RNA–Protein interactions for RNA: ENST00000361530.10

CNKSR1-201, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,625 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-201ENST00000361530 RBM33Q96EV2 1170 aaKnown RBP18.92■□□□□ 0.62
CNKSR1-201ENST00000361530 NBPF4Q96M43 638 aa18.92■□□□□ 0.62
CNKSR1-201ENST00000361530 PXDNLA1KZ92 1463 aa18.91■□□□□ 0.62
CNKSR1-201ENST00000361530 MCM2P49736 904 aa18.91■□□□□ 0.62
CNKSR1-201ENST00000361530 RBSNQ9H1K0 784 aa18.91■□□□□ 0.62
CNKSR1-201ENST00000361530 PRIM1P49642 420 aaKnown RBP18.91■□□□□ 0.62
CNKSR1-201ENST00000361530 EIF4A1P60842 406 aaKnown RBP18.91■□□□□ 0.62
CNKSR1-201ENST00000361530 POLA2Q14181 598 aa18.91■□□□□ 0.62
CNKSR1-201ENST00000361530 CEMIPQ8WUJ3 1361 aa18.91■□□□□ 0.62
CNKSR1-201ENST00000361530 BRD1O95696 1058 aa18.9■□□□□ 0.62
CNKSR1-201ENST00000361530 ANXA1P04083 346 aa18.9■□□□□ 0.62
CNKSR1-201ENST00000361530 RHPN1Q8TCX5 695 aa18.9■□□□□ 0.62
CNKSR1-201ENST00000361530 TMEM63CQ9P1W3 806 aa18.9■□□□□ 0.62
CNKSR1-201ENST00000361530 CHPF2Q9P2E5 772 aa18.9■□□□□ 0.62
CNKSR1-201ENST00000361530 SRGAP3O43295 1099 aa18.89■□□□□ 0.62
CNKSR1-201ENST00000361530 PI4K2BQ8TCG2 481 aa18.89■□□□□ 0.62
CNKSR1-201ENST00000361530 IP6K1Q92551 441 aa18.89■□□□□ 0.62
CNKSR1-201ENST00000361530 RRP9O43818 475 aaKnown RBP18.89■□□□□ 0.61
CNKSR1-201ENST00000361530 PHF8Q9UPP1 1060 aa18.89■□□□□ 0.61
CNKSR1-201ENST00000361530 AOX1Q06278 1338 aa18.89■□□□□ 0.61
CNKSR1-201ENST00000361530 PI4KAP2A4QPH2 592 aa18.88■□□□□ 0.61
CNKSR1-201ENST00000361530 PI4KAP1Q8N8J0 262 aa18.88■□□□□ 0.61
CNKSR1-201ENST00000361530 IL17RAQ96F46 866 aa18.88■□□□□ 0.61
CNKSR1-201ENST00000361530 RAB11FIP3O75154 756 aa18.88■□□□□ 0.61
CNKSR1-201ENST00000361530 BEND3Q5T5X7 828 aa18.88■□□□□ 0.61
CNKSR1-201ENST00000361530 N4BP2Q86UW6 1770 aaPredicted RBP18.88■□□□□ 0.61
CNKSR1-201ENST00000361530 A0A0U1RQG5 324 aaPredicted RBP18.87■□□□□ 0.61
CNKSR1-201ENST00000361530 ZBTB7CA1YPR0 619 aa18.87■□□□□ 0.61
CNKSR1-201ENST00000361530 SETD1BQ9UPS6 1966 aaKnown RBP18.87■□□□□ 0.61
CNKSR1-201ENST00000361530 INTS4Q96HW7 963 aaKnown RBP18.87■□□□□ 0.61
CNKSR1-201ENST00000361530 HSPA4P34932 840 aa18.87■□□□□ 0.61
CNKSR1-201ENST00000361530 DNAAF4Q8WXU2 420 aa18.87■□□□□ 0.61
CNKSR1-201ENST00000361530 ANP32BQ92688 251 aaKnown RBP18.87■□□□□ 0.61
CNKSR1-201ENST00000361530 LRRC59Q96AG4 307 aaKnown RBP18.86■□□□□ 0.61
CNKSR1-201ENST00000361530 USP54Q70EL1 1684 aa18.86■□□□□ 0.61
CNKSR1-201ENST00000361530 SYCE3A1L190 88 aa18.85■□□□□ 0.61
CNKSR1-201ENST00000361530 FOXD4L6Q3SYB3 417 aaPredicted RBP18.85■□□□□ 0.61
CNKSR1-201ENST00000361530 FOXD4L3Q6VB84 417 aaPredicted RBP18.85■□□□□ 0.61
CNKSR1-201ENST00000361530 MPRIPQ6WCQ1 1025 aa18.85■□□□□ 0.61
CNKSR1-201ENST00000361530 KIF1BPQ96EK5 621 aa18.85■□□□□ 0.61
CNKSR1-201ENST00000361530 SGSM2O43147 1006 aa18.84■□□□□ 0.61
CNKSR1-201ENST00000361530 LTN1O94822 1766 aa18.84■□□□□ 0.61
CNKSR1-201ENST00000361530 BTBD11A6QL63 1104 aa18.83■□□□□ 0.6
CNKSR1-201ENST00000361530 ADCY9O60503 1353 aa18.83■□□□□ 0.6
CNKSR1-201ENST00000361530 LRSAM1Q6UWE0 723 aa18.83■□□□□ 0.6
CNKSR1-201ENST00000361530 MED1Q15648 1581 aaPredicted RBP18.82■□□□□ 0.6
CNKSR1-201ENST00000361530 HOXB7P09629 217 aa18.82■□□□□ 0.6
CNKSR1-201ENST00000361530 PDE4CQ08493 712 aa18.82■□□□□ 0.6
CNKSR1-201ENST00000361530 ZNF530Q6P9A1 599 aaPredicted RBP18.82■□□□□ 0.6
CNKSR1-201ENST00000361530 ZSCAN30Q86W11 494 aa18.82■□□□□ 0.6
CNKSR1-201ENST00000361530 RASEFQ8IZ41 740 aa18.82■□□□□ 0.6
CNKSR1-201ENST00000361530 SNX14Q9Y5W7 946 aa18.82■□□□□ 0.6
CNKSR1-201ENST00000361530 NFAT5O94916 1531 aa18.82■□□□□ 0.6
CNKSR1-201ENST00000361530 RAD50Q92878 1312 aa18.82■□□□□ 0.6
CNKSR1-201ENST00000361530 FGD1P98174 961 aa18.82■□□□□ 0.6
CNKSR1-201ENST00000361530 TEFQ10587 303 aa18.82■□□□□ 0.6
CNKSR1-201ENST00000361530 LSG1Q9H089 658 aaKnown RBP18.82■□□□□ 0.6
CNKSR1-201ENST00000361530 FER1L4A9Z1Z3 1794 aa18.81■□□□□ 0.6
CNKSR1-201ENST00000361530 LARP6Q9BRS8 491 aaKnown RBP18.81■□□□□ 0.6
CNKSR1-201ENST00000361530 GDPD2Q9HCC8 539 aa18.81■□□□□ 0.6
CNKSR1-201ENST00000361530 EPB41L2O43491 1005 aaKnown RBP18.81■□□□□ 0.6
CNKSR1-201ENST00000361530 PSME1Q06323 249 aa18.81■□□□□ 0.6
CNKSR1-201ENST00000361530 CWC27Q6UX04 472 aaKnown RBP18.81■□□□□ 0.6
CNKSR1-201ENST00000361530 PDLIM2Q96JY6 352 aa18.81■□□□□ 0.6
CNKSR1-201ENST00000361530 ESCO1Q5FWF5 840 aa18.8■□□□□ 0.6
CNKSR1-201ENST00000361530 AKAP4Q5JQC9 854 aa18.8■□□□□ 0.6
CNKSR1-201ENST00000361530 SPG7Q9UQ90 795 aa18.8■□□□□ 0.6
CNKSR1-201ENST00000361530 MBD3O95983 291 aa18.8■□□□□ 0.6
CNKSR1-201ENST00000361530 PROSER3Q2NL68 480 aa18.8■□□□□ 0.6
CNKSR1-201ENST00000361530 GADD45BO75293 160 aaPredicted RBP18.79■□□□□ 0.6
CNKSR1-201ENST00000361530 CNTROBQ8N137 903 aa18.79■□□□□ 0.6
CNKSR1-201ENST00000361530 RGPD2P0DJD1 1756 aa18.79■□□□□ 0.6
CNKSR1-201ENST00000361530 KDM3BQ7LBC6 1761 aa18.79■□□□□ 0.6
CNKSR1-201ENST00000361530 TTC14Q96N46 770 aa18.79■□□□□ 0.6
CNKSR1-201ENST00000361530 PRAMEF22A3QJZ6 481 aa18.78■□□□□ 0.6
CNKSR1-201ENST00000361530 KIAA1211Q6ZU35 1233 aa18.78■□□□□ 0.6
CNKSR1-201ENST00000361530 RBM10P98175 930 aaKnown RBP18.78■□□□□ 0.6
CNKSR1-201ENST00000361530 OS9Q13438 667 aaPredicted RBP18.78■□□□□ 0.6
CNKSR1-201ENST00000361530 MAP3K2Q9Y2U5 619 aa18.78■□□□□ 0.6
CNKSR1-201ENST00000361530 CPA1P15085 419 aa18.77■□□□□ 0.6
CNKSR1-201ENST00000361530 PLEKHO1Q53GL0 409 aaPredicted RBP18.77■□□□□ 0.6
CNKSR1-201ENST00000361530 PA2G4Q9UQ80 394 aaKnown RBP18.77■□□□□ 0.6
CNKSR1-201ENST00000361530 RNMTO43148 476 aaKnown RBP18.77■□□□□ 0.6
CNKSR1-201ENST00000361530 TPM2P07951 284 aa18.77■□□□□ 0.6
CNKSR1-201ENST00000361530 MSNP26038 577 aaKnown RBP18.77■□□□□ 0.6
CNKSR1-201ENST00000361530 AK2P54819 239 aa18.77■□□□□ 0.6
CNKSR1-201ENST00000361530 RNF214Q8ND24 703 aa18.77■□□□□ 0.6
CNKSR1-201ENST00000361530 DBF4Q9UBU7 674 aaPredicted RBP18.77■□□□□ 0.6
CNKSR1-201ENST00000361530 USP42Q9H9J4 1324 aaKnown RBP18.77■□□□□ 0.59
CNKSR1-201ENST00000361530 RPAP1Q9BWH6 1393 aaPredicted RBP18.76■□□□□ 0.59
CNKSR1-201ENST00000361530 XPCQ01831 940 aaPredicted RBP18.76■□□□□ 0.59
CNKSR1-201ENST00000361530 HSP90AB4PQ58FF6 505 aa18.76■□□□□ 0.59
CNKSR1-201ENST00000361530 RUFY3Q7L099 469 aa18.76■□□□□ 0.59
CNKSR1-201ENST00000361530 USP48Q86UV5 1035 aa18.76■□□□□ 0.59
CNKSR1-201ENST00000361530 KCNH5Q8NCM2 988 aa18.76■□□□□ 0.59
CNKSR1-201ENST00000361530 WDR33Q9C0J8 1336 aaKnown RBP18.76■□□□□ 0.59
CNKSR1-201ENST00000361530 PXDNQ92626 1479 aa18.76■□□□□ 0.59
CNKSR1-201ENST00000361530 MTX1Q13505 466 aa18.76■□□□□ 0.59
CNKSR1-201ENST00000361530 CWF19L2Q2TBE0 894 aaKnown RBP18.76■□□□□ 0.59
CNKSR1-201ENST00000361530 GIGYF1O75420 1035 aaPredicted RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms