RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 C4BP0C0L5 1744 aa8.8□□□□□ -1
RNU1-55P-201ENST00000365510 PHKG2P15735 406 aa8.8□□□□□ -1
RNU1-55P-201ENST00000365510 MCM10Q7L590 875 aa8.8□□□□□ -1
RNU1-55P-201ENST00000365510 DNAJC5GQ8N7S2 189 aa8.8□□□□□ -1
RNU1-55P-201ENST00000365510 FLAD1Q8NFF5 587 aa8.8□□□□□ -1
RNU1-55P-201ENST00000365510 SMARCC1Q92922 1105 aaPredicted RBP8.8□□□□□ -1
RNU1-55P-201ENST00000365510 IFT57Q9NWB7 429 aa8.8□□□□□ -1
RNU1-55P-201ENST00000365510 N4BP2Q86UW6 1770 aaPredicted RBP8.8□□□□□ -1
RNU1-55P-201ENST00000365510 UBR3Q6ZT12 1888 aa8.79□□□□□ -1
RNU1-55P-201ENST00000365510 ADCY9O60503 1353 aa8.79□□□□□ -1
RNU1-55P-201ENST00000365510 CEMIPQ8WUJ3 1361 aa8.79□□□□□ -1
RNU1-55P-201ENST00000365510 KCNA3P22001 575 aa8.79□□□□□ -1
RNU1-55P-201ENST00000365510 CHRNA5P30532 468 aa8.79□□□□□ -1
RNU1-55P-201ENST00000365510 DCTN1Q14203 1278 aa8.79□□□□□ -1
RNU1-55P-201ENST00000365510 TRAPPC3LQ5T215 181 aa8.79□□□□□ -1
RNU1-55P-201ENST00000365510 DCAF5Q96JK2 942 aa8.79□□□□□ -1
RNU1-55P-201ENST00000365510 THUMPD2Q9BTF0 503 aaKnown RBP8.79□□□□□ -1
RNU1-55P-201ENST00000365510 KDM6AO15550 1401 aaPredicted RBP8.79□□□□□ -1
RNU1-55P-201ENST00000365510 MRC1P22897 1456 aa8.78□□□□□ -1
RNU1-55P-201ENST00000365510 RNMTO43148 476 aaKnown RBP8.78□□□□□ -1
RNU1-55P-201ENST00000365510 PTCD1O75127 700 aaKnown RBP8.78□□□□□ -1
RNU1-55P-201ENST00000365510 GNAI1P63096 354 aa8.78□□□□□ -1
RNU1-55P-201ENST00000365510 SLFN5Q08AF3 891 aa8.78□□□□□ -1
RNU1-55P-201ENST00000365510 TEFQ10587 303 aa8.78□□□□□ -1
RNU1-55P-201ENST00000365510 CDCA7LQ96GN5 454 aa8.78□□□□□ -1
RNU1-55P-201ENST00000365510 CFAP44Q96MT7 982 aa8.78□□□□□ -1
RNU1-55P-201ENST00000365510 LAS1LQ9Y4W2 734 aaKnown RBP8.78□□□□□ -1
RNU1-55P-201ENST00000365510 ADAMTS7Q9UKP4 1686 aa8.78□□□□□ -1
RNU1-55P-201ENST00000365510 FANCIQ9NVI1 1328 aa8.78□□□□□ -1
RNU1-55P-201ENST00000365510 CAPN15O75808 1086 aa8.77□□□□□ -1.01
RNU1-55P-201ENST00000365510 GYS1P13807 737 aa8.77□□□□□ -1.01
RNU1-55P-201ENST00000365510 SSFA2P28290 1259 aa8.77□□□□□ -1.01
RNU1-55P-201ENST00000365510 FKBP8Q14318 412 aa8.77□□□□□ -1.01
RNU1-55P-201ENST00000365510 C9orf131Q5VYM1 1079 aa8.77□□□□□ -1.01
RNU1-55P-201ENST00000365510 DUSP27Q5VZP5 1158 aa8.77□□□□□ -1.01
RNU1-55P-201ENST00000365510 IL17REQ8NFR9 667 aa8.77□□□□□ -1.01
RNU1-55P-201ENST00000365510 RRAGCQ9HB90 399 aa8.77□□□□□ -1.01
RNU1-55P-201ENST00000365510 SPINK5Q9NQ38 1064 aaPredicted RBP8.77□□□□□ -1.01
RNU1-55P-201ENST00000365510 BABAM1Q9NWV8 329 aa8.77□□□□□ -1.01
RNU1-55P-201ENST00000365510 TSPYL4Q9UJ04 414 aa8.77□□□□□ -1.01
RNU1-55P-201ENST00000365510 MYH14Q7Z406 1995 aaKnown RBP8.76□□□□□ -1.01
RNU1-55P-201ENST00000365510 PRELPP51888 382 aa8.76□□□□□ -1.01
RNU1-55P-201ENST00000365510 DDR1Q08345 913 aa8.76□□□□□ -1.01
RNU1-55P-201ENST00000365510 NFATC2IPQ8NCF5 419 aa8.76□□□□□ -1.01
RNU1-55P-201ENST00000365510 TSR2Q969E8 191 aaKnown RBP8.76□□□□□ -1.01
RNU1-55P-201ENST00000365510 RTCBQ9Y3I0 505 aaKnown RBP8.76□□□□□ -1.01
RNU1-55P-201ENST00000365510 PXDNLA1KZ92 1463 aa8.76□□□□□ -1.01
RNU1-55P-201ENST00000365510 SCN11AQ9UI33 1791 aa8.76□□□□□ -1.01
RNU1-55P-201ENST00000365510 ERVV-2B6SEH9 535 aa8.75□□□□□ -1.01
RNU1-55P-201ENST00000365510 CHL1O00533 1208 aa8.75□□□□□ -1.01
RNU1-55P-201ENST00000365510 RPS6KA4O75676 772 aa8.75□□□□□ -1.01
RNU1-55P-201ENST00000365510 CT47B1P0C2W7 299 aaPredicted RBP8.75□□□□□ -1.01
RNU1-55P-201ENST00000365510 ZNF853P0CG23 659 aa8.75□□□□□ -1.01
RNU1-55P-201ENST00000365510 RFC4P35249 363 aa8.75□□□□□ -1.01
RNU1-55P-201ENST00000365510 CABP4P57796 275 aa8.75□□□□□ -1.01
RNU1-55P-201ENST00000365510 SLC39A6Q13433 755 aa8.75□□□□□ -1.01
RNU1-55P-201ENST00000365510 TAF7Q15545 349 aaPredicted RBP8.75□□□□□ -1.01
RNU1-55P-201ENST00000365510 COL13A1Q5TAT6 717 aaPredicted RBP8.75□□□□□ -1.01
RNU1-55P-201ENST00000365510 TRMT2AQ8IZ69 625 aaKnown RBP8.75□□□□□ -1.01
RNU1-55P-201ENST00000365510 CCDC24Q8N4L8 307 aa8.75□□□□□ -1.01
RNU1-55P-201ENST00000365510 SLC52A2Q9HAB3 445 aa8.75□□□□□ -1.01
RNU1-55P-201ENST00000365510 LGR6Q9HBX8 967 aa8.75□□□□□ -1.01
RNU1-55P-201ENST00000365510 MBIPQ9NS73 344 aa8.75□□□□□ -1.01
RNU1-55P-201ENST00000365510 BTBD11A6QL63 1104 aa8.74□□□□□ -1.01
RNU1-55P-201ENST00000365510 NLGN1Q8N2Q7 840 aa8.74□□□□□ -1.01
RNU1-55P-201ENST00000365510 VIRMAQ69YN4 1812 aaKnown RBP8.74□□□□□ -1.01
RNU1-55P-201ENST00000365510 SIPA1L3O60292 1781 aaPredicted RBP8.73□□□□□ -1.01
RNU1-55P-201ENST00000365510 CICQ96RK0 1608 aaPredicted RBP8.73□□□□□ -1.01
RNU1-55P-201ENST00000365510 TOMM70O94826 608 aa8.73□□□□□ -1.01
RNU1-55P-201ENST00000365510 CRKLP46109 303 aaKnown RBP8.73□□□□□ -1.01
RNU1-55P-201ENST00000365510 TGFB2P61812 414 aa8.73□□□□□ -1.01
RNU1-55P-201ENST00000365510 RASSF7Q02833 373 aa8.73□□□□□ -1.01
RNU1-55P-201ENST00000365510 INTS5Q6P9B9 1019 aaKnown RBP8.73□□□□□ -1.01
RNU1-55P-201ENST00000365510 DNAJC10Q8IXB1 793 aa8.73□□□□□ -1.01
RNU1-55P-201ENST00000365510 ZNF219Q9P2Y4 722 aaPredicted RBP8.73□□□□□ -1.01
RNU1-55P-201ENST00000365510 PARP3Q9Y6F1 533 aa8.73□□□□□ -1.01
RNU1-55P-201ENST00000365510 KIAA1551Q9HCM1 1747 aa8.73□□□□□ -1.01
RNU1-55P-201ENST00000365510 KDM3BQ7LBC6 1761 aa8.73□□□□□ -1.01
RNU1-55P-201ENST00000365510 EXOSC9Q06265 439 aaKnown RBP8.72□□□□□ -1.01
RNU1-55P-201ENST00000365510 USPL1Q5W0Q7 1092 aa8.72□□□□□ -1.01
RNU1-55P-201ENST00000365510 TTC5Q8N0Z6 440 aa8.72□□□□□ -1.01
RNU1-55P-201ENST00000365510 CCDC87Q9NVE4 849 aa8.72□□□□□ -1.01
RNU1-55P-201ENST00000365510 MIS18AQ9NYP9 233 aa8.72□□□□□ -1.01
RNU1-55P-201ENST00000365510 RNF181Q9P0P0 153 aa8.72□□□□□ -1.01
RNU1-55P-201ENST00000365510 RCAN3Q9UKA8 241 aa8.72□□□□□ -1.01
RNU1-55P-201ENST00000365510 SOS1Q07889 1333 aaPredicted RBP8.72□□□□□ -1.01
RNU1-55P-201ENST00000365510 TM4SF1P30408 202 aa8.71□□□□□ -1.02
RNU1-55P-201ENST00000365510 APLP1P51693 650 aa8.71□□□□□ -1.02
RNU1-55P-201ENST00000365510 RC3H1Q5TC82 1133 aaKnown RBP8.71□□□□□ -1.02
RNU1-55P-201ENST00000365510 ZNF790Q6PG37 636 aa8.71□□□□□ -1.02
RNU1-55P-201ENST00000365510 BICDL1Q6ZP65 573 aa8.71□□□□□ -1.02
RNU1-55P-201ENST00000365510 ZNF428Q96B54 188 aa8.71□□□□□ -1.02
RNU1-55P-201ENST00000365510 PIM2Q9P1W9 311 aa8.71□□□□□ -1.02
RNU1-55P-201ENST00000365510 KCPQ6ZWJ8 1503 aa8.7□□□□□ -1.02
RNU1-55P-201ENST00000365510 POLRMTO00411 1230 aaKnown RBP8.7□□□□□ -1.02
RNU1-55P-201ENST00000365510 HOXB7P09629 217 aa8.7□□□□□ -1.02
RNU1-55P-201ENST00000365510 TWISTNBQ3B726 338 aaPredicted RBP8.7□□□□□ -1.02
RNU1-55P-201ENST00000365510 DALRD3Q5D0E6 543 aaKnown RBP8.7□□□□□ -1.02
RNU1-55P-201ENST00000365510 CHMP4AQ9BY43 222 aa8.7□□□□□ -1.02
RNU1-55P-201ENST00000365510 BCL2L12Q9HB09 334 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms