RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 SPTY2D1Q68D10 685 aaPredicted RBP23.74■■□□□ 1.39
CDC42BPB-201ENST00000361246 NLRP5P59047 1200 aa23.74■■□□□ 1.39
CDC42BPB-201ENST00000361246 TFCP2L1Q9NZI6 479 aa23.74■■□□□ 1.39
CDC42BPB-201ENST00000361246 MSH6P52701 1360 aa23.74■■□□□ 1.39
CDC42BPB-201ENST00000361246 MCM2P49736 904 aa23.73■■□□□ 1.39
CDC42BPB-201ENST00000361246 KIF1BPQ96EK5 621 aa23.73■■□□□ 1.39
CDC42BPB-201ENST00000361246 VEZTQ9HBM0 779 aa23.73■■□□□ 1.39
CDC42BPB-201ENST00000361246 K7ELQ4 463 aaPredicted RBP23.73■■□□□ 1.39
CDC42BPB-201ENST00000361246 DACH1Q9UI36 760 aa23.73■■□□□ 1.39
CDC42BPB-201ENST00000361246 SLC12A7Q9Y666 1083 aa23.73■■□□□ 1.39
CDC42BPB-201ENST00000361246 IFIT3O14879 490 aaKnown RBP23.73■■□□□ 1.39
CDC42BPB-201ENST00000361246 FAM43AQ8N2R8 423 aa23.73■■□□□ 1.39
CDC42BPB-201ENST00000361246 MYO1BO43795 1136 aa23.73■■□□□ 1.39
CDC42BPB-201ENST00000361246 LRPPRCP42704 1394 aaKnown RBP23.73■■□□□ 1.39
CDC42BPB-201ENST00000361246 TAF3Q5VWG9 929 aa23.72■■□□□ 1.39
CDC42BPB-201ENST00000361246 UPF3BQ9BZI7 483 aaKnown RBP23.72■■□□□ 1.39
CDC42BPB-201ENST00000361246 UBE3BQ7Z3V4 1068 aa23.72■■□□□ 1.39
CDC42BPB-201ENST00000361246 SETDB2Q96T68 719 aa23.72■■□□□ 1.39
CDC42BPB-201ENST00000361246 HSP90AB3PQ58FF7 597 aa23.71■■□□□ 1.39
CDC42BPB-201ENST00000361246 DNAAF4Q8WXU2 420 aa23.71■■□□□ 1.39
CDC42BPB-201ENST00000361246 ACEP12821 1306 aa23.71■■□□□ 1.39
CDC42BPB-201ENST00000361246 PDE3AQ14432 1141 aa23.71■■□□□ 1.39
CDC42BPB-201ENST00000361246 KIAA1328Q86T90 577 aa23.71■■□□□ 1.39
CDC42BPB-201ENST00000361246 U3KPZ7 1027 aaPredicted RBP23.71■■□□□ 1.39
CDC42BPB-201ENST00000361246 CTCFLQ8NI51 663 aaPredicted RBP23.7■■□□□ 1.39
CDC42BPB-201ENST00000361246 PLCD4Q9BRC7 762 aa23.7■■□□□ 1.39
CDC42BPB-201ENST00000361246 MX1P20591 662 aa23.7■■□□□ 1.38
CDC42BPB-201ENST00000361246 IFNL2Q8IZJ0 200 aa23.7■■□□□ 1.38
CDC42BPB-201ENST00000361246 CWC25Q9NXE8 425 aaPredicted RBP23.7■■□□□ 1.38
CDC42BPB-201ENST00000361246 TRIM21P19474 475 aaKnown RBP23.7■■□□□ 1.38
CDC42BPB-201ENST00000361246 ERLIN2O94905 339 aa23.7■■□□□ 1.38
CDC42BPB-201ENST00000361246 DESP17661 470 aa23.7■■□□□ 1.38
CDC42BPB-201ENST00000361246 WASF1Q92558 559 aa23.7■■□□□ 1.38
CDC42BPB-201ENST00000361246 PODXL2Q9NZ53 605 aa23.7■■□□□ 1.38
CDC42BPB-201ENST00000361246 CAMSAP2Q08AD1 1489 aa23.69■■□□□ 1.38
CDC42BPB-201ENST00000361246 PPP1R42Q7Z4L9 355 aa23.69■■□□□ 1.38
CDC42BPB-201ENST00000361246 IQCA1Q86XH1 822 aa23.69■■□□□ 1.38
CDC42BPB-201ENST00000361246 TSPY2A6NKD2 308 aa23.69■■□□□ 1.38
CDC42BPB-201ENST00000361246 MAGI1Q96QZ7 1491 aaPredicted RBP23.69■■□□□ 1.38
CDC42BPB-201ENST00000361246 CCDC192P0DO97 292 aa23.69■■□□□ 1.38
CDC42BPB-201ENST00000361246 ZNF408Q9H9D4 720 aa23.69■■□□□ 1.38
CDC42BPB-201ENST00000361246 WDR33Q9C0J8 1336 aaKnown RBP23.68■■□□□ 1.38
CDC42BPB-201ENST00000361246 HYPKQ9NX55 129 aa23.68■■□□□ 1.38
CDC42BPB-201ENST00000361246 IQGAP2Q13576 1575 aa23.68■■□□□ 1.38
CDC42BPB-201ENST00000361246 CDC5LQ99459 802 aaKnown RBP23.68■■□□□ 1.38
CDC42BPB-201ENST00000361246 GJA3Q9Y6H8 435 aa23.68■■□□□ 1.38
CDC42BPB-201ENST00000361246 SSRP1Q08945 709 aaKnown RBP23.68■■□□□ 1.38
CDC42BPB-201ENST00000361246 ISM2Q6H9L7 571 aa23.68■■□□□ 1.38
CDC42BPB-201ENST00000361246 CABP5Q9NP86 173 aa23.68■■□□□ 1.38
CDC42BPB-201ENST00000361246 LRRC59Q96AG4 307 aaKnown RBP23.67■■□□□ 1.38
CDC42BPB-201ENST00000361246 NOS1P29475 1434 aa23.67■■□□□ 1.38
CDC42BPB-201ENST00000361246 SLF2Q8IX21 1173 aa23.67■■□□□ 1.38
CDC42BPB-201ENST00000361246 PANK2Q9BZ23 570 aa23.67■■□□□ 1.38
CDC42BPB-201ENST00000361246 AAMPQ13685 434 aa23.67■■□□□ 1.38
CDC42BPB-201ENST00000361246 GOLGA8AA7E2F4 631 aa23.66■■□□□ 1.38
CDC42BPB-201ENST00000361246 GOLGA8BA8MQT2 603 aa23.66■■□□□ 1.38
CDC42BPB-201ENST00000361246 PUF60Q9UHX1 559 aaKnown RBP23.66■■□□□ 1.38
CDC42BPB-201ENST00000361246 ZCRB1Q8TBF4 217 aaKnown RBP23.66■■□□□ 1.38
CDC42BPB-201ENST00000361246 CKAP2LQ8IYA6 745 aa23.66■■□□□ 1.38
CDC42BPB-201ENST00000361246 MACROD2A1Z1Q3 448 aa23.66■■□□□ 1.38
CDC42BPB-201ENST00000361246 FILIP1Q7Z7B0 1213 aa23.66■■□□□ 1.38
CDC42BPB-201ENST00000361246 SSH1Q8WYL5 1049 aa23.66■■□□□ 1.38
CDC42BPB-201ENST00000361246 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.66■■□□□ 1.38
CDC42BPB-201ENST00000361246 CCDC141Q6ZP82 1450 aa23.65■■□□□ 1.38
CDC42BPB-201ENST00000361246 CEP131Q9UPN4 1083 aa23.65■■□□□ 1.38
CDC42BPB-201ENST00000361246 EFCAB5A4FU69 1503 aa23.65■■□□□ 1.38
CDC42BPB-201ENST00000361246 DNMBPQ6XZF7 1577 aa23.65■■□□□ 1.38
CDC42BPB-201ENST00000361246 KRT32Q14532 448 aa23.64■■□□□ 1.38
CDC42BPB-201ENST00000361246 CATIPQ7Z7H3 387 aa23.64■■□□□ 1.38
CDC42BPB-201ENST00000361246 USP8P40818 1118 aa23.64■■□□□ 1.38
CDC42BPB-201ENST00000361246 CTNNBL1Q8WYA6 563 aaPredicted RBP23.64■■□□□ 1.38
CDC42BPB-201ENST00000361246 CT47B1P0C2W7 299 aaPredicted RBP23.64■■□□□ 1.38
CDC42BPB-201ENST00000361246 NIP7Q9Y221 180 aaKnown RBP eCLIP23.64■■□□□ 1.38
CDC42BPB-201ENST00000361246 H0YHG0 523 aa23.64■■□□□ 1.37
CDC42BPB-201ENST00000361246 ANAPC15P60006 121 aa23.64■■□□□ 1.37
CDC42BPB-201ENST00000361246 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.64■■□□□ 1.37
CDC42BPB-201ENST00000361246 LUC7LQ9NQ29 371 aaKnown RBP23.63■■□□□ 1.37
CDC42BPB-201ENST00000361246 CFAP45Q9UL16 551 aa23.63■■□□□ 1.37
CDC42BPB-201ENST00000361246 DDB1Q16531 1140 aa23.63■■□□□ 1.37
CDC42BPB-201ENST00000361246 CADPS2Q86UW7 1296 aa23.63■■□□□ 1.37
CDC42BPB-201ENST00000361246 HLA-DOAP06340 250 aa23.63■■□□□ 1.37
CDC42BPB-201ENST00000361246 RBM10P98175 930 aaKnown RBP23.63■■□□□ 1.37
CDC42BPB-201ENST00000361246 KAT14Q9H8E8 782 aa23.63■■□□□ 1.37
CDC42BPB-201ENST00000361246 MBD3O95983 291 aa23.63■■□□□ 1.37
CDC42BPB-201ENST00000361246 BIN2Q9UBW5 565 aaPredicted RBP23.63■■□□□ 1.37
CDC42BPB-201ENST00000361246 WDR97A6NE52 1622 aa23.62■■□□□ 1.37
CDC42BPB-201ENST00000361246 DBF4Q9UBU7 674 aaPredicted RBP23.62■■□□□ 1.37
CDC42BPB-201ENST00000361246 PI4KAP2A4QPH2 592 aa23.62■■□□□ 1.37
CDC42BPB-201ENST00000361246 PI4KAP1Q8N8J0 262 aa23.62■■□□□ 1.37
CDC42BPB-201ENST00000361246 TSPYL1Q9H0U9 437 aa23.62■■□□□ 1.37
CDC42BPB-201ENST00000361246 NUP62CLQ9H1M0 184 aa23.62■■□□□ 1.37
CDC42BPB-201ENST00000361246 PCF11O94913 1555 aaKnown RBP23.62■■□□□ 1.37
CDC42BPB-201ENST00000361246 GLRX3O76003 335 aaKnown RBP23.61■■□□□ 1.37
CDC42BPB-201ENST00000361246 TMEM67Q5HYA8 995 aa23.61■■□□□ 1.37
CDC42BPB-201ENST00000361246 C8orf76Q96K31 380 aa23.61■■□□□ 1.37
CDC42BPB-201ENST00000361246 STX8Q9UNK0 236 aa23.61■■□□□ 1.37
CDC42BPB-201ENST00000361246 PPP1R12BO60237 982 aaPredicted RBP23.61■■□□□ 1.37
CDC42BPB-201ENST00000361246 RAB11FIP3O75154 756 aa23.61■■□□□ 1.37
CDC42BPB-201ENST00000361246 CFAP100Q494V2 611 aa23.61■■□□□ 1.37
CDC42BPB-201ENST00000361246 BICD1Q96G01 975 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms