RNA–Protein interactions for RNA: ENST00000361168.9

CLK2-202, Transcript of CDC like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLK2, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-202ENST00000361168 RREB1Q92766 1687 aa23.2■■□□□ 1.3
CLK2-202ENST00000361168 TCERG1O14776 1098 aaKnown RBP23.2■■□□□ 1.3
CLK2-202ENST00000361168 CRKLP46109 303 aaKnown RBP23.2■■□□□ 1.3
CLK2-202ENST00000361168 INTS5Q6P9B9 1019 aaKnown RBP23.19■■□□□ 1.3
CLK2-202ENST00000361168 TAF1LQ8IZX4 1826 aa23.19■■□□□ 1.3
CLK2-202ENST00000361168 NUP188Q5SRE5 1749 aa23.19■■□□□ 1.3
CLK2-202ENST00000361168 MYH14Q7Z406 1995 aaKnown RBP23.18■■□□□ 1.3
CLK2-202ENST00000361168 ZBTB1Q9Y2K1 713 aa23.18■■□□□ 1.3
CLK2-202ENST00000361168 TWISTNBQ3B726 338 aaPredicted RBP23.18■■□□□ 1.3
CLK2-202ENST00000361168 ANXA1P04083 346 aa23.17■■□□□ 1.3
CLK2-202ENST00000361168 COL5A3P25940 1745 aaPredicted RBP23.17■■□□□ 1.3
CLK2-202ENST00000361168 NBPF26B4DH59 902 aa23.16■■□□□ 1.3
CLK2-202ENST00000361168 NBPF14Q5TI25 921 aa23.16■■□□□ 1.3
CLK2-202ENST00000361168 NBPF10Q6P3W6 841 aaKnown RBP23.16■■□□□ 1.3
CLK2-202ENST00000361168 NBPF15Q8N660 670 aa23.16■■□□□ 1.3
CLK2-202ENST00000361168 AKT1S1Q96B36 256 aa23.16■■□□□ 1.3
CLK2-202ENST00000361168 ZNF831Q5JPB2 1677 aa23.16■■□□□ 1.3
CLK2-202ENST00000361168 C4BP0C0L5 1744 aa23.16■■□□□ 1.3
CLK2-202ENST00000361168 VAMP4O75379 141 aa23.16■■□□□ 1.3
CLK2-202ENST00000361168 PROSER3Q2NL68 480 aa23.16■■□□□ 1.3
CLK2-202ENST00000361168 STARD3NLO95772 234 aa23.15■■□□□ 1.3
CLK2-202ENST00000361168 CANXP27824 592 aaKnown RBP23.15■■□□□ 1.3
CLK2-202ENST00000361168 PDGFDQ9GZP0 370 aaPredicted RBP23.15■■□□□ 1.3
CLK2-202ENST00000361168 GNPATO15228 680 aa23.14■■□□□ 1.3
CLK2-202ENST00000361168 PDIA6Q15084 440 aa23.14■■□□□ 1.29
CLK2-202ENST00000361168 HDGFL1Q5TGJ6 251 aa23.14■■□□□ 1.29
CLK2-202ENST00000361168 CICQ96RK0 1608 aaPredicted RBP23.13■■□□□ 1.29
CLK2-202ENST00000361168 PHF14O94880 888 aa23.13■■□□□ 1.29
CLK2-202ENST00000361168 TEX13AQ9BXU3 409 aaPredicted RBP23.13■■□□□ 1.29
CLK2-202ENST00000361168 CCDC87Q9NVE4 849 aa23.13■■□□□ 1.29
CLK2-202ENST00000361168 MYL6BP14649 208 aa23.12■■□□□ 1.29
CLK2-202ENST00000361168 SLC15A2Q16348 729 aa23.12■■□□□ 1.29
CLK2-202ENST00000361168 AK7Q96M32 723 aa23.12■■□□□ 1.29
CLK2-202ENST00000361168 CHPF2Q9P2E5 772 aa23.12■■□□□ 1.29
CLK2-202ENST00000361168 ZNF330Q9Y3S2 320 aaPredicted RBP23.12■■□□□ 1.29
CLK2-202ENST00000361168 CNTNAP4Q9C0A0 1308 aa23.12■■□□□ 1.29
CLK2-202ENST00000361168 TFCP2L1Q9NZI6 479 aa23.12■■□□□ 1.29
CLK2-202ENST00000361168 PSDA5PKW4 1024 aaPredicted RBP23.1■■□□□ 1.29
CLK2-202ENST00000361168 HOXB7P09629 217 aa23.1■■□□□ 1.29
CLK2-202ENST00000361168 R3HDM1Q15032 1099 aaKnown RBP23.1■■□□□ 1.29
CLK2-202ENST00000361168 RC3H1Q5TC82 1133 aaKnown RBP23.1■■□□□ 1.29
CLK2-202ENST00000361168 LRP10Q7Z4F1 713 aa23.1■■□□□ 1.29
CLK2-202ENST00000361168 LAMB4A4D0S4 1761 aa23.09■■□□□ 1.29
CLK2-202ENST00000361168 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.08■■□□□ 1.29
CLK2-202ENST00000361168 BCL2L13Q9BXK5 485 aa23.08■■□□□ 1.29
CLK2-202ENST00000361168 STK32BQ9NY57 414 aa23.08■■□□□ 1.29
CLK2-202ENST00000361168 PNPLA7Q6ZV29 1317 aa23.08■■□□□ 1.28
CLK2-202ENST00000361168 GOLGB1Q14789 3259 aaKnown RBP23.07■■□□□ 1.28
CLK2-202ENST00000361168 RPS6KA4O75676 772 aa23.07■■□□□ 1.28
CLK2-202ENST00000361168 RTCBQ9Y3I0 505 aaKnown RBP23.07■■□□□ 1.28
CLK2-202ENST00000361168 SOS1Q07889 1333 aaPredicted RBP23.07■■□□□ 1.28
CLK2-202ENST00000361168 EIF5P55010 431 aaKnown RBP23.06■■□□□ 1.28
CLK2-202ENST00000361168 PHAXQ9H814 394 aaKnown RBP23.06■■□□□ 1.28
CLK2-202ENST00000361168 TUBGCP6Q96RT7 1819 aa23.06■■□□□ 1.28
CLK2-202ENST00000361168 COL23A1Q86Y22 540 aaPredicted RBP23.06■■□□□ 1.28
CLK2-202ENST00000361168 ARHGEF1Q92888 912 aaKnown RBP23.06■■□□□ 1.28
CLK2-202ENST00000361168 UBR3Q6ZT12 1888 aa23.06■■□□□ 1.28
CLK2-202ENST00000361168 CCDC30Q5VVM6 783 aa23.04■■□□□ 1.28
CLK2-202ENST00000361168 G2E3Q7L622 706 aa23.04■■□□□ 1.28
CLK2-202ENST00000361168 SSH1Q8WYL5 1049 aa23.04■■□□□ 1.28
CLK2-202ENST00000361168 TBC1D2BQ9UPU7 963 aa23.04■■□□□ 1.28
CLK2-202ENST00000361168 SLC4A2P04920 1241 aa23.04■■□□□ 1.28
CLK2-202ENST00000361168 IL6STP40189 918 aaPredicted RBP23.04■■□□□ 1.28
CLK2-202ENST00000361168 TTLL7Q6ZT98 887 aa23.04■■□□□ 1.28
CLK2-202ENST00000361168 ARXQ96QS3 562 aa23.04■■□□□ 1.28
CLK2-202ENST00000361168 DDX21Q9NR30 783 aaKnown RBP eCLIP23.04■■□□□ 1.28
CLK2-202ENST00000361168 DBF4Q9UBU7 674 aaPredicted RBP23.04■■□□□ 1.28
CLK2-202ENST00000361168 SRP68Q9UHB9 627 aaKnown RBP23.04■■□□□ 1.28
CLK2-202ENST00000361168 AIMP1Q12904 312 aaKnown RBP23.03■■□□□ 1.28
CLK2-202ENST00000361168 COL15A1P39059 1388 aa23.03■■□□□ 1.28
CLK2-202ENST00000361168 TRAPPC3LQ5T215 181 aa23.02■■□□□ 1.28
CLK2-202ENST00000361168 MSH5O43196 834 aa23.01■■□□□ 1.27
CLK2-202ENST00000361168 SSFA2P28290 1259 aa23.01■■□□□ 1.27
CLK2-202ENST00000361168 COPS6Q7L5N1 327 aa23.01■■□□□ 1.27
CLK2-202ENST00000361168 XAGE3Q8WTP9 111 aa23.01■■□□□ 1.27
CLK2-202ENST00000361168 BCAR3O75815 825 aa23■■□□□ 1.27
CLK2-202ENST00000361168 RARSP54136 660 aaKnown RBP23■■□□□ 1.27
CLK2-202ENST00000361168 ERBB4Q15303 1308 aa23■■□□□ 1.27
CLK2-202ENST00000361168 STK31Q9BXU1 1019 aa22.99■■□□□ 1.27
CLK2-202ENST00000361168 DZIP3Q86Y13 1208 aaKnown RBP22.98■■□□□ 1.27
CLK2-202ENST00000361168 RFC4P35249 363 aa22.98■■□□□ 1.27
CLK2-202ENST00000361168 USPL1Q5W0Q7 1092 aa22.97■■□□□ 1.27
CLK2-202ENST00000361168 MRPL50Q8N5N7 158 aaKnown RBP22.97■■□□□ 1.27
CLK2-202ENST00000361168 ZBTB3Q9H5J0 574 aa22.97■■□□□ 1.27
CLK2-202ENST00000361168 HYPKQ9NX55 129 aa22.97■■□□□ 1.27
CLK2-202ENST00000361168 C4AP0C0L4 1744 aa22.97■■□□□ 1.27
CLK2-202ENST00000361168 HLFQ16534 295 aa22.96■■□□□ 1.27
CLK2-202ENST00000361168 BCL2L12Q9HB09 334 aa22.96■■□□□ 1.27
CLK2-202ENST00000361168 SMC4Q9NTJ3 1288 aa22.96■■□□□ 1.27
CLK2-202ENST00000361168 USP42Q9H9J4 1324 aaKnown RBP22.96■■□□□ 1.27
CLK2-202ENST00000361168 CAMTA2O94983 1202 aa22.96■■□□□ 1.27
CLK2-202ENST00000361168 MSL1Q68DK7 614 aa22.96■■□□□ 1.27
CLK2-202ENST00000361168 ADRA2BP18089 450 aa22.95■■□□□ 1.26
CLK2-202ENST00000361168 ZNF428Q96B54 188 aa22.95■■□□□ 1.26
CLK2-202ENST00000361168 ZBTB7AO95365 584 aa22.94■■□□□ 1.26
CLK2-202ENST00000361168 CT47B1P0C2W7 299 aaPredicted RBP22.94■■□□□ 1.26
CLK2-202ENST00000361168 FLIIQ13045 1269 aa22.94■■□□□ 1.26
CLK2-202ENST00000361168 UTRNP46939 3433 aa22.94■■□□□ 1.26
CLK2-202ENST00000361168 GYS1P13807 737 aa22.94■■□□□ 1.26
CLK2-202ENST00000361168 FKBP8Q14318 412 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms