RNA–Protein interactions for RNA: ENST00000363727.1

RNU1-87P-201, Transcript of RNA, U1 small nuclear 87, pseudogene, humanhuman

BASIC

Gene RNU1-87P, Length 170 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-87P-201ENST00000363727 CHMP3Q9Y3E7 222 aa8.11□□□□□ -1.11
RNU1-87P-201ENST00000363727 TTLL8A6PVC2 850 aa8.1□□□□□ -1.11
RNU1-87P-201ENST00000363727 FOXO3O43524 673 aa8.1□□□□□ -1.11
RNU1-87P-201ENST00000363727 RHOQP17081 205 aa8.1□□□□□ -1.11
RNU1-87P-201ENST00000363727 PLA2G4AP47712 749 aa8.1□□□□□ -1.11
RNU1-87P-201ENST00000363727 POU4F2Q12837 409 aa8.1□□□□□ -1.11
RNU1-87P-201ENST00000363727 GNASQ5JWF2 1037 aa8.1□□□□□ -1.11
RNU1-87P-201ENST00000363727 RNF217Q8TC41 542 aa8.1□□□□□ -1.11
RNU1-87P-201ENST00000363727 CCER1Q8TC90 406 aaPredicted RBP8.1□□□□□ -1.11
RNU1-87P-201ENST00000363727 ZDHHC1Q8WTX9 485 aa8.1□□□□□ -1.11
RNU1-87P-201ENST00000363727 ANO2Q9NQ90 1003 aa8.1□□□□□ -1.11
RNU1-87P-201ENST00000363727 PODXL2Q9NZ53 605 aa8.1□□□□□ -1.11
RNU1-87P-201ENST00000363727 HCN4Q9Y3Q4 1203 aa8.1□□□□□ -1.11
RNU1-87P-201ENST00000363727 SERTM1A2A2V5 107 aa8.09□□□□□ -1.11
RNU1-87P-201ENST00000363727 PATL2C9JE40 543 aaKnown RBP8.09□□□□□ -1.11
RNU1-87P-201ENST00000363727 GPC1P35052 558 aa8.09□□□□□ -1.11
RNU1-87P-201ENST00000363727 NOS2P35228 1153 aa8.09□□□□□ -1.11
RNU1-87P-201ENST00000363727 C4orf17Q53FE4 359 aa8.09□□□□□ -1.11
RNU1-87P-201ENST00000363727 TXNDC2Q86VQ3 553 aa8.09□□□□□ -1.11
RNU1-87P-201ENST00000363727 C1orf216Q8TAB5 229 aa8.09□□□□□ -1.11
RNU1-87P-201ENST00000363727 RHBDD1Q8TEB9 315 aa8.09□□□□□ -1.11
RNU1-87P-201ENST00000363727 L3MBTL2Q969R5 705 aa8.09□□□□□ -1.11
RNU1-87P-201ENST00000363727 NIFKQ9BYG3 293 aaKnown RBP8.09□□□□□ -1.11
RNU1-87P-201ENST00000363727 ATP13A2Q9NQ11 1180 aa8.09□□□□□ -1.11
RNU1-87P-201ENST00000363727 ZNF211Q13398 564 aaPredicted RBP8.08□□□□□ -1.12
RNU1-87P-201ENST00000363727 LYSMD3Q7Z3D4 306 aa8.08□□□□□ -1.12
RNU1-87P-201ENST00000363727 CRIPAKQ8N1N5 446 aa8.08□□□□□ -1.12
RNU1-87P-201ENST00000363727 AIDAQ96BJ3 306 aa8.08□□□□□ -1.12
RNU1-87P-201ENST00000363727 C2orf49Q9BVC5 232 aaPredicted RBP8.08□□□□□ -1.12
RNU1-87P-201ENST00000363727 SOS2Q07890 1332 aaPredicted RBP8.07□□□□□ -1.12
RNU1-87P-201ENST00000363727 SOBPA7XYQ1 873 aa8.07□□□□□ -1.12
RNU1-87P-201ENST00000363727 EML1O00423 815 aa8.07□□□□□ -1.12
RNU1-87P-201ENST00000363727 MTMR3Q13615 1198 aa8.07□□□□□ -1.12
RNU1-87P-201ENST00000363727 TEAD4Q15561 434 aa8.07□□□□□ -1.12
RNU1-87P-201ENST00000363727 GTF3C2Q8WUA4 911 aaPredicted RBP8.07□□□□□ -1.12
RNU1-87P-201ENST00000363727 MTMR7Q9Y216 660 aa8.07□□□□□ -1.12
RNU1-87P-201ENST00000363727 PTCD1O75127 700 aaKnown RBP8.06□□□□□ -1.12
RNU1-87P-201ENST00000363727 NBPF10Q6P3W6 841 aaKnown RBP8.06□□□□□ -1.12
RNU1-87P-201ENST00000363727 ZNF295-AS1Q8N0V1 137 aa8.06□□□□□ -1.12
RNU1-87P-201ENST00000363727 SAP130Q9H0E3 1048 aa8.06□□□□□ -1.12
RNU1-87P-201ENST00000363727 DNMT3LQ9UJW3 386 aa8.06□□□□□ -1.12
RNU1-87P-201ENST00000363727 GNEQ9Y223 722 aaKnown RBP8.06□□□□□ -1.12
RNU1-87P-201ENST00000363727 TXLNAP40222 546 aa8.05□□□□□ -1.12
RNU1-87P-201ENST00000363727 Q6ZNB5 142 aa8.05□□□□□ -1.12
RNU1-87P-201ENST00000363727 DNMT3AQ9Y6K1 912 aaPredicted RBP8.05□□□□□ -1.12
RNU1-87P-201ENST00000363727 SPATA31C2B4DYI2 1134 aa8.04□□□□□ -1.12
RNU1-87P-201ENST00000363727 MAN1A2O60476 641 aa8.04□□□□□ -1.12
RNU1-87P-201ENST00000363727 ALDH16A1Q8IZ83 802 aa8.04□□□□□ -1.12
RNU1-87P-201ENST00000363727 STAG2Q8N3U4 1231 aa8.04□□□□□ -1.12
RNU1-87P-201ENST00000363727 PHACTR1Q9C0D0 580 aa8.04□□□□□ -1.12
RNU1-87P-201ENST00000363727 QTRT2Q9H974 415 aaKnown RBP8.04□□□□□ -1.12
RNU1-87P-201ENST00000363727 H3BRB1 525 aa8.03□□□□□ -1.12
RNU1-87P-201ENST00000363727 C16orf46Q6P387 395 aa8.03□□□□□ -1.12
RNU1-87P-201ENST00000363727 COL26A1Q96A83 441 aa8.03□□□□□ -1.12
RNU1-87P-201ENST00000363727 TUT1Q9H6E5 874 aaKnown RBP8.03□□□□□ -1.12
RNU1-87P-201ENST00000363727 TIMMDC1Q9NPL8 285 aa8.03□□□□□ -1.12
RNU1-87P-201ENST00000363727 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.03□□□□□ -1.12
RNU1-87P-201ENST00000363727 BIN2Q9UBW5 565 aaPredicted RBP8.03□□□□□ -1.12
RNU1-87P-201ENST00000363727 NBPF1Q3BBV0 1214 aa8.02□□□□□ -1.13
RNU1-87P-201ENST00000363727 COX20Q5RI15 118 aa8.02□□□□□ -1.13
RNU1-87P-201ENST00000363727 GMPR2Q9P2T1 348 aaKnown RBP8.02□□□□□ -1.13
RNU1-87P-201ENST00000363727 SOWAHDA6NJG2 315 aa8.01□□□□□ -1.13
RNU1-87P-201ENST00000363727 DGKZQ13574 1117 aa8.01□□□□□ -1.13
RNU1-87P-201ENST00000363727 GLYCTKQ8IVS8 523 aa8.01□□□□□ -1.13
RNU1-87P-201ENST00000363727 GAS2L1Q99501 681 aaPredicted RBP8.01□□□□□ -1.13
RNU1-87P-201ENST00000363727 GPAMQ9HCL2 828 aa8.01□□□□□ -1.13
RNU1-87P-201ENST00000363727 KLK14Q9P0G3 267 aa8.01□□□□□ -1.13
RNU1-87P-201ENST00000363727 LRFN2Q9ULH4 789 aa8.01□□□□□ -1.13
RNU1-87P-201ENST00000363727 TATP17735 454 aaPredicted RBP8□□□□□ -1.13
RNU1-87P-201ENST00000363727 HIRAP54198 1017 aaPredicted RBP8□□□□□ -1.13
RNU1-87P-201ENST00000363727 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8□□□□□ -1.13
RNU1-87P-201ENST00000363727 TMCO4Q5TGY1 634 aa8□□□□□ -1.13
RNU1-87P-201ENST00000363727 POTEAQ6S8J7 498 aa8□□□□□ -1.13
RNU1-87P-201ENST00000363727 BICDL1Q6ZP65 573 aa8□□□□□ -1.13
RNU1-87P-201ENST00000363727 RHPN1Q8TCX5 695 aa8□□□□□ -1.13
RNU1-87P-201ENST00000363727 HELQQ8TDG4 1101 aa8□□□□□ -1.13
RNU1-87P-201ENST00000363727 KLRG1Q96E93 195 aa8□□□□□ -1.13
RNU1-87P-201ENST00000363727 ICMTO60725 284 aa7.99□□□□□ -1.13
RNU1-87P-201ENST00000363727 MSX1P28360 303 aa7.99□□□□□ -1.13
RNU1-87P-201ENST00000363727 RTN1Q16799 776 aa7.99□□□□□ -1.13
RNU1-87P-201ENST00000363727 ARSJQ5FYB0 599 aaPredicted RBP7.99□□□□□ -1.13
RNU1-87P-201ENST00000363727 SND1Q7KZF4 910 aaKnown RBP eCLIP7.99□□□□□ -1.13
RNU1-87P-201ENST00000363727 LCE2BO14633 110 aa7.98□□□□□ -1.13
RNU1-87P-201ENST00000363727 FKBP4Q02790 459 aaKnown RBP eCLIP7.98□□□□□ -1.13
RNU1-87P-201ENST00000363727 SENP2Q9HC62 589 aa7.98□□□□□ -1.13
RNU1-87P-201ENST00000363727 EGFL7Q9UHF1 273 aa7.98□□□□□ -1.13
RNU1-87P-201ENST00000363727 A0A1B0GTH6 734 aa7.97□□□□□ -1.13
RNU1-87P-201ENST00000363727 TNFRSF10BO14763 440 aa7.97□□□□□ -1.13
RNU1-87P-201ENST00000363727 SNRPBP14678 240 aaKnown RBP7.97□□□□□ -1.13
RNU1-87P-201ENST00000363727 ATP4AP20648 1035 aa7.97□□□□□ -1.13
RNU1-87P-201ENST00000363727 MPSTP25325 297 aa7.97□□□□□ -1.13
RNU1-87P-201ENST00000363727 WDR44Q5JSH3 913 aa7.97□□□□□ -1.13
RNU1-87P-201ENST00000363727 FAM26DQ5JW98 314 aa7.97□□□□□ -1.13
RNU1-87P-201ENST00000363727 C1orf53Q5VUE5 145 aa7.97□□□□□ -1.13
RNU1-87P-201ENST00000363727 MYO19Q96H55 970 aa7.97□□□□□ -1.13
RNU1-87P-201ENST00000363727 HSH2DQ96JZ2 352 aa7.97□□□□□ -1.13
RNU1-87P-201ENST00000363727 TRIM47Q96LD4 638 aa7.97□□□□□ -1.13
RNU1-87P-201ENST00000363727 RUBCNLQ9H714 662 aa7.97□□□□□ -1.13
RNU1-87P-201ENST00000363727 ZDHHC3Q9NYG2 299 aa7.97□□□□□ -1.13
RNU1-87P-201ENST00000363727 SENP3-EIF4A1A0A087X0R7 540 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms