RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 STARD3NLO95772 234 aa19.67■□□□□ 0.74
TPM1-206ENST00000358278 SOS1Q07889 1333 aaPredicted RBP19.67■□□□□ 0.74
TPM1-206ENST00000358278 TUBGCP6Q96RT7 1819 aa19.66■□□□□ 0.74
TPM1-206ENST00000358278 UBR3Q6ZT12 1888 aa19.66■□□□□ 0.74
TPM1-206ENST00000358278 EIF2S2P20042 333 aaKnown RBP19.66■□□□□ 0.74
TPM1-206ENST00000358278 HMGB2P26583 209 aaKnown RBP19.66■□□□□ 0.74
TPM1-206ENST00000358278 LINC00116Q8NCU8 138 aa19.65■□□□□ 0.74
TPM1-206ENST00000358278 USP16Q9Y5T5 823 aa19.65■□□□□ 0.74
TPM1-206ENST00000358278 HDGFL1Q5TGJ6 251 aa19.65■□□□□ 0.74
TPM1-206ENST00000358278 NECTIN2Q92692 538 aa19.65■□□□□ 0.74
TPM1-206ENST00000358278 CYP19A1P11511 503 aaPredicted RBP19.64■□□□□ 0.73
TPM1-206ENST00000358278 CRKLP46109 303 aaKnown RBP19.63■□□□□ 0.73
TPM1-206ENST00000358278 CHMP4AQ9BY43 222 aa19.63■□□□□ 0.73
TPM1-206ENST00000358278 CNTNAP4Q9C0A0 1308 aa19.62■□□□□ 0.73
TPM1-206ENST00000358278 VAMP4O75379 141 aa19.62■□□□□ 0.73
TPM1-206ENST00000358278 CT47B1P0C2W7 299 aaPredicted RBP19.62■□□□□ 0.73
TPM1-206ENST00000358278 CCDC87Q9NVE4 849 aa19.62■□□□□ 0.73
TPM1-206ENST00000358278 QSER1Q2KHR3 1735 aa19.61■□□□□ 0.73
TPM1-206ENST00000358278 CCDC30Q5VVM6 783 aa19.61■□□□□ 0.73
TPM1-206ENST00000358278 AK7Q96M32 723 aa19.61■□□□□ 0.73
TPM1-206ENST00000358278 A1BGP04217 495 aa19.6■□□□□ 0.73
TPM1-206ENST00000358278 C4AP0C0L4 1744 aa19.6■□□□□ 0.73
TPM1-206ENST00000358278 STK31Q9BXU1 1019 aa19.59■□□□□ 0.73
TPM1-206ENST00000358278 ZBTB1Q9Y2K1 713 aa19.59■□□□□ 0.73
TPM1-206ENST00000358278 ERBB4Q15303 1308 aa19.59■□□□□ 0.73
TPM1-206ENST00000358278 GNPATO15228 680 aa19.59■□□□□ 0.73
TPM1-206ENST00000358278 CANXP27824 592 aaKnown RBP19.59■□□□□ 0.73
TPM1-206ENST00000358278 PIP4K2AP48426 406 aaPredicted RBP19.59■□□□□ 0.73
TPM1-206ENST00000358278 RC3H1Q5TC82 1133 aaKnown RBP19.59■□□□□ 0.73
TPM1-206ENST00000358278 CHPF2Q9P2E5 772 aa19.59■□□□□ 0.73
TPM1-206ENST00000358278 INTS5Q6P9B9 1019 aaKnown RBP19.58■□□□□ 0.72
TPM1-206ENST00000358278 ZNF428Q96B54 188 aa19.58■□□□□ 0.72
TPM1-206ENST00000358278 DBF4Q9UBU7 674 aaPredicted RBP19.58■□□□□ 0.72
TPM1-206ENST00000358278 ZNF330Q9Y3S2 320 aaPredicted RBP19.58■□□□□ 0.72
TPM1-206ENST00000358278 TCERG1O14776 1098 aaKnown RBP19.57■□□□□ 0.72
TPM1-206ENST00000358278 MYL6BP14649 208 aa19.57■□□□□ 0.72
TPM1-206ENST00000358278 NPM2Q86SE8 214 aaKnown RBP19.57■□□□□ 0.72
TPM1-206ENST00000358278 ZNF827Q17R98 1081 aa19.56■□□□□ 0.72
TPM1-206ENST00000358278 ANO8Q9HCE9 1232 aaPredicted RBP19.56■□□□□ 0.72
TPM1-206ENST00000358278 STK32BQ9NY57 414 aa19.56■□□□□ 0.72
TPM1-206ENST00000358278 NBPF26B4DH59 902 aa19.56■□□□□ 0.72
TPM1-206ENST00000358278 SOCS7O14512 581 aa19.56■□□□□ 0.72
TPM1-206ENST00000358278 ANXA1P04083 346 aa19.56■□□□□ 0.72
TPM1-206ENST00000358278 NBPF14Q5TI25 921 aa19.56■□□□□ 0.72
TPM1-206ENST00000358278 NBPF10Q6P3W6 841 aaKnown RBP19.56■□□□□ 0.72
TPM1-206ENST00000358278 NBPF15Q8N660 670 aa19.56■□□□□ 0.72
TPM1-206ENST00000358278 DDX21Q9NR30 783 aaKnown RBP eCLIP19.56■□□□□ 0.72
TPM1-206ENST00000358278 TFCP2L1Q9NZI6 479 aa19.56■□□□□ 0.72
TPM1-206ENST00000358278 RTCBQ9Y3I0 505 aaKnown RBP19.56■□□□□ 0.72
TPM1-206ENST00000358278 AKT1S1Q96B36 256 aa19.55■□□□□ 0.72
TPM1-206ENST00000358278 COL15A1P39059 1388 aa19.55■□□□□ 0.72
TPM1-206ENST00000358278 IL6STP40189 918 aaPredicted RBP19.54■□□□□ 0.72
TPM1-206ENST00000358278 PROSER3Q2NL68 480 aa19.54■□□□□ 0.72
TPM1-206ENST00000358278 SMC4Q9NTJ3 1288 aa19.54■□□□□ 0.72
TPM1-206ENST00000358278 BCORQ6W2J9 1755 aa19.54■□□□□ 0.72
TPM1-206ENST00000358278 RPS6KA4O75676 772 aa19.54■□□□□ 0.72
TPM1-206ENST00000358278 PHF14O94880 888 aa19.54■□□□□ 0.72
TPM1-206ENST00000358278 PDIA6Q15084 440 aa19.54■□□□□ 0.72
TPM1-206ENST00000358278 SLC15A2Q16348 729 aa19.54■□□□□ 0.72
TPM1-206ENST00000358278 ALDH1L2Q3SY69 923 aa19.54■□□□□ 0.72
TPM1-206ENST00000358278 BCL2L13Q9BXK5 485 aa19.54■□□□□ 0.72
TPM1-206ENST00000358278 HYPKQ9NX55 129 aa19.54■□□□□ 0.72
TPM1-206ENST00000358278 SLC4A2P04920 1241 aa19.53■□□□□ 0.72
TPM1-206ENST00000358278 RARSP54136 660 aaKnown RBP19.53■□□□□ 0.72
TPM1-206ENST00000358278 SSH1Q8WYL5 1049 aa19.53■□□□□ 0.72
TPM1-206ENST00000358278 ARFGEF2Q9Y6D5 1785 aa19.53■□□□□ 0.72
TPM1-206ENST00000358278 NUP98P52948 1817 aa19.52■□□□□ 0.72
TPM1-206ENST00000358278 SCN7AQ01118 1682 aa19.52■□□□□ 0.72
TPM1-206ENST00000358278 EIF5P55010 431 aaKnown RBP19.52■□□□□ 0.72
TPM1-206ENST00000358278 ARXQ96QS3 562 aa19.52■□□□□ 0.72
TPM1-206ENST00000358278 SSFA2P28290 1259 aa19.51■□□□□ 0.71
TPM1-206ENST00000358278 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.51■□□□□ 0.71
TPM1-206ENST00000358278 ADRA2BP18089 450 aa19.51■□□□□ 0.71
TPM1-206ENST00000358278 SMIM5Q71RC9 77 aa19.51■□□□□ 0.71
TPM1-206ENST00000358278 AMIGO3Q86WK7 504 aa19.51■□□□□ 0.71
TPM1-206ENST00000358278 RCAN3Q9UKA8 241 aa19.51■□□□□ 0.71
TPM1-206ENST00000358278 AIMP1Q12904 312 aaKnown RBP19.5■□□□□ 0.71
TPM1-206ENST00000358278 TRAPPC3LQ5T215 181 aa19.5■□□□□ 0.71
TPM1-206ENST00000358278 A0A087WZG4 1122 aa19.49■□□□□ 0.71
TPM1-206ENST00000358278 LRP10Q7Z4F1 713 aa19.49■□□□□ 0.71
TPM1-206ENST00000358278 PHAXQ9H814 394 aaKnown RBP19.49■□□□□ 0.71
TPM1-206ENST00000358278 ANKRD36CQ5JPF3 1778 aa19.49■□□□□ 0.71
TPM1-206ENST00000358278 KIF6Q6ZMV9 814 aa19.48■□□□□ 0.71
TPM1-206ENST00000358278 MRPL50Q8N5N7 158 aaKnown RBP19.48■□□□□ 0.71
TPM1-206ENST00000358278 FLAD1Q8NFF5 587 aa19.48■□□□□ 0.71
TPM1-206ENST00000358278 XAGE3Q8WTP9 111 aa19.48■□□□□ 0.71
TPM1-206ENST00000358278 MSH5O43196 834 aa19.48■□□□□ 0.71
TPM1-206ENST00000358278 RFC4P35249 363 aa19.48■□□□□ 0.71
TPM1-206ENST00000358278 FLIIQ13045 1269 aa19.48■□□□□ 0.71
TPM1-206ENST00000358278 COPS6Q7L5N1 327 aa19.48■□□□□ 0.71
TPM1-206ENST00000358278 DZIP3Q86Y13 1208 aaKnown RBP19.48■□□□□ 0.71
TPM1-206ENST00000358278 PNPLA7Q6ZV29 1317 aa19.47■□□□□ 0.71
TPM1-206ENST00000358278 AFDNP55196 1824 aaKnown RBP19.47■□□□□ 0.71
TPM1-206ENST00000358278 BCAR3O75815 825 aa19.47■□□□□ 0.71
TPM1-206ENST00000358278 G2E3Q7L622 706 aa19.47■□□□□ 0.71
TPM1-206ENST00000358278 ARHGEF1Q92888 912 aaKnown RBP19.47■□□□□ 0.71
TPM1-206ENST00000358278 TBC1D2BQ9UPU7 963 aa19.47■□□□□ 0.71
TPM1-206ENST00000358278 KIF16BQ96L93 1317 aa19.47■□□□□ 0.71
TPM1-206ENST00000358278 FKBP5Q13451 457 aaPredicted RBP19.46■□□□□ 0.71
TPM1-206ENST00000358278 TTLL7Q6ZT98 887 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms