RNA–Protein interactions for RNA: ENST00000364351.1

RNU4-40P-201, Transcript of RNA, U4 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU4-40P, Length 143 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-40P-201ENST00000364351 ATXN7O15265 892 aaPredicted RBP10.72□□□□□ -0.69
RNU4-40P-201ENST00000364351 PROCP04070 461 aa10.72□□□□□ -0.69
RNU4-40P-201ENST00000364351 CABP1Q9NZU7 370 aa10.72□□□□□ -0.69
RNU4-40P-201ENST00000364351 DCDC2BA2VCK2 349 aa10.71□□□□□ -0.69
RNU4-40P-201ENST00000364351 A6NJY4 79 aa10.71□□□□□ -0.69
RNU4-40P-201ENST00000364351 NEURL1BA8MQ27 555 aa10.71□□□□□ -0.69
RNU4-40P-201ENST00000364351 CDK2AP1O14519 115 aa10.71□□□□□ -0.69
RNU4-40P-201ENST00000364351 COL8A1P27658 744 aa10.71□□□□□ -0.69
RNU4-40P-201ENST00000364351 NBPF1Q3BBV0 1214 aa10.71□□□□□ -0.69
RNU4-40P-201ENST00000364351 BTBD6Q96KE9 485 aa10.71□□□□□ -0.69
RNU4-40P-201ENST00000364351 SLC4A9Q96Q91 983 aa10.71□□□□□ -0.69
RNU4-40P-201ENST00000364351 USP3Q9Y6I4 520 aa10.71□□□□□ -0.69
RNU4-40P-201ENST00000364351 ARAFP10398 606 aa10.7□□□□□ -0.7
RNU4-40P-201ENST00000364351 TATP17735 454 aaPredicted RBP10.7□□□□□ -0.7
RNU4-40P-201ENST00000364351 GRIN2CQ14957 1233 aa10.7□□□□□ -0.7
RNU4-40P-201ENST00000364351 LINC00114Q6XXX2 140 aa10.7□□□□□ -0.7
RNU4-40P-201ENST00000364351 PCDHGA11Q9Y5H2 935 aa10.7□□□□□ -0.7
RNU4-40P-201ENST00000364351 KHNYNO15037 678 aaKnown RBP10.69□□□□□ -0.7
RNU4-40P-201ENST00000364351 ADAM23O75077 832 aa10.69□□□□□ -0.7
RNU4-40P-201ENST00000364351 MAPTP10636 758 aaKnown RBP10.69□□□□□ -0.7
RNU4-40P-201ENST00000364351 EPXP11678 715 aa10.69□□□□□ -0.7
RNU4-40P-201ENST00000364351 SKIP12755 728 aa10.69□□□□□ -0.7
RNU4-40P-201ENST00000364351 MTFR1Q15390 333 aa10.69□□□□□ -0.7
RNU4-40P-201ENST00000364351 EML3Q32P44 896 aa10.69□□□□□ -0.7
RNU4-40P-201ENST00000364351 SUV39H2Q9H5I1 410 aa10.69□□□□□ -0.7
RNU4-40P-201ENST00000364351 IQSEC3Q9UPP2 1182 aaPredicted RBP10.69□□□□□ -0.7
RNU4-40P-201ENST00000364351 COG6Q9Y2V7 657 aa10.69□□□□□ -0.7
RNU4-40P-201ENST00000364351 HOXB4P17483 251 aaPredicted RBP10.68□□□□□ -0.7
RNU4-40P-201ENST00000364351 CD33P20138 364 aa10.68□□□□□ -0.7
RNU4-40P-201ENST00000364351 TNP2Q05952 138 aa10.68□□□□□ -0.7
RNU4-40P-201ENST00000364351 ZNF295-AS1Q8N0V1 137 aa10.68□□□□□ -0.7
RNU4-40P-201ENST00000364351 PARP3Q9Y6F1 533 aa10.68□□□□□ -0.7
RNU4-40P-201ENST00000364351 GJA3Q9Y6H8 435 aa10.68□□□□□ -0.7
RNU4-40P-201ENST00000364351 ALYREFQ86V81 257 aaKnown RBP10.67□□□□□ -0.7
RNU4-40P-201ENST00000364351 ZIC5Q96T25 663 aa10.67□□□□□ -0.7
RNU4-40P-201ENST00000364351 ZDHHC3Q9NYG2 299 aa10.67□□□□□ -0.7
RNU4-40P-201ENST00000364351 HCN2Q9UL51 889 aa10.67□□□□□ -0.7
RNU4-40P-201ENST00000364351 NOD1Q9Y239 953 aa10.67□□□□□ -0.7
RNU4-40P-201ENST00000364351 PSME1Q06323 249 aa10.66□□□□□ -0.7
RNU4-40P-201ENST00000364351 BICDL1Q6ZP65 573 aa10.66□□□□□ -0.7
RNU4-40P-201ENST00000364351 PIK3R2O00459 728 aa10.65□□□□□ -0.7
RNU4-40P-201ENST00000364351 GNB5O14775 395 aa10.65□□□□□ -0.7
RNU4-40P-201ENST00000364351 BACH1O14867 736 aa10.65□□□□□ -0.7
RNU4-40P-201ENST00000364351 GTF2IP78347 998 aa10.65□□□□□ -0.7
RNU4-40P-201ENST00000364351 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.65□□□□□ -0.7
RNU4-40P-201ENST00000364351 ADH6P28332 368 aa10.64□□□□□ -0.71
RNU4-40P-201ENST00000364351 FAM182BQ5T319 152 aa10.64□□□□□ -0.71
RNU4-40P-201ENST00000364351 ALG2Q9H553 416 aa10.64□□□□□ -0.71
RNU4-40P-201ENST00000364351 KLF15Q9UIH9 416 aa10.64□□□□□ -0.71
RNU4-40P-201ENST00000364351 BAG6P46379 1132 aa10.63□□□□□ -0.71
RNU4-40P-201ENST00000364351 NCOA4Q13772 614 aa10.63□□□□□ -0.71
RNU4-40P-201ENST00000364351 CHSY3Q70JA7 882 aa10.63□□□□□ -0.71
RNU4-40P-201ENST00000364351 WWC1Q8IX03 1113 aa10.63□□□□□ -0.71
RNU4-40P-201ENST00000364351 PRR12Q9ULL5 1215 aa10.63□□□□□ -0.71
RNU4-40P-201ENST00000364351 LZTS3O60299 673 aaPredicted RBP10.62□□□□□ -0.71
RNU4-40P-201ENST00000364351 TXLNAP40222 546 aa10.62□□□□□ -0.71
RNU4-40P-201ENST00000364351 DGKGP49619 791 aa10.62□□□□□ -0.71
RNU4-40P-201ENST00000364351 PCBP4P57723 403 aaKnown RBP10.62□□□□□ -0.71
RNU4-40P-201ENST00000364351 DEPDC4Q8N2C3 294 aa10.62□□□□□ -0.71
RNU4-40P-201ENST00000364351 ZNF358Q9NW07 568 aa10.62□□□□□ -0.71
RNU4-40P-201ENST00000364351 FAM157BP0CG42 384 aa10.61□□□□□ -0.71
RNU4-40P-201ENST00000364351 FCHSD1Q86WN1 690 aa10.61□□□□□ -0.71
RNU4-40P-201ENST00000364351 POM121Q96HA1 1249 aa10.61□□□□□ -0.71
RNU4-40P-201ENST00000364351 SCHIP1Q9P0W5 487 aaPredicted RBP10.61□□□□□ -0.71
RNU4-40P-201ENST00000364351 K7ELQ4 463 aaPredicted RBP10.6□□□□□ -0.71
RNU4-40P-201ENST00000364351 NFATC2IPQ8NCF5 419 aa10.6□□□□□ -0.71
RNU4-40P-201ENST00000364351 ZDHHC1Q8WTX9 485 aa10.6□□□□□ -0.71
RNU4-40P-201ENST00000364351 L3MBTL2Q969R5 705 aa10.6□□□□□ -0.71
RNU4-40P-201ENST00000364351 AVENQ9NQS1 362 aaPredicted RBP10.6□□□□□ -0.71
RNU4-40P-201ENST00000364351 STRN4Q9NRL3 753 aa10.6□□□□□ -0.71
RNU4-40P-201ENST00000364351 MARK1Q9P0L2 795 aa10.6□□□□□ -0.71
RNU4-40P-201ENST00000364351 TBCELQ5QJ74 424 aa10.59□□□□□ -0.71
RNU4-40P-201ENST00000364351 NOP53Q9NZM5 478 aaKnown RBP10.59□□□□□ -0.71
RNU4-40P-201ENST00000364351 USP17L5A8MUK1 530 aa10.58□□□□□ -0.72
RNU4-40P-201ENST00000364351 C1QTNF9BB2RNN3 333 aa10.58□□□□□ -0.72
RNU4-40P-201ENST00000364351 FURINP09958 794 aa10.58□□□□□ -0.72
RNU4-40P-201ENST00000364351 NOS2P35228 1153 aa10.58□□□□□ -0.72
RNU4-40P-201ENST00000364351 SAMD5Q5TGI4 173 aa10.58□□□□□ -0.72
RNU4-40P-201ENST00000364351 LRRC69Q6ZNQ3 347 aa10.58□□□□□ -0.72
RNU4-40P-201ENST00000364351 TNS4Q8IZW8 715 aa10.58□□□□□ -0.72
RNU4-40P-201ENST00000364351 ZNF232Q9UNY5 417 aa10.58□□□□□ -0.72
RNU4-40P-201ENST00000364351 TEAD4Q15561 434 aa10.57□□□□□ -0.72
RNU4-40P-201ENST00000364351 ZNF468Q5VIY5 522 aaPredicted RBP10.57□□□□□ -0.72
RNU4-40P-201ENST00000364351 SLC9A9Q8IVB4 645 aa10.57□□□□□ -0.72
RNU4-40P-201ENST00000364351 NEUROD4Q9HD90 331 aa10.57□□□□□ -0.72
RNU4-40P-201ENST00000364351 RAD21O60216 631 aa10.56□□□□□ -0.72
RNU4-40P-201ENST00000364351 PRKCSHP14314 528 aaPredicted RBP10.56□□□□□ -0.72
RNU4-40P-201ENST00000364351 CD163Q86VB7 1156 aa10.56□□□□□ -0.72
RNU4-40P-201ENST00000364351 EFSO43281 561 aa10.55□□□□□ -0.72
RNU4-40P-201ENST00000364351 LAMC2Q13753 1193 aa10.55□□□□□ -0.72
RNU4-40P-201ENST00000364351 CHRNA4P43681 627 aa10.54□□□□□ -0.72
RNU4-40P-201ENST00000364351 EPHA4P54764 986 aa10.54□□□□□ -0.72
RNU4-40P-201ENST00000364351 TRIM50Q86XT4 487 aa10.54□□□□□ -0.72
RNU4-40P-201ENST00000364351 SERTM1A2A2V5 107 aa10.53□□□□□ -0.72
RNU4-40P-201ENST00000364351 POM121CA8CG34 1229 aa10.53□□□□□ -0.72
RNU4-40P-201ENST00000364351 EML1O00423 815 aa10.53□□□□□ -0.72
RNU4-40P-201ENST00000364351 SH3PXD2AQ5TCZ1 1133 aa10.53□□□□□ -0.72
RNU4-40P-201ENST00000364351 SYT9Q86SS6 491 aa10.53□□□□□ -0.72
RNU4-40P-201ENST00000364351 TPCN2Q8NHX9 752 aa10.53□□□□□ -0.72
RNU4-40P-201ENST00000364351 PLVAPQ9BX97 442 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms