RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 CWF19L2Q2TBE0 894 aaKnown RBP13.51□□□□□ -0.25
SSU72-202ENST00000359060 DNTTIP2Q5QJE6 756 aaKnown RBP13.51□□□□□ -0.25
SSU72-202ENST00000359060 ERC1Q8IUD2 1116 aa13.51□□□□□ -0.25
SSU72-202ENST00000359060 STRN4Q9NRL3 753 aa13.51□□□□□ -0.25
SSU72-202ENST00000359060 PA2G4Q9UQ80 394 aaKnown RBP13.51□□□□□ -0.25
SSU72-202ENST00000359060 USP32Q8NFA0 1604 aa13.51□□□□□ -0.25
SSU72-202ENST00000359060 NBPF7P0C2Y1 421 aaPredicted RBP13.5□□□□□ -0.25
SSU72-202ENST00000359060 XRCC6P12956 609 aaKnown RBP eCLIP13.5□□□□□ -0.25
SSU72-202ENST00000359060 GLRX3O76003 335 aaKnown RBP13.5□□□□□ -0.25
SSU72-202ENST00000359060 RAB3GAP1Q15042 981 aa13.5□□□□□ -0.25
SSU72-202ENST00000359060 DNAJC2Q99543 621 aaKnown RBP13.5□□□□□ -0.25
SSU72-202ENST00000359060 USP44Q9H0E7 712 aa13.5□□□□□ -0.25
SSU72-202ENST00000359060 ADAMTS13Q76LX8 1427 aa13.5□□□□□ -0.25
SSU72-202ENST00000359060 TOM1L2Q6ZVM7 507 aa13.5□□□□□ -0.25
SSU72-202ENST00000359060 MYD88Q99836 296 aa13.5□□□□□ -0.25
SSU72-202ENST00000359060 PRDM11Q9NQV5 511 aa13.5□□□□□ -0.25
SSU72-202ENST00000359060 BOLA2Q9H3K6 86 aa13.49□□□□□ -0.25
SSU72-202ENST00000359060 KIF24Q5T7B8 1368 aa13.49□□□□□ -0.25
SSU72-202ENST00000359060 TMX3Q96JJ7 454 aa13.49□□□□□ -0.25
SSU72-202ENST00000359060 PTCD1O75127 700 aaKnown RBP13.48□□□□□ -0.25
SSU72-202ENST00000359060 JAKMIP1Q96N16 626 aaKnown RBP13.48□□□□□ -0.25
SSU72-202ENST00000359060 SOS1Q07889 1333 aaPredicted RBP13.48□□□□□ -0.25
SSU72-202ENST00000359060 RNMTO43148 476 aaKnown RBP13.48□□□□□ -0.25
SSU72-202ENST00000359060 CHMLP26374 656 aa13.48□□□□□ -0.25
SSU72-202ENST00000359060 EIF4A1P60842 406 aaKnown RBP13.48□□□□□ -0.25
SSU72-202ENST00000359060 DDX17Q92841 729 aaKnown RBP13.48□□□□□ -0.25
SSU72-202ENST00000359060 HYPKQ9NX55 129 aa13.48□□□□□ -0.25
SSU72-202ENST00000359060 SPATA31D1Q6ZQQ2 1576 aa13.48□□□□□ -0.25
SSU72-202ENST00000359060 RNF20Q5VTR2 975 aa13.47□□□□□ -0.25
SSU72-202ENST00000359060 CDC42BPGQ6DT37 1551 aa13.47□□□□□ -0.25
SSU72-202ENST00000359060 CASTP20810 708 aaKnown RBP13.47□□□□□ -0.25
SSU72-202ENST00000359060 PRPF40BQ6NWY9 871 aaKnown RBP13.47□□□□□ -0.25
SSU72-202ENST00000359060 LARP1Q6PKG0 1096 aaKnown RBP13.47□□□□□ -0.25
SSU72-202ENST00000359060 SYTL4Q96C24 671 aaPredicted RBP13.47□□□□□ -0.25
SSU72-202ENST00000359060 FAM43AQ8N2R8 423 aa13.47□□□□□ -0.25
SSU72-202ENST00000359060 ADGRB2O60241 1585 aa13.47□□□□□ -0.25
SSU72-202ENST00000359060 ATP5J2-PTCD1G3V325 749 aa13.46□□□□□ -0.25
SSU72-202ENST00000359060 FIBPO43427 364 aa13.46□□□□□ -0.25
SSU72-202ENST00000359060 NFATC2IPQ8NCF5 419 aa13.46□□□□□ -0.25
SSU72-202ENST00000359060 GDPD2Q9HCC8 539 aa13.46□□□□□ -0.25
SSU72-202ENST00000359060 ATP6V1DQ9Y5K8 247 aa13.46□□□□□ -0.25
SSU72-202ENST00000359060 ECHDC1Q9NTX5 307 aa13.46□□□□□ -0.25
SSU72-202ENST00000359060 KSR2Q6VAB6 950 aa13.46□□□□□ -0.25
SSU72-202ENST00000359060 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.46□□□□□ -0.25
SSU72-202ENST00000359060 CYP46A1Q9Y6A2 500 aa13.46□□□□□ -0.26
SSU72-202ENST00000359060 COPS6Q7L5N1 327 aa13.45□□□□□ -0.26
SSU72-202ENST00000359060 XAGE3Q8WTP9 111 aa13.45□□□□□ -0.26
SSU72-202ENST00000359060 PHF14O94880 888 aa13.45□□□□□ -0.26
SSU72-202ENST00000359060 OVOS2A0A0J9YW53 1432 aa13.44□□□□□ -0.26
SSU72-202ENST00000359060 OVOS2Q6IE36 1432 aa13.44□□□□□ -0.26
SSU72-202ENST00000359060 FOSBP53539 338 aa13.44□□□□□ -0.26
SSU72-202ENST00000359060 UBE3BQ7Z3V4 1068 aa13.44□□□□□ -0.26
SSU72-202ENST00000359060 ANO8Q9HCE9 1232 aaPredicted RBP13.44□□□□□ -0.26
SSU72-202ENST00000359060 RBM27Q9P2N5 1060 aaKnown RBP13.44□□□□□ -0.26
SSU72-202ENST00000359060 PTPRUQ92729 1446 aa13.44□□□□□ -0.26
SSU72-202ENST00000359060 GRM8O00222 908 aa13.44□□□□□ -0.26
SSU72-202ENST00000359060 MBD3O95983 291 aa13.44□□□□□ -0.26
SSU72-202ENST00000359060 STK3Q13188 491 aa13.44□□□□□ -0.26
SSU72-202ENST00000359060 IFNL2Q8IZJ0 200 aa13.44□□□□□ -0.26
SSU72-202ENST00000359060 CCDC85AQ96PX6 553 aaPredicted RBP13.44□□□□□ -0.26
SSU72-202ENST00000359060 CCDC83Q8IWF9 413 aa13.43□□□□□ -0.26
SSU72-202ENST00000359060 C19orf44Q9H6X5 657 aa13.43□□□□□ -0.26
SSU72-202ENST00000359060 PDRG1Q9NUG6 133 aa13.43□□□□□ -0.26
SSU72-202ENST00000359060 BABAM1Q9NWV8 329 aa13.43□□□□□ -0.26
SSU72-202ENST00000359060 ISY1Q9ULR0 285 aaKnown RBP13.43□□□□□ -0.26
SSU72-202ENST00000359060 WDR33Q9C0J8 1336 aaKnown RBP13.43□□□□□ -0.26
SSU72-202ENST00000359060 SYCE3A1L190 88 aa13.43□□□□□ -0.26
SSU72-202ENST00000359060 KAT6BQ8WYB5 2073 aa13.43□□□□□ -0.26
SSU72-202ENST00000359060 TECPR2O15040 1411 aa13.43□□□□□ -0.26
SSU72-202ENST00000359060 USP31Q70CQ4 1352 aa13.43□□□□□ -0.26
SSU72-202ENST00000359060 A0A087WZG4 1122 aa13.42□□□□□ -0.26
SSU72-202ENST00000359060 H3BQV1 296 aa13.42□□□□□ -0.26
SSU72-202ENST00000359060 DTNBO60941 627 aa13.42□□□□□ -0.26
SSU72-202ENST00000359060 PKP1Q13835 747 aa13.42□□□□□ -0.26
SSU72-202ENST00000359060 CSPP1Q1MSJ5 1256 aa13.42□□□□□ -0.26
SSU72-202ENST00000359060 IFFO2Q5TF58 517 aa13.42□□□□□ -0.26
SSU72-202ENST00000359060 UNC5CLQ8IV45 518 aa13.42□□□□□ -0.26
SSU72-202ENST00000359060 FAM184AQ8NB25 1140 aa13.42□□□□□ -0.26
SSU72-202ENST00000359060 KIF20BQ96Q89 1820 aa13.42□□□□□ -0.26
SSU72-202ENST00000359060 KLHL40Q2TBA0 621 aa13.42□□□□□ -0.26
SSU72-202ENST00000359060 LINS1Q8NG48 757 aa13.42□□□□□ -0.26
SSU72-202ENST00000359060 PRAMEF22A3QJZ6 481 aa13.42□□□□□ -0.26
SSU72-202ENST00000359060 HIP1O00291 1037 aa13.42□□□□□ -0.26
SSU72-202ENST00000359060 ALDH1L1O75891 902 aa13.42□□□□□ -0.26
SSU72-202ENST00000359060 PSMA5P28066 241 aa13.42□□□□□ -0.26
SSU72-202ENST00000359060 ZRSR1Q15695 479 aaKnown RBP13.42□□□□□ -0.26
SSU72-202ENST00000359060 ANKRD13DQ6ZTN6 518 aa13.42□□□□□ -0.26
SSU72-202ENST00000359060 KLHDC4Q8TBB5 520 aa13.42□□□□□ -0.26
SSU72-202ENST00000359060 PALD1Q9ULE6 856 aa13.42□□□□□ -0.26
SSU72-202ENST00000359060 PROSER3Q2NL68 480 aa13.41□□□□□ -0.26
SSU72-202ENST00000359060 CRB1P82279 1406 aa13.41□□□□□ -0.26
SSU72-202ENST00000359060 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.41□□□□□ -0.26
SSU72-202ENST00000359060 CPA1P15085 419 aa13.41□□□□□ -0.26
SSU72-202ENST00000359060 MPNDQ8N594 471 aa13.41□□□□□ -0.26
SSU72-202ENST00000359060 SSH3Q8TE77 659 aa13.41□□□□□ -0.26
SSU72-202ENST00000359060 FMNL2Q96PY5 1086 aa13.41□□□□□ -0.26
SSU72-202ENST00000359060 BLOC1S2Q6QNY1 142 aa13.41□□□□□ -0.26
SSU72-202ENST00000359060 CHAMP1Q96JM3 812 aa13.41□□□□□ -0.26
SSU72-202ENST00000359060 TCEANC2Q96MN5 208 aa13.4□□□□□ -0.26
SSU72-202ENST00000359060 KIF2CQ99661 725 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms