RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 MEIS3Q99687 375 aa6.41□□□□□ -1.38
ATXN3-202ENST00000359366 BACH2Q9BYV9 841 aa6.41□□□□□ -1.38
ATXN3-202ENST00000359366 RWDD1Q9H446 243 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-202ENST00000359366 CEMIPQ8WUJ3 1361 aa6.41□□□□□ -1.38
ATXN3-202ENST00000359366 CRYBG1Q9Y4K1 1723 aa6.41□□□□□ -1.38
ATXN3-202ENST00000359366 CAMTA1Q9Y6Y1 1673 aa6.41□□□□□ -1.38
ATXN3-202ENST00000359366 HTATSF1O43719 755 aaKnown RBP6.41□□□□□ -1.38
ATXN3-202ENST00000359366 TATP17735 454 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-202ENST00000359366 BRPF1P55201 1214 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-202ENST00000359366 FKBP5Q13451 457 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-202ENST00000359366 LARP1Q6PKG0 1096 aaKnown RBP6.41□□□□□ -1.38
ATXN3-202ENST00000359366 NFATC2IPQ8NCF5 419 aa6.41□□□□□ -1.38
ATXN3-202ENST00000359366 ZMYND15Q9H091 742 aa6.41□□□□□ -1.38
ATXN3-202ENST00000359366 CYP27B1O15528 508 aa6.4□□□□□ -1.38
ATXN3-202ENST00000359366 EIF4A1P60842 406 aaKnown RBP6.4□□□□□ -1.38
ATXN3-202ENST00000359366 PROSER3Q2NL68 480 aa6.4□□□□□ -1.38
ATXN3-202ENST00000359366 AMOTQ4VCS5 1084 aa6.4□□□□□ -1.38
ATXN3-202ENST00000359366 STK31Q9BXU1 1019 aa6.4□□□□□ -1.38
ATXN3-202ENST00000359366 API5Q9BZZ5 524 aaKnown RBP6.4□□□□□ -1.38
ATXN3-202ENST00000359366 LNPKQ9C0E8 428 aa6.4□□□□□ -1.38
ATXN3-202ENST00000359366 CHPF2Q9P2E5 772 aa6.4□□□□□ -1.38
ATXN3-202ENST00000359366 FLIIQ13045 1269 aa6.4□□□□□ -1.39
ATXN3-202ENST00000359366 C8orf34Q49A92 452 aa6.4□□□□□ -1.39
ATXN3-202ENST00000359366 DDX54Q8TDD1 881 aaKnown RBP6.4□□□□□ -1.39
ATXN3-202ENST00000359366 ARHGAP45Q92619 1136 aa6.4□□□□□ -1.39
ATXN3-202ENST00000359366 SPDYE4A6NLX3 237 aa6.39□□□□□ -1.39
ATXN3-202ENST00000359366 ADAMTS2O95450 1211 aa6.39□□□□□ -1.39
ATXN3-202ENST00000359366 PHKG2P15735 406 aa6.39□□□□□ -1.39
ATXN3-202ENST00000359366 EVA1CP58658 441 aa6.39□□□□□ -1.39
ATXN3-202ENST00000359366 CCDC30Q5VVM6 783 aa6.39□□□□□ -1.39
ATXN3-202ENST00000359366 LMO7Q8WWI1 1683 aa6.39□□□□□ -1.39
ATXN3-202ENST00000359366 FAM208AQ9UK61 1670 aaKnown RBP6.39□□□□□ -1.39
ATXN3-202ENST00000359366 KDM6AO15550 1401 aaPredicted RBP6.39□□□□□ -1.39
ATXN3-202ENST00000359366 PLCB2Q00722 1185 aa6.39□□□□□ -1.39
ATXN3-202ENST00000359366 TPRNQ4KMQ1 711 aa6.39□□□□□ -1.39
ATXN3-202ENST00000359366 BTG4Q9NY30 223 aa6.39□□□□□ -1.39
ATXN3-202ENST00000359366 NCAPD2Q15021 1401 aa6.38□□□□□ -1.39
ATXN3-202ENST00000359366 NUTM2BA6NNL0 878 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-202ENST00000359366 NUTM2EB1AL46 878 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-202ENST00000359366 AIMP1Q12904 312 aaKnown RBP6.38□□□□□ -1.39
ATXN3-202ENST00000359366 ANKRD45Q5TZF3 282 aa6.38□□□□□ -1.39
ATXN3-202ENST00000359366 NUTM2AQ8IVF1 878 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-202ENST00000359366 ROBO1Q9Y6N7 1651 aa6.38□□□□□ -1.39
ATXN3-202ENST00000359366 MYL6BP14649 208 aa6.38□□□□□ -1.39
ATXN3-202ENST00000359366 HDAC1Q13547 482 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-202ENST00000359366 INTS3Q68E01 1043 aaKnown RBP6.38□□□□□ -1.39
ATXN3-202ENST00000359366 MARVELD3Q96A59 401 aa6.38□□□□□ -1.39
ATXN3-202ENST00000359366 SPG7Q9UQ90 795 aa6.38□□□□□ -1.39
ATXN3-202ENST00000359366 CPDO75976 1380 aa6.38□□□□□ -1.39
ATXN3-202ENST00000359366 PTPRCP08575 1304 aa6.38□□□□□ -1.39
ATXN3-202ENST00000359366 WDR17Q8IZU2 1322 aa6.38□□□□□ -1.39
ATXN3-202ENST00000359366 COL5A2P05997 1499 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-202ENST00000359366 SMARCA5O60264 1052 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-202ENST00000359366 BRD2P25440 801 aaKnown RBP6.37□□□□□ -1.39
ATXN3-202ENST00000359366 FAM161AQ3B820 660 aa6.37□□□□□ -1.39
ATXN3-202ENST00000359366 SLC52A2Q9HAB3 445 aa6.37□□□□□ -1.39
ATXN3-202ENST00000359366 ABCA3Q99758 1704 aa6.37□□□□□ -1.39
ATXN3-202ENST00000359366 KDM3BQ7LBC6 1761 aa6.37□□□□□ -1.39
ATXN3-202ENST00000359366 PI4KAP2A4QPH2 592 aa6.37□□□□□ -1.39
ATXN3-202ENST00000359366 GIGYF1O75420 1035 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-202ENST00000359366 SLC4A3P48751 1232 aa6.37□□□□□ -1.39
ATXN3-202ENST00000359366 C16orf71Q8IYS4 520 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-202ENST00000359366 IFNL2Q8IZJ0 200 aa6.37□□□□□ -1.39
ATXN3-202ENST00000359366 PI4KAP1Q8N8J0 262 aa6.37□□□□□ -1.39
ATXN3-202ENST00000359366 ZNF496Q96IT1 587 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-202ENST00000359366 NHSL1Q5SYE7 1610 aa6.36□□□□□ -1.39
ATXN3-202ENST00000359366 CEP85Q6P2H3 762 aa6.36□□□□□ -1.39
ATXN3-202ENST00000359366 ZNF790Q6PG37 636 aa6.36□□□□□ -1.39
ATXN3-202ENST00000359366 SMC5Q8IY18 1101 aa6.36□□□□□ -1.39
ATXN3-202ENST00000359366 ZCRB1Q8TBF4 217 aaKnown RBP6.36□□□□□ -1.39
ATXN3-202ENST00000359366 OTUD7AQ8TE49 926 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-202ENST00000359366 A0A0G2JS52 829 aa6.36□□□□□ -1.39
ATXN3-202ENST00000359366 PTCD1O75127 700 aaKnown RBP6.36□□□□□ -1.39
ATXN3-202ENST00000359366 ANP32AP39687 249 aaKnown RBP6.36□□□□□ -1.39
ATXN3-202ENST00000359366 CABP4P57796 275 aa6.36□□□□□ -1.39
ATXN3-202ENST00000359366 NUCB1Q02818 461 aa6.36□□□□□ -1.39
ATXN3-202ENST00000359366 CHD1LQ86WJ1 897 aa6.36□□□□□ -1.39
ATXN3-202ENST00000359366 BCL11BQ9C0K0 894 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-202ENST00000359366 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-202ENST00000359366 COLQQ9Y215 455 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-202ENST00000359366 USP16Q9Y5T5 823 aa6.36□□□□□ -1.39
ATXN3-202ENST00000359366 LRRFIP2Q9Y608 721 aaKnown RBP6.36□□□□□ -1.39
ATXN3-202ENST00000359366 EP400Q96L91 3159 aa6.35□□□□□ -1.39
ATXN3-202ENST00000359366 ATP10DQ9P241 1426 aa6.35□□□□□ -1.39
ATXN3-202ENST00000359366 TULP1O00294 542 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-202ENST00000359366 PROM2Q8N271 834 aa6.35□□□□□ -1.39
ATXN3-202ENST00000359366 JARID2Q92833 1246 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-202ENST00000359366 BMP2KQ9NSY1 1161 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-202ENST00000359366 EXOC6BQ9Y2D4 811 aa6.35□□□□□ -1.39
ATXN3-202ENST00000359366 SCN11AQ9UI33 1791 aa6.35□□□□□ -1.39
ATXN3-202ENST00000359366 SIPA1L3O60292 1781 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-202ENST00000359366 LTBP4Q8N2S1 1624 aa6.35□□□□□ -1.39
ATXN3-202ENST00000359366 PNMA6EA0A0J9YXQ4 647 aa6.35□□□□□ -1.39
ATXN3-202ENST00000359366 NBPF7P0C2Y1 421 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-202ENST00000359366 IL2RBP14784 551 aa6.35□□□□□ -1.39
ATXN3-202ENST00000359366 RBM10P98175 930 aaKnown RBP6.35□□□□□ -1.39
ATXN3-202ENST00000359366 CWF19L2Q2TBE0 894 aaKnown RBP6.35□□□□□ -1.39
ATXN3-202ENST00000359366 TSHZ3Q63HK5 1081 aa6.35□□□□□ -1.39
ATXN3-202ENST00000359366 KRTAP3-3Q9BYR6 98 aa6.35□□□□□ -1.39
ATXN3-202ENST00000359366 KRTAP3-2Q9BYR7 98 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms