RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 SSH3Q8TE77 659 aa27.85■■■□□ 2.05
LDB1-201ENST00000361198 SPG7Q9UQ90 795 aa27.85■■■□□ 2.05
LDB1-201ENST00000361198 SCN11AQ9UI33 1791 aa27.84■■■□□ 2.05
LDB1-201ENST00000361198 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.84■■■□□ 2.05
LDB1-201ENST00000361198 SLC39A6Q13433 755 aa27.83■■■□□ 2.05
LDB1-201ENST00000361198 PPP1R42Q7Z4L9 355 aa27.83■■■□□ 2.05
LDB1-201ENST00000361198 SLC52A2Q9HAB3 445 aa27.83■■■□□ 2.05
LDB1-201ENST00000361198 TSHZ3Q63HK5 1081 aa27.82■■■□□ 2.04
LDB1-201ENST00000361198 ZNF790Q6PG37 636 aa27.82■■■□□ 2.04
LDB1-201ENST00000361198 EIF5BO60841 1220 aaKnown RBP27.81■■■□□ 2.04
LDB1-201ENST00000361198 L1TD1Q5T7N2 865 aaKnown RBP27.81■■■□□ 2.04
LDB1-201ENST00000361198 NFATC2IPQ8NCF5 419 aa27.81■■■□□ 2.04
LDB1-201ENST00000361198 CPDO75976 1380 aa27.81■■■□□ 2.04
LDB1-201ENST00000361198 STRCQ7RTU9 1775 aa27.81■■■□□ 2.04
LDB1-201ENST00000361198 IFNL2Q8IZJ0 200 aa27.81■■■□□ 2.04
LDB1-201ENST00000361198 MAP3K2Q9Y2U5 619 aa27.81■■■□□ 2.04
LDB1-201ENST00000361198 ABCC6O95255 1503 aa27.8■■■□□ 2.04
LDB1-201ENST00000361198 POLA2Q14181 598 aa27.8■■■□□ 2.04
LDB1-201ENST00000361198 RBM42Q9BTD8 480 aaKnown RBP27.8■■■□□ 2.04
LDB1-201ENST00000361198 MX1P20591 662 aa27.79■■■□□ 2.04
LDB1-201ENST00000361198 CASC1Q6TDU7 716 aa27.79■■■□□ 2.04
LDB1-201ENST00000361198 KSR2Q6VAB6 950 aa27.79■■■□□ 2.04
LDB1-201ENST00000361198 USP26Q9BXU7 913 aa27.79■■■□□ 2.04
LDB1-201ENST00000361198 HYPKQ9NX55 129 aa27.79■■■□□ 2.04
LDB1-201ENST00000361198 CYP27B1O15528 508 aa27.78■■■□□ 2.04
LDB1-201ENST00000361198 CD2BP2O95400 341 aaKnown RBP27.78■■■□□ 2.04
LDB1-201ENST00000361198 SRGAP3O43295 1099 aa27.78■■■□□ 2.04
LDB1-201ENST00000361198 CIZ1Q9ULV3 898 aaPredicted RBP27.77■■■□□ 2.04
LDB1-201ENST00000361198 SURF6O75683 361 aaKnown RBP27.76■■■□□ 2.04
LDB1-201ENST00000361198 PDIA6Q15084 440 aa27.76■■■□□ 2.04
LDB1-201ENST00000361198 DDX21Q9NR30 783 aaKnown RBP eCLIP27.76■■■□□ 2.04
LDB1-201ENST00000361198 KDM4FA0A1W2PPD8 638 aa27.76■■■□□ 2.03
LDB1-201ENST00000361198 IL1RAPL2Q9NP60 686 aa27.76■■■□□ 2.03
LDB1-201ENST00000361198 ZNF335Q9H4Z2 1342 aaPredicted RBP27.76■■■□□ 2.03
LDB1-201ENST00000361198 TUBGCP6Q96RT7 1819 aa27.75■■■□□ 2.03
LDB1-201ENST00000361198 FSD2A1L4K1 749 aa27.75■■■□□ 2.03
LDB1-201ENST00000361198 SLAIN2Q9P270 581 aa27.75■■■□□ 2.03
LDB1-201ENST00000361198 DCAF5Q96JK2 942 aa27.74■■■□□ 2.03
LDB1-201ENST00000361198 STAP2Q9UGK3 403 aa27.74■■■□□ 2.03
LDB1-201ENST00000361198 RAB11FIP3O75154 756 aa27.74■■■□□ 2.03
LDB1-201ENST00000361198 ALDH1L1O75891 902 aa27.74■■■□□ 2.03
LDB1-201ENST00000361198 CWF19L2Q2TBE0 894 aaKnown RBP27.74■■■□□ 2.03
LDB1-201ENST00000361198 PLEKHG2Q9H7P9 1386 aa27.74■■■□□ 2.03
LDB1-201ENST00000361198 TRAK2O60296 914 aa27.73■■■□□ 2.03
LDB1-201ENST00000361198 AIMP1Q12904 312 aaKnown RBP27.73■■■□□ 2.03
LDB1-201ENST00000361198 C5P01031 1676 aa27.73■■■□□ 2.03
LDB1-201ENST00000361198 DDX11L8A8MPP1 907 aa27.72■■■□□ 2.03
LDB1-201ENST00000361198 PKD1L3Q7Z443 1732 aa27.72■■■□□ 2.03
LDB1-201ENST00000361198 ZNF496Q96IT1 587 aaPredicted RBP27.72■■■□□ 2.03
LDB1-201ENST00000361198 SOS2Q07890 1332 aaPredicted RBP27.72■■■□□ 2.03
LDB1-201ENST00000361198 HSP90AB1P08238 724 aaKnown RBP27.72■■■□□ 2.03
LDB1-201ENST00000361198 C9orf78Q9NZ63 289 aaPredicted RBP27.72■■■□□ 2.03
LDB1-201ENST00000361198 RHPN1Q8TCX5 695 aa27.71■■■□□ 2.03
LDB1-201ENST00000361198 FAM43AQ8N2R8 423 aa27.71■■■□□ 2.03
LDB1-201ENST00000361198 PRDM11Q9NQV5 511 aa27.71■■■□□ 2.03
LDB1-201ENST00000361198 ERC2O15083 957 aa27.7■■■□□ 2.03
LDB1-201ENST00000361198 REC8O95072 547 aa27.7■■■□□ 2.02
LDB1-201ENST00000361198 DDX58O95786 925 aaKnown RBP27.7■■■□□ 2.02
LDB1-201ENST00000361198 MRC1P22897 1456 aa27.7■■■□□ 2.02
LDB1-201ENST00000361198 K7ELQ4 463 aaPredicted RBP27.69■■■□□ 2.02
LDB1-201ENST00000361198 NUTM1Q86Y26 1132 aa27.69■■■□□ 2.02
LDB1-201ENST00000361198 MTX1Q13505 466 aa27.69■■■□□ 2.02
LDB1-201ENST00000361198 LINS1Q8NG48 757 aa27.69■■■□□ 2.02
LDB1-201ENST00000361198 MYL6BP14649 208 aa27.68■■■□□ 2.02
LDB1-201ENST00000361198 RABEP1Q15276 862 aa27.68■■■□□ 2.02
LDB1-201ENST00000361198 KIF1BPQ96EK5 621 aa27.68■■■□□ 2.02
LDB1-201ENST00000361198 GOLGA6L3A6NEY3 463 aa27.67■■■□□ 2.02
LDB1-201ENST00000361198 TRIM6-TRIM34B2RNG4 842 aa27.67■■■□□ 2.02
LDB1-201ENST00000361198 RILPL2Q969X0 211 aa27.67■■■□□ 2.02
LDB1-201ENST00000361198 RAB3GAP1Q15042 981 aa27.67■■■□□ 2.02
LDB1-201ENST00000361198 TTC5Q8N0Z6 440 aa27.67■■■□□ 2.02
LDB1-201ENST00000361198 AOX1Q06278 1338 aa27.67■■■□□ 2.02
LDB1-201ENST00000361198 WDR17Q8IZU2 1322 aa27.67■■■□□ 2.02
LDB1-201ENST00000361198 UNC5CLQ8IV45 518 aa27.66■■■□□ 2.02
LDB1-201ENST00000361198 USP16Q9Y5T5 823 aa27.66■■■□□ 2.02
LDB1-201ENST00000361198 TOM1L2Q6ZVM7 507 aa27.65■■■□□ 2.02
LDB1-201ENST00000361198 TNPO1Q92973 898 aaKnown RBP27.65■■■□□ 2.02
LDB1-201ENST00000361198 SNRPA1P09661 255 aaKnown RBP27.65■■■□□ 2.02
LDB1-201ENST00000361198 RIC3Q7Z5B4 369 aa27.65■■■□□ 2.02
LDB1-201ENST00000361198 GRM8O00222 908 aa27.64■■■□□ 2.02
LDB1-201ENST00000361198 XRCC6P12956 609 aaKnown RBP eCLIP27.64■■■□□ 2.023e-6■■■□□ 15.3
LDB1-201ENST00000361198 CABP4P57796 275 aa27.64■■■□□ 2.02
LDB1-201ENST00000361198 XAGE3Q8WTP9 111 aa27.64■■■□□ 2.02
LDB1-201ENST00000361198 HSP90AB4PQ58FF6 505 aa27.64■■■□□ 2.01
LDB1-201ENST00000361198 ESYT1Q9BSJ8 1104 aa27.64■■■□□ 2.01
LDB1-201ENST00000361198 IGKV5-2P06315 115 aa27.63■■■□□ 2.01
LDB1-201ENST00000361198 CHMLP26374 656 aa27.63■■■□□ 2.01
LDB1-201ENST00000361198 COPS6Q7L5N1 327 aa27.63■■■□□ 2.01
LDB1-201ENST00000361198 FMNL2Q96PY5 1086 aa27.63■■■□□ 2.01
LDB1-201ENST00000361198 KAZALD1Q96I82 304 aa27.62■■■□□ 2.01
LDB1-201ENST00000361198 UTYO14607 1347 aa27.62■■■□□ 2.01
LDB1-201ENST00000361198 HSP90AA1P07900 732 aaKnown RBP27.62■■■□□ 2.01
LDB1-201ENST00000361198 LRP10Q7Z4F1 713 aa27.62■■■□□ 2.01
LDB1-201ENST00000361198 PI4K2BQ8TCG2 481 aa27.62■■■□□ 2.01
LDB1-201ENST00000361198 SUCLG2Q96I99 432 aa27.62■■■□□ 2.01
LDB1-201ENST00000361198 GZF1Q9H116 711 aaPredicted RBP27.62■■■□□ 2.01
LDB1-201ENST00000361198 HDAC5Q9UQL6 1122 aa27.62■■■□□ 2.01
LDB1-201ENST00000361198 COL5A2P05997 1499 aaPredicted RBP27.61■■■□□ 2.01
LDB1-201ENST00000361198 PIP4K2AP48426 406 aaPredicted RBP27.61■■■□□ 2.01
LDB1-201ENST00000361198 LARP1Q6PKG0 1096 aaKnown RBP27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms