RNA–Protein interactions for RNA: ENST00000361354.8

NCKAP1-202, Transcript of NCK associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCKAP1, Length 20,347 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-202ENST00000361354 PPFIBP2Q8ND30 876 aa9.69□□□□□ -0.86
NCKAP1-202ENST00000361354 LIG1P18858 919 aa9.68□□□□□ -0.86
NCKAP1-202ENST00000361354 CCDC96Q2M329 555 aa9.68□□□□□ -0.86
NCKAP1-202ENST00000361354 PRKRIP1Q9H875 184 aaPredicted RBP9.68□□□□□ -0.86
NCKAP1-202ENST00000361354 BLOC1S2Q6QNY1 142 aa9.68□□□□□ -0.86
NCKAP1-202ENST00000361354 PRR16Q569H4 304 aa9.68□□□□□ -0.86
NCKAP1-202ENST00000361354 STX1AQ16623 288 aa9.68□□□□□ -0.86
NCKAP1-202ENST00000361354 ZMAT2Q96NC0 199 aaKnown RBP9.68□□□□□ -0.86
NCKAP1-202ENST00000361354 KLHL10Q6JEL2 608 aa9.68□□□□□ -0.86
NCKAP1-202ENST00000361354 CCDC129Q6ZRS4 1044 aa9.68□□□□□ -0.86
NCKAP1-202ENST00000361354 NDC80O14777 642 aa9.68□□□□□ -0.86
NCKAP1-202ENST00000361354 CCDC172P0C7W6 258 aa9.68□□□□□ -0.86
NCKAP1-202ENST00000361354 IFT74Q96LB3 600 aa9.68□□□□□ -0.86
NCKAP1-202ENST00000361354 NUF2Q9BZD4 464 aa9.68□□□□□ -0.86
NCKAP1-202ENST00000361354 TTC21AQ8NDW8 1320 aa9.68□□□□□ -0.86
NCKAP1-202ENST00000361354 APAF1O14727 1248 aa9.67□□□□□ -0.86
NCKAP1-202ENST00000361354 SATB1Q01826 763 aa9.67□□□□□ -0.86
NCKAP1-202ENST00000361354 CTNNA3Q9UI47 895 aa9.67□□□□□ -0.86
NCKAP1-202ENST00000361354 VCXQ9H320 206 aa9.67□□□□□ -0.86
NCKAP1-202ENST00000361354 CCDC14Q49A88 953 aa9.67□□□□□ -0.86
NCKAP1-202ENST00000361354 WDR63Q8IWG1 891 aa9.67□□□□□ -0.86
NCKAP1-202ENST00000361354 PRC1O43663 620 aa9.67□□□□□ -0.86
NCKAP1-202ENST00000361354 OTUD6BQ8N6M0 293 aa9.67□□□□□ -0.86
NCKAP1-202ENST00000361354 ALDH3A1P30838 453 aa9.67□□□□□ -0.86
NCKAP1-202ENST00000361354 SCAND2PQ9GZW5 306 aaPredicted RBP9.67□□□□□ -0.86
NCKAP1-202ENST00000361354 ATP2A1O14983 1001 aa9.67□□□□□ -0.86
NCKAP1-202ENST00000361354 GBP1P32455 592 aa9.67□□□□□ -0.86
NCKAP1-202ENST00000361354 TUBB4BP68371 445 aa9.67□□□□□ -0.86
NCKAP1-202ENST00000361354 CAVIN2O95810 425 aa9.67□□□□□ -0.86
NCKAP1-202ENST00000361354 MVPQ14764 893 aaKnown RBP9.67□□□□□ -0.86
NCKAP1-202ENST00000361354 TSNAXIP1Q2TAA8 658 aa9.67□□□□□ -0.86
NCKAP1-202ENST00000361354 PANK1Q8TE04 598 aa9.67□□□□□ -0.86
NCKAP1-202ENST00000361354 SURF6O75683 361 aaKnown RBP9.67□□□□□ -0.86
NCKAP1-202ENST00000361354 CCDC12Q8WUD4 166 aaPredicted RBP9.67□□□□□ -0.86
NCKAP1-202ENST00000361354 SETDB1Q15047 1291 aa9.67□□□□□ -0.86
NCKAP1-202ENST00000361354 TMEM266Q2M3C6 531 aa9.67□□□□□ -0.86
NCKAP1-202ENST00000361354 MCM4P33991 863 aa9.67□□□□□ -0.86
NCKAP1-202ENST00000361354 UBA5Q9GZZ9 404 aa9.67□□□□□ -0.86
NCKAP1-202ENST00000361354 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.67□□□□□ -0.86
NCKAP1-202ENST00000361354 FLIIQ13045 1269 aa9.66□□□□□ -0.86
NCKAP1-202ENST00000361354 ATRIPQ8WXE1 791 aa9.66□□□□□ -0.86
NCKAP1-202ENST00000361354 PRPHP41219 470 aa9.66□□□□□ -0.86
NCKAP1-202ENST00000361354 KIAA1524Q8TCG1 905 aa9.66□□□□□ -0.86
NCKAP1-202ENST00000361354 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.66□□□□□ -0.861e-6■□□□□ 11.1
NCKAP1-202ENST00000361354 RASSF4Q9H2L5 321 aa9.66□□□□□ -0.86
NCKAP1-202ENST00000361354 WHAMMQ8TF30 809 aa9.66□□□□□ -0.86
NCKAP1-202ENST00000361354 PDE1CQ14123 709 aaPredicted RBP9.66□□□□□ -0.86
NCKAP1-202ENST00000361354 KLHL34Q8N239 644 aa9.66□□□□□ -0.86
NCKAP1-202ENST00000361354 SF3B2Q13435 895 aaKnown RBP9.66□□□□□ -0.86
NCKAP1-202ENST00000361354 RGS22Q8NE09 1264 aa9.66□□□□□ -0.86
NCKAP1-202ENST00000361354 TRIM7Q9C029 511 aa9.66□□□□□ -0.86
NCKAP1-202ENST00000361354 PDRG1Q9NUG6 133 aa9.66□□□□□ -0.86
NCKAP1-202ENST00000361354 CCDC30Q5VVM6 783 aa9.66□□□□□ -0.86
NCKAP1-202ENST00000361354 CCDC50Q8IVM0 306 aa9.66□□□□□ -0.86
NCKAP1-202ENST00000361354 C10orf67Q8IYJ2 551 aa9.66□□□□□ -0.86
NCKAP1-202ENST00000361354 DCAF8L1A6NGE4 600 aa9.66□□□□□ -0.86
NCKAP1-202ENST00000361354 MGEA5O60502 916 aa9.66□□□□□ -0.86
NCKAP1-202ENST00000361354 CAPN2P17655 700 aa9.66□□□□□ -0.86
NCKAP1-202ENST00000361354 CCDC144CPQ8IYA2 1237 aa9.66□□□□□ -0.86
NCKAP1-202ENST00000361354 SPDYE4A6NLX3 237 aa9.66□□□□□ -0.86
NCKAP1-202ENST00000361354 GNAI2P04899 355 aa9.66□□□□□ -0.86
NCKAP1-202ENST00000361354 CNGA1P29973 690 aa9.66□□□□□ -0.86
NCKAP1-202ENST00000361354 SNX16P57768 344 aa9.66□□□□□ -0.86
NCKAP1-202ENST00000361354 CCDC114Q96M63 670 aa9.66□□□□□ -0.86
NCKAP1-202ENST00000361354 TSPYL2Q9H2G4 693 aaPredicted RBP9.66□□□□□ -0.86
NCKAP1-202ENST00000361354 ZNF287Q9HBT7 754 aa9.65□□□□□ -0.86
NCKAP1-202ENST00000361354 CAMK4Q16566 473 aa9.65□□□□□ -0.86
NCKAP1-202ENST00000361354 JAKMIP2Q96AA8 810 aa9.65□□□□□ -0.86
NCKAP1-202ENST00000361354 CASTP20810 708 aaKnown RBP9.65□□□□□ -0.86
NCKAP1-202ENST00000361354 XPCQ01831 940 aaPredicted RBP9.65□□□□□ -0.86
NCKAP1-202ENST00000361354 MAP7Q14244 749 aa9.65□□□□□ -0.86
NCKAP1-202ENST00000361354 CFAP157Q5JU67 520 aa9.65□□□□□ -0.86
NCKAP1-202ENST00000361354 CFAP65Q6ZU64 1925 aaKnown RBP9.65□□□□□ -0.86
NCKAP1-202ENST00000361354 TRAK1Q9UPV9 953 aa9.65□□□□□ -0.86
NCKAP1-202ENST00000361354 NOP2P46087 812 aaKnown RBP9.65□□□□□ -0.86
NCKAP1-202ENST00000361354 ERCC6LQ2NKX8 1250 aa9.65□□□□□ -0.86
NCKAP1-202ENST00000361354 WHAMMP3Q1A5X7 153 aa9.65□□□□□ -0.87
NCKAP1-202ENST00000361354 CCDC63Q8NA47 563 aa9.65□□□□□ -0.87
NCKAP1-202ENST00000361354 SELENOOQ9BVL4 669 aa9.65□□□□□ -0.87
NCKAP1-202ENST00000361354 BUB1BO60566 1050 aaPredicted RBP9.65□□□□□ -0.87
NCKAP1-202ENST00000361354 CEP128Q6ZU80 1094 aa9.65□□□□□ -0.87
NCKAP1-202ENST00000361354 SRRTQ9BXP5 876 aaKnown RBP9.65□□□□□ -0.87
NCKAP1-202ENST00000361354 ST20-MTHFSA0A0A6YYL1 179 aa9.65□□□□□ -0.87
NCKAP1-202ENST00000361354 ERCC3P19447 782 aa9.65□□□□□ -0.87
NCKAP1-202ENST00000361354 CCDC170Q8IYT3 715 aa9.64□□□□□ -0.87
NCKAP1-202ENST00000361354 SH3BP5O60239 455 aa9.64□□□□□ -0.87
NCKAP1-202ENST00000361354 PCK1P35558 622 aa9.64□□□□□ -0.87
NCKAP1-202ENST00000361354 TRHP20396 242 aaPredicted RBP9.64□□□□□ -0.87
NCKAP1-202ENST00000361354 RAPGEF4Q8WZA2 1011 aa9.64□□□□□ -0.87
NCKAP1-202ENST00000361354 CCDC7Q96M83 1385 aa9.64□□□□□ -0.87
NCKAP1-202ENST00000361354 STXBP4Q6ZWJ1 553 aa9.64□□□□□ -0.87
NCKAP1-202ENST00000361354 ZNF365Q70YC5 407 aa9.64□□□□□ -0.87
NCKAP1-202ENST00000361354 TMEM87AQ8NBN3 555 aa9.64□□□□□ -0.87
NCKAP1-202ENST00000361354 WASHC2CQ9Y4E1 1318 aa9.64□□□□□ -0.87
NCKAP1-202ENST00000361354 PYM1Q9BRP8 204 aaKnown RBP9.64□□□□□ -0.87
NCKAP1-202ENST00000361354 CNNM1Q9NRU3 951 aa9.64□□□□□ -0.87
NCKAP1-202ENST00000361354 ATP2A2P16615 1042 aaKnown RBP9.64□□□□□ -0.87
NCKAP1-202ENST00000361354 MCM6Q14566 821 aa9.64□□□□□ -0.87
NCKAP1-202ENST00000361354 PHLDB2Q86SQ0 1253 aa9.64□□□□□ -0.87
NCKAP1-202ENST00000361354 CTAGE6Q86UF2 777 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms