RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 LMOD3Q0VAK6 560 aa13.52□□□□□ -0.25
CNOT3-202ENST00000358389 SYCP1Q15431 976 aa13.52□□□□□ -0.25
CNOT3-202ENST00000358389 NUTM1Q86Y26 1132 aa13.52□□□□□ -0.25
CNOT3-202ENST00000358389 MNS1Q8NEH6 495 aa13.52□□□□□ -0.25
CNOT3-202ENST00000358389 ARGLU1Q9NWB6 273 aaPredicted RBP13.52□□□□□ -0.25
CNOT3-202ENST00000358389 ERO1AQ96HE7 468 aa13.52□□□□□ -0.25
CNOT3-202ENST00000358389 MYO5CQ9NQX4 1742 aa13.52□□□□□ -0.25
CNOT3-202ENST00000358389 USP27XA6NNY8 438 aa13.51□□□□□ -0.25
CNOT3-202ENST00000358389 EIF2S2P20042 333 aaKnown RBP13.51□□□□□ -0.25
CNOT3-202ENST00000358389 SPG7Q9UQ90 795 aa13.51□□□□□ -0.25
CNOT3-202ENST00000358389 NRDCO43847 1150 aa13.51□□□□□ -0.25
CNOT3-202ENST00000358389 TMCO3Q6UWJ1 677 aa13.51□□□□□ -0.25
CNOT3-202ENST00000358389 CWC27Q6UX04 472 aaKnown RBP13.51□□□□□ -0.25
CNOT3-202ENST00000358389 SPATA32Q96LK8 384 aa13.51□□□□□ -0.25
CNOT3-202ENST00000358389 CCAR2Q8N163 923 aaKnown RBP13.51□□□□□ -0.25
CNOT3-202ENST00000358389 USP16Q9Y5T5 823 aa13.51□□□□□ -0.25
CNOT3-202ENST00000358389 MRVI1Q9Y6F6 885 aa13.51□□□□□ -0.25
CNOT3-202ENST00000358389 FOSBP53539 338 aa13.5□□□□□ -0.25
CNOT3-202ENST00000358389 KRBA2Q6ZNG9 492 aa13.5□□□□□ -0.25
CNOT3-202ENST00000358389 ARHGAP29Q52LW3 1261 aa13.5□□□□□ -0.25
CNOT3-202ENST00000358389 JAKMIP1Q96N16 626 aaKnown RBP13.5□□□□□ -0.25
CNOT3-202ENST00000358389 TPM4P67936 248 aa13.5□□□□□ -0.25
CNOT3-202ENST00000358389 UBXN4Q92575 508 aa13.5□□□□□ -0.25
CNOT3-202ENST00000358389 CCDC171Q6TFL3 1326 aa13.5□□□□□ -0.25
CNOT3-202ENST00000358389 CCDC69A6NI79 296 aa13.49□□□□□ -0.25
CNOT3-202ENST00000358389 RAD51AP2Q09MP3 1159 aa13.49□□□□□ -0.25
CNOT3-202ENST00000358389 MIS18AQ9NYP9 233 aa13.49□□□□□ -0.25
CNOT3-202ENST00000358389 GNAI2P04899 355 aa13.49□□□□□ -0.25
CNOT3-202ENST00000358389 CCDC144BQ3MJ40 725 aa13.49□□□□□ -0.25
CNOT3-202ENST00000358389 CCDC144CPQ8IYA2 1237 aa13.49□□□□□ -0.25
CNOT3-202ENST00000358389 FAM177A1Q8N128 213 aaPredicted RBP13.49□□□□□ -0.25
CNOT3-202ENST00000358389 RBM6P78332 1123 aaKnown RBP13.49□□□□□ -0.25
CNOT3-202ENST00000358389 UNC5CLQ8IV45 518 aa13.49□□□□□ -0.25
CNOT3-202ENST00000358389 TMEM87AQ8NBN3 555 aa13.49□□□□□ -0.25
CNOT3-202ENST00000358389 CCDC191Q8NCU4 936 aa13.49□□□□□ -0.25
CNOT3-202ENST00000358389 RASSF4Q9H2L5 321 aa13.49□□□□□ -0.25
CNOT3-202ENST00000358389 TOMM22Q9NS69 142 aa13.49□□□□□ -0.25
CNOT3-202ENST00000358389 PDRG1Q9NUG6 133 aa13.49□□□□□ -0.25
CNOT3-202ENST00000358389 LRRFIP2Q9Y608 721 aaKnown RBP13.49□□□□□ -0.25
CNOT3-202ENST00000358389 MSH6P52701 1360 aa13.49□□□□□ -0.25
CNOT3-202ENST00000358389 TTC37Q6PGP7 1564 aa13.48□□□□□ -0.25
CNOT3-202ENST00000358389 MADDQ8WXG6 1647 aa13.48□□□□□ -0.25
CNOT3-202ENST00000358389 STK3Q13188 491 aa13.48□□□□□ -0.25
CNOT3-202ENST00000358389 SNW1Q13573 536 aaKnown RBP13.48□□□□□ -0.25
CNOT3-202ENST00000358389 CHMP4CQ96CF2 233 aa13.48□□□□□ -0.25
CNOT3-202ENST00000358389 FMNL2Q96PY5 1086 aa13.48□□□□□ -0.25
CNOT3-202ENST00000358389 TRAPPC8Q9Y2L5 1435 aa13.48□□□□□ -0.25
CNOT3-202ENST00000358389 SYT10Q6XYQ8 523 aa13.48□□□□□ -0.25
CNOT3-202ENST00000358389 BRPF1P55201 1214 aaPredicted RBP13.48□□□□□ -0.25
CNOT3-202ENST00000358389 TTC6Q86TZ1 520 aa13.48□□□□□ -0.25
CNOT3-202ENST00000358389 FEZ2Q9UHY8 353 aaPredicted RBP13.48□□□□□ -0.25
CNOT3-202ENST00000358389 RAD50Q92878 1312 aa13.47□□□□□ -0.25
CNOT3-202ENST00000358389 FUCA2Q9BTY2 467 aa13.47□□□□□ -0.25
CNOT3-202ENST00000358389 EMILIN1Q9Y6C2 1016 aa13.47□□□□□ -0.25
CNOT3-202ENST00000358389 RGS12O14924 1447 aa13.47□□□□□ -0.25
CNOT3-202ENST00000358389 GTF2A1P52655 376 aaPredicted RBP13.47□□□□□ -0.25
CNOT3-202ENST00000358389 NSD2O96028 1365 aa13.47□□□□□ -0.25
CNOT3-202ENST00000358389 CCDC34Q96HJ3 373 aa13.47□□□□□ -0.25
CNOT3-202ENST00000358389 CWC15Q9P013 229 aaKnown RBP13.47□□□□□ -0.25
CNOT3-202ENST00000358389 SMC2O95347 1197 aa13.46□□□□□ -0.25
CNOT3-202ENST00000358389 PRPF40BQ6NWY9 871 aaKnown RBP13.46□□□□□ -0.25
CNOT3-202ENST00000358389 RUFY3Q7L099 469 aa13.46□□□□□ -0.25
CNOT3-202ENST00000358389 CABP1Q9NZU7 370 aa13.46□□□□□ -0.25
CNOT3-202ENST00000358389 MTMR6Q9Y217 621 aa13.46□□□□□ -0.25
CNOT3-202ENST00000358389 LMAN1P49257 510 aa13.46□□□□□ -0.25
CNOT3-202ENST00000358389 SKIDA1Q1XH10 827 aa13.46□□□□□ -0.25
CNOT3-202ENST00000358389 MCM10Q7L590 875 aa13.46□□□□□ -0.25
CNOT3-202ENST00000358389 LRRC8AQ8IWT6 810 aa13.46□□□□□ -0.25
CNOT3-202ENST00000358389 GOLGA6L1Q8N7Z2 621 aa13.46□□□□□ -0.25
CNOT3-202ENST00000358389 TCEANC2Q96MN5 208 aa13.46□□□□□ -0.25
CNOT3-202ENST00000358389 ARHGEF5Q12774 1597 aa13.46□□□□□ -0.25
CNOT3-202ENST00000358389 RNF20Q5VTR2 975 aa13.46□□□□□ -0.26
CNOT3-202ENST00000358389 NUTM2GQ5VZR2 741 aa13.46□□□□□ -0.26
CNOT3-202ENST00000358389 H3BQV1 296 aa13.45□□□□□ -0.26
CNOT3-202ENST00000358389 SURF6O75683 361 aaKnown RBP13.45□□□□□ -0.26
CNOT3-202ENST00000358389 LARGE1O95461 756 aa13.45□□□□□ -0.26
CNOT3-202ENST00000358389 HSP90B1P14625 803 aaKnown RBP13.45□□□□□ -0.26
CNOT3-202ENST00000358389 IFFO2Q5TF58 517 aa13.45□□□□□ -0.26
CNOT3-202ENST00000358389 SNX14Q9Y5W7 946 aa13.45□□□□□ -0.26
CNOT3-202ENST00000358389 CYP46A1Q9Y6A2 500 aa13.45□□□□□ -0.26
CNOT3-202ENST00000358389 MAST1Q9Y2H9 1570 aa13.45□□□□□ -0.26
CNOT3-202ENST00000358389 RPAP1Q9BWH6 1393 aaPredicted RBP13.45□□□□□ -0.26
CNOT3-202ENST00000358389 MYOM1P52179 1685 aa13.45□□□□□ -0.26
CNOT3-202ENST00000358389 A0A087WWV3 80 aa13.45□□□□□ -0.26
CNOT3-202ENST00000358389 URI1O94763 535 aaPredicted RBP13.45□□□□□ -0.26
CNOT3-202ENST00000358389 TXLNBQ8N3L3 684 aa13.45□□□□□ -0.26
CNOT3-202ENST00000358389 C14orf93Q9H972 538 aaKnown RBP13.45□□□□□ -0.26
CNOT3-202ENST00000358389 IQGAP1P46940 1657 aa13.45□□□□□ -0.26
CNOT3-202ENST00000358389 A0A1W2PP64 1363 aa13.45□□□□□ -0.26
CNOT3-202ENST00000358389 CYP2C19P33261 490 aa13.45□□□□□ -0.26
CNOT3-202ENST00000358389 RASEFQ8IZ41 740 aa13.45□□□□□ -0.26
CNOT3-202ENST00000358389 DDX19AQ9NUU7 478 aaKnown RBP13.45□□□□□ -0.26
CNOT3-202ENST00000358389 RTL1A6NKG5 1358 aa13.45□□□□□ -0.26
CNOT3-202ENST00000358389 ATP10AO60312 1499 aa13.45□□□□□ -0.26
CNOT3-202ENST00000358389 SAMD9LQ8IVG5 1584 aa13.45□□□□□ -0.26
CNOT3-202ENST00000358389 PTCH1Q13635 1447 aa13.45□□□□□ -0.26
CNOT3-202ENST00000358389 CLCN6P51797 869 aa13.45□□□□□ -0.26
CNOT3-202ENST00000358389 ZCCHC17Q9NP64 241 aaKnown RBP13.45□□□□□ -0.26
CNOT3-202ENST00000358389 DUOX2Q9NRD8 1548 aa13.44□□□□□ -0.26
CNOT3-202ENST00000358389 RNF17Q9BXT8 1623 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms