RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 RIMS1Q86UR5 1692 aaKnown RBP23.67■■□□□ 1.38
TRIM58-201ENST00000366481 CCT4P50991 539 aaKnown RBP23.67■■□□□ 1.38
TRIM58-201ENST00000366481 ADCY5O95622 1261 aa23.67■■□□□ 1.38
TRIM58-201ENST00000366481 MX1P20591 662 aa23.67■■□□□ 1.38
TRIM58-201ENST00000366481 PDCL2Q8N4E4 241 aa23.67■■□□□ 1.38
TRIM58-201ENST00000366481 OVOS2A0A0J9YW53 1432 aa23.67■■□□□ 1.38
TRIM58-201ENST00000366481 OVOS2Q6IE36 1432 aa23.67■■□□□ 1.38
TRIM58-201ENST00000366481 ADAMTS13Q76LX8 1427 aa23.67■■□□□ 1.38
TRIM58-201ENST00000366481 KIAA0232Q92628 1395 aa23.67■■□□□ 1.38
TRIM58-201ENST00000366481 SETD1AO15047 1707 aaKnown RBP23.67■■□□□ 1.38
TRIM58-201ENST00000366481 PRIMPOLQ96LW4 560 aa23.67■■□□□ 1.38
TRIM58-201ENST00000366481 GADD45BO75293 160 aaPredicted RBP23.65■■□□□ 1.38
TRIM58-201ENST00000366481 SPC24Q8NBT2 197 aa23.65■■□□□ 1.38
TRIM58-201ENST00000366481 PTPRUQ92729 1446 aa23.65■■□□□ 1.38
TRIM58-201ENST00000366481 HCLS1P14317 486 aaPredicted RBP23.65■■□□□ 1.38
TRIM58-201ENST00000366481 GNAT3A8MTJ3 354 aa23.64■■□□□ 1.38
TRIM58-201ENST00000366481 ATP2B3Q16720 1220 aa23.64■■□□□ 1.37
TRIM58-201ENST00000366481 HDGFL1Q5TGJ6 251 aa23.63■■□□□ 1.37
TRIM58-201ENST00000366481 PIBF1Q8WXW3 757 aa23.63■■□□□ 1.37
TRIM58-201ENST00000366481 CCDC30Q5VVM6 783 aa23.63■■□□□ 1.37
TRIM58-201ENST00000366481 ZNF710Q8N1W2 664 aa23.63■■□□□ 1.37
TRIM58-201ENST00000366481 KCNQ3O43525 872 aa23.63■■□□□ 1.37
TRIM58-201ENST00000366481 SURF6O75683 361 aaKnown RBP23.63■■□□□ 1.37
TRIM58-201ENST00000366481 ZNF771Q7L3S4 317 aaPredicted RBP23.63■■□□□ 1.37
TRIM58-201ENST00000366481 ESYT1Q9BSJ8 1104 aa23.63■■□□□ 1.37
TRIM58-201ENST00000366481 KIF24Q5T7B8 1368 aa23.62■■□□□ 1.37
TRIM58-201ENST00000366481 FLT4P35916 1363 aa23.62■■□□□ 1.37
TRIM58-201ENST00000366481 CEP170BQ9Y4F5 1589 aaPredicted RBP23.62■■□□□ 1.37
TRIM58-201ENST00000366481 SIRT1Q96EB6 747 aa23.62■■□□□ 1.37
TRIM58-201ENST00000366481 MCCP23508 829 aa23.61■■□□□ 1.37
TRIM58-201ENST00000366481 DDX54Q8TDD1 881 aaKnown RBP23.61■■□□□ 1.37
TRIM58-201ENST00000366481 PEAK1Q9H792 1746 aa23.61■■□□□ 1.37
TRIM58-201ENST00000366481 UBTFL1P0CB47 393 aaPredicted RBP23.61■■□□□ 1.37
TRIM58-201ENST00000366481 UTP14CQ5TAP6 766 aaKnown RBP23.61■■□□□ 1.37
TRIM58-201ENST00000366481 USP44Q9H0E7 712 aa23.61■■□□□ 1.37
TRIM58-201ENST00000366481 BCL2L12Q9HB09 334 aa23.61■■□□□ 1.37
TRIM58-201ENST00000366481 HOXC9P31274 260 aa23.61■■□□□ 1.37
TRIM58-201ENST00000366481 USP48Q86UV5 1035 aa23.61■■□□□ 1.37
TRIM58-201ENST00000366481 LGR6Q9HBX8 967 aa23.61■■□□□ 1.37
TRIM58-201ENST00000366481 KCNA6P17658 529 aa23.6■■□□□ 1.37
TRIM58-201ENST00000366481 C3P01024 1663 aa23.6■■□□□ 1.37
TRIM58-201ENST00000366481 U2AF2P26368 475 aaKnown RBP eCLIP23.59■■□□□ 1.37
TRIM58-201ENST00000366481 CHMLP26374 656 aa23.59■■□□□ 1.37
TRIM58-201ENST00000366481 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.59■■□□□ 1.37
TRIM58-201ENST00000366481 TECPR2O15040 1411 aa23.59■■□□□ 1.37
TRIM58-201ENST00000366481 AGLP35573 1532 aa23.58■■□□□ 1.37
TRIM58-201ENST00000366481 NBPF7P0C2Y1 421 aaPredicted RBP23.58■■□□□ 1.37
TRIM58-201ENST00000366481 ATP8B2P98198 1209 aa23.58■■□□□ 1.37
TRIM58-201ENST00000366481 PPP1R42Q7Z4L9 355 aa23.58■■□□□ 1.37
TRIM58-201ENST00000366481 GNAI3P08754 354 aa23.58■■□□□ 1.37
TRIM58-201ENST00000366481 GTPBP4Q9BZE4 634 aaKnown RBP23.58■■□□□ 1.37
TRIM58-201ENST00000366481 IGSF1Q8N6C5 1336 aa23.58■■□□□ 1.36
TRIM58-201ENST00000366481 CPA1P15085 419 aa23.57■■□□□ 1.36
TRIM58-201ENST00000366481 BBXQ8WY36 941 aaPredicted RBP23.57■■□□□ 1.36
TRIM58-201ENST00000366481 SBNO1A3KN83 1393 aa23.57■■□□□ 1.36
TRIM58-201ENST00000366481 MON2Q7Z3U7 1717 aa23.57■■□□□ 1.36
TRIM58-201ENST00000366481 LRRC59Q96AG4 307 aaKnown RBP23.57■■□□□ 1.36
TRIM58-201ENST00000366481 DIAPH3Q9NSV4 1193 aa23.57■■□□□ 1.36
TRIM58-201ENST00000366481 SRGAP3O43295 1099 aa23.56■■□□□ 1.36
TRIM58-201ENST00000366481 FIBPO43427 364 aa23.56■■□□□ 1.36
TRIM58-201ENST00000366481 BRD1O95696 1058 aa23.56■■□□□ 1.36
TRIM58-201ENST00000366481 FAM184AQ8NB25 1140 aa23.56■■□□□ 1.36
TRIM58-201ENST00000366481 CHMP3Q9Y3E7 222 aa23.56■■□□□ 1.36
TRIM58-201ENST00000366481 TAF7Q15545 349 aaPredicted RBP23.55■■□□□ 1.36
TRIM58-201ENST00000366481 ARHGEF10O15013 1369 aa23.55■■□□□ 1.36
TRIM58-201ENST00000366481 USP31Q70CQ4 1352 aa23.55■■□□□ 1.36
TRIM58-201ENST00000366481 CHPF2Q9P2E5 772 aa23.55■■□□□ 1.36
TRIM58-201ENST00000366481 MPRIPQ6WCQ1 1025 aa23.54■■□□□ 1.36
TRIM58-201ENST00000366481 DRC7Q8IY82 874 aa23.54■■□□□ 1.36
TRIM58-201ENST00000366481 SPG7Q9UQ90 795 aa23.54■■□□□ 1.36
TRIM58-201ENST00000366481 ITSN1Q15811 1721 aa23.54■■□□□ 1.36
TRIM58-201ENST00000366481 OS9Q13438 667 aaPredicted RBP23.54■■□□□ 1.36
TRIM58-201ENST00000366481 SETD1BQ9UPS6 1966 aaKnown RBP23.54■■□□□ 1.36
TRIM58-201ENST00000366481 PI4KAP2A4QPH2 592 aa23.54■■□□□ 1.36
TRIM58-201ENST00000366481 RIOK3O14730 519 aaKnown RBP23.54■■□□□ 1.36
TRIM58-201ENST00000366481 PI4KAP1Q8N8J0 262 aa23.54■■□□□ 1.36
TRIM58-201ENST00000366481 CGNQ9P2M7 1197 aaKnown RBP23.54■■□□□ 1.36
TRIM58-201ENST00000366481 OSBPL3Q9H4L5 887 aa23.53■■□□□ 1.36
TRIM58-201ENST00000366481 CWC27Q6UX04 472 aaKnown RBP23.53■■□□□ 1.36
TRIM58-201ENST00000366481 LETM1O95202 739 aaPredicted RBP23.52■■□□□ 1.36
TRIM58-201ENST00000366481 MCM2P49736 904 aa23.52■■□□□ 1.36
TRIM58-201ENST00000366481 GIMAP6Q6P9H5 292 aa23.52■■□□□ 1.36
TRIM58-201ENST00000366481 CNPY2Q9Y2B0 182 aa23.52■■□□□ 1.36
TRIM58-201ENST00000366481 NBPF6Q5VWK0 638 aa23.52■■□□□ 1.35
TRIM58-201ENST00000366481 NBPF4Q96M43 638 aa23.52■■□□□ 1.35
TRIM58-201ENST00000366481 KIF20AO95235 890 aa23.51■■□□□ 1.35
TRIM58-201ENST00000366481 FGD1P98174 961 aa23.51■■□□□ 1.35
TRIM58-201ENST00000366481 CCDC183Q5T5S1 534 aa23.51■■□□□ 1.35
TRIM58-201ENST00000366481 SOS1Q07889 1333 aaPredicted RBP23.51■■□□□ 1.35
TRIM58-201ENST00000366481 TTC21AQ8NDW8 1320 aa23.51■■□□□ 1.35
TRIM58-201ENST00000366481 SALL3Q9BXA9 1300 aa23.51■■□□□ 1.35
TRIM58-201ENST00000366481 WDR33Q9C0J8 1336 aaKnown RBP23.5■■□□□ 1.35
TRIM58-201ENST00000366481 PRAMEF22A3QJZ6 481 aa23.5■■□□□ 1.35
TRIM58-201ENST00000366481 SRCIN1Q9C0H9 1055 aa23.5■■□□□ 1.35
TRIM58-201ENST00000366481 UVSSAQ2YD98 709 aa23.5■■□□□ 1.35
TRIM58-201ENST00000366481 PA2G4Q9UQ80 394 aaKnown RBP23.5■■□□□ 1.35
TRIM58-201ENST00000366481 PLEKHG1Q9ULL1 1385 aa23.49■■□□□ 1.35
TRIM58-201ENST00000366481 RHPN1Q8TCX5 695 aa23.48■■□□□ 1.35
TRIM58-201ENST00000366481 AKAP12Q02952 1782 aa23.48■■□□□ 1.35
TRIM58-201ENST00000366481 KDRP35968 1356 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms