RNA–Protein interactions for RNA: ENST00000360171.10

CBWD3-201, Transcript of COBW domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBWD3, Length 2,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-201ENST00000360171 SPATA31A1Q5TZJ5 1347 aa25.26■■□□□ 1.63
CBWD3-201ENST00000360171 CABP4P57796 275 aa25.26■■□□□ 1.63
CBWD3-201ENST00000360171 UBR2Q8IWV8 1755 aa25.26■■□□□ 1.63
CBWD3-201ENST00000360171 GIGYF1O75420 1035 aaPredicted RBP25.25■■□□□ 1.63
CBWD3-201ENST00000360171 MFAP1P55081 439 aaKnown RBP25.25■■□□□ 1.63
CBWD3-201ENST00000360171 PRAMEF22A3QJZ6 481 aa25.25■■□□□ 1.63
CBWD3-201ENST00000360171 EIF2S2P20042 333 aaKnown RBP25.25■■□□□ 1.63
CBWD3-201ENST00000360171 RBM25P49756 843 aaKnown RBP25.25■■□□□ 1.63
CBWD3-201ENST00000360171 ITGB4P16144 1822 aa25.24■■□□□ 1.63
CBWD3-201ENST00000360171 N4BP2Q86UW6 1770 aaPredicted RBP25.24■■□□□ 1.63
CBWD3-201ENST00000360171 MCM4P33991 863 aa25.24■■□□□ 1.63
CBWD3-201ENST00000360171 FLIIQ13045 1269 aa25.22■■□□□ 1.63
CBWD3-201ENST00000360171 TNS2Q63HR2 1409 aa25.22■■□□□ 1.63
CBWD3-201ENST00000360171 SPATA31A5Q5VU36 1347 aa25.22■■□□□ 1.63
CBWD3-201ENST00000360171 SPATA31A7Q8IWB4 1347 aa25.22■■□□□ 1.63
CBWD3-201ENST00000360171 ERVV-2B6SEH9 535 aa25.22■■□□□ 1.63
CBWD3-201ENST00000360171 HSPA1LP34931 641 aa25.22■■□□□ 1.63
CBWD3-201ENST00000360171 SNX21Q969T3 373 aa25.21■■□□□ 1.63
CBWD3-201ENST00000360171 CHPF2Q9P2E5 772 aa25.21■■□□□ 1.63
CBWD3-201ENST00000360171 SPATA31A6Q5VVP1 1343 aa25.21■■□□□ 1.63
CBWD3-201ENST00000360171 C8orf37Q96NL8 207 aa25.21■■□□□ 1.63
CBWD3-201ENST00000360171 LAMB4A4D0S4 1761 aa25.21■■□□□ 1.63
CBWD3-201ENST00000360171 ZBTB7BO15156 539 aaPredicted RBP25.2■■□□□ 1.62
CBWD3-201ENST00000360171 INTS3Q68E01 1043 aaKnown RBP25.2■■□□□ 1.62
CBWD3-201ENST00000360171 CHD1LQ86WJ1 897 aa25.2■■□□□ 1.62
CBWD3-201ENST00000360171 HSCBQ8IWL3 235 aa25.2■■□□□ 1.62
CBWD3-201ENST00000360171 ZNF496Q96IT1 587 aaPredicted RBP25.2■■□□□ 1.62
CBWD3-201ENST00000360171 BCL9LQ86UU0 1499 aa25.2■■□□□ 1.62
CBWD3-201ENST00000360171 BMP2KLQ5H9B9 411 aa25.2■■□□□ 1.62
CBWD3-201ENST00000360171 GCC1Q96CN9 775 aa25.2■■□□□ 1.62
CBWD3-201ENST00000360171 PHAXQ9H814 394 aaKnown RBP25.2■■□□□ 1.62
CBWD3-201ENST00000360171 ANO8Q9HCE9 1232 aaPredicted RBP25.2■■□□□ 1.62
CBWD3-201ENST00000360171 F6X3S4 739 aa25.19■■□□□ 1.62
CBWD3-201ENST00000360171 THRAP3Q9Y2W1 955 aaKnown RBP25.19■■□□□ 1.62
CBWD3-201ENST00000360171 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.18■■□□□ 1.62
CBWD3-201ENST00000360171 TTC5Q8N0Z6 440 aa25.18■■□□□ 1.62
CBWD3-201ENST00000360171 KCPQ6ZWJ8 1503 aa25.17■■□□□ 1.62
CBWD3-201ENST00000360171 ANXA1P04083 346 aa25.17■■□□□ 1.62
CBWD3-201ENST00000360171 FKBP5Q13451 457 aaPredicted RBP25.17■■□□□ 1.62
CBWD3-201ENST00000360171 UNC5CLQ8IV45 518 aa25.17■■□□□ 1.62
CBWD3-201ENST00000360171 NGLY1Q96IV0 654 aa25.17■■□□□ 1.62
CBWD3-201ENST00000360171 DOT1LQ8TEK3 1739 aa25.17■■□□□ 1.62
CBWD3-201ENST00000360171 FSD2A1L4K1 749 aa25.16■■□□□ 1.62
CBWD3-201ENST00000360171 EXOC5O00471 708 aa25.16■■□□□ 1.62
CBWD3-201ENST00000360171 CCDC9Q9Y3X0 531 aaKnown RBP25.16■■□□□ 1.62
CBWD3-201ENST00000360171 DDIT3P35638 169 aa25.15■■□□□ 1.62
CBWD3-201ENST00000360171 CDCA7Q9BWT1 371 aaPredicted RBP25.15■■□□□ 1.62
CBWD3-201ENST00000360171 CHMP4AQ9BY43 222 aa25.15■■□□□ 1.62
CBWD3-201ENST00000360171 PROSER3Q2NL68 480 aa25.14■■□□□ 1.62
CBWD3-201ENST00000360171 FMNL2Q96PY5 1086 aa25.14■■□□□ 1.62
CBWD3-201ENST00000360171 KAT6BQ8WYB5 2073 aa25.14■■□□□ 1.62
CBWD3-201ENST00000360171 LNPKQ9C0E8 428 aa25.14■■□□□ 1.61
CBWD3-201ENST00000360171 DBF4Q9UBU7 674 aaPredicted RBP25.14■■□□□ 1.61
CBWD3-201ENST00000360171 SLC4A10Q6U841 1118 aa25.13■■□□□ 1.61
CBWD3-201ENST00000360171 FNBP4Q8N3X1 1017 aaPredicted RBP25.13■■□□□ 1.61
CBWD3-201ENST00000360171 C1orf115Q9H7X2 142 aa25.13■■□□□ 1.61
CBWD3-201ENST00000360171 DDX11L8A8MPP1 907 aa25.12■■□□□ 1.61
CBWD3-201ENST00000360171 BARGINQ6ZT62 677 aa25.12■■□□□ 1.61
CBWD3-201ENST00000360171 CIZ1Q9ULV3 898 aaPredicted RBP25.12■■□□□ 1.61
CBWD3-201ENST00000360171 PXDNLA1KZ92 1463 aa25.12■■□□□ 1.61
CBWD3-201ENST00000360171 SNRPA1P09661 255 aaKnown RBP25.11■■□□□ 1.61
CBWD3-201ENST00000360171 PDIA6Q15084 440 aa25.11■■□□□ 1.61
CBWD3-201ENST00000360171 VPS72Q15906 364 aa25.11■■□□□ 1.61
CBWD3-201ENST00000360171 TMOD3Q9NYL9 352 aa25.11■■□□□ 1.61
CBWD3-201ENST00000360171 USP16Q9Y5T5 823 aa25.11■■□□□ 1.61
CBWD3-201ENST00000360171 GOLGA6L3A6NEY3 463 aa25.1■■□□□ 1.61
CBWD3-201ENST00000360171 DDB1Q16531 1140 aa25.1■■□□□ 1.61
CBWD3-201ENST00000360171 CCT4P50991 539 aaKnown RBP25.1■■□□□ 1.61
CBWD3-201ENST00000360171 SPRYD3Q8NCJ5 442 aa25.09■■□□□ 1.61
CBWD3-201ENST00000360171 PIGBQ92521 554 aa25.09■■□□□ 1.61
CBWD3-201ENST00000360171 ISY1Q9ULR0 285 aaKnown RBP25.09■■□□□ 1.61
CBWD3-201ENST00000360171 TRAK2O60296 914 aa25.08■■□□□ 1.61
CBWD3-201ENST00000360171 DDX21Q9NR30 783 aaKnown RBP eCLIP25.08■■□□□ 1.61
CBWD3-201ENST00000360171 MEIS3Q99687 375 aa25.08■■□□□ 1.61
CBWD3-201ENST00000360171 ADCY9O60503 1353 aa25.08■■□□□ 1.6
CBWD3-201ENST00000360171 EIF5BO60841 1220 aaKnown RBP25.07■■□□□ 1.6
CBWD3-201ENST00000360171 USP21Q9UK80 565 aa25.07■■□□□ 1.6
CBWD3-201ENST00000360171 BCL9O00512 1426 aa25.07■■□□□ 1.6
CBWD3-201ENST00000360171 FAM98CQ17RN3 349 aaKnown RBP25.06■■□□□ 1.6
CBWD3-201ENST00000360171 MARCH10Q8NA82 808 aaPredicted RBP25.05■■□□□ 1.6
CBWD3-201ENST00000360171 HYPKQ9NX55 129 aa25.05■■□□□ 1.6
CBWD3-201ENST00000360171 ATP10DQ9P241 1426 aa25.05■■□□□ 1.6
CBWD3-201ENST00000360171 PI4KAP2A4QPH2 592 aa25.05■■□□□ 1.6
CBWD3-201ENST00000360171 PTCD1O75127 700 aaKnown RBP25.05■■□□□ 1.6
CBWD3-201ENST00000360171 ANKRD45Q5TZF3 282 aa25.05■■□□□ 1.6
CBWD3-201ENST00000360171 PI4KAP1Q8N8J0 262 aa25.05■■□□□ 1.6
CBWD3-201ENST00000360171 XRCC6P12956 609 aaKnown RBP eCLIP25.04■■□□□ 1.6
CBWD3-201ENST00000360171 ASAP1Q9ULH1 1129 aa25.04■■□□□ 1.6
CBWD3-201ENST00000360171 THSD7AQ9UPZ6 1657 aa25.04■■□□□ 1.6
CBWD3-201ENST00000360171 MEX3CQ5U5Q3 659 aaKnown RBP25.04■■□□□ 1.6
CBWD3-201ENST00000360171 SIRT2Q8IXJ6 389 aa25.04■■□□□ 1.6
CBWD3-201ENST00000360171 PIP4K2AP48426 406 aaPredicted RBP25.03■■□□□ 1.6
CBWD3-201ENST00000360171 MYL6BP14649 208 aa25.03■■□□□ 1.6
CBWD3-201ENST00000360171 PTMSP20962 102 aa25.03■■□□□ 1.6
CBWD3-201ENST00000360171 LRP10Q7Z4F1 713 aa25.03■■□□□ 1.6
CBWD3-201ENST00000360171 DNAAF4Q8WXU2 420 aa25.03■■□□□ 1.6
CBWD3-201ENST00000360171 KIF2CQ99661 725 aa25.03■■□□□ 1.6
CBWD3-201ENST00000360171 ATG3Q9NT62 314 aa25.02■■□□□ 1.6
CBWD3-201ENST00000360171 PRIM1P49642 420 aaKnown RBP25■■□□□ 1.59
CBWD3-201ENST00000360171 MRE11P49959 708 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms