53
CNIH4-202ENST00000366857 C1orf115Q9H7X2 142 aa11.77□□□□□ -0.53
CNIH4-202ENST00000366857 BTG4Q9NY30 223 aa11.77□□□□□ -0.53
CNIH4-202ENST00000366857 LAS1LQ9Y4W2 734 aaKnown RBP11.77□□□□□ -0.53
CNIH4-202ENST00000366857 SPATA31A6Q5VVP1 1343 aa11.76□□□□□ -0.53
CNIH4-202ENST00000366857 C14orf37Q86TY3 774 aa11.76□□□□□ -0.53
CNIH4-202ENST00000366857 ANTXR1Q9H6X2 564 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms