RNA–Protein interactions for RNA: ENST00000357880.7

LINC01554-201, Transcript of long intergenic non-protein coding RNA 1554, humanhuman

TSL 1 (best)

Gene LINC01554, Length 804 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554-201ENST00000357880 THUMPD2Q9BTF0 503 aaKnown RBP23.25■■□□□ 1.31
LINC01554-201ENST00000357880 MIS18AQ9NYP9 233 aa23.25■■□□□ 1.31
LINC01554-201ENST00000357880 WDR43Q15061 677 aaKnown RBP eCLIP23.24■■□□□ 1.31
LINC01554-201ENST00000357880 CCDC146Q8IYE0 955 aa23.24■■□□□ 1.31
LINC01554-201ENST00000357880 TEX13AQ9BXU3 409 aaPredicted RBP23.23■■□□□ 1.31
LINC01554-201ENST00000357880 CD2APQ9Y5K6 639 aa23.23■■□□□ 1.31
LINC01554-201ENST00000357880 USP42Q9H9J4 1324 aaKnown RBP23.23■■□□□ 1.31
LINC01554-201ENST00000357880 ADAMTS8Q9UP79 889 aa23.22■■□□□ 1.31
LINC01554-201ENST00000357880 PRAMEF22A3QJZ6 481 aa23.21■■□□□ 1.31
LINC01554-201ENST00000357880 RIPK4P57078 832 aa23.21■■□□□ 1.31
LINC01554-201ENST00000357880 FKBP8Q14318 412 aa23.21■■□□□ 1.31
LINC01554-201ENST00000357880 PELP1Q8IZL8 1130 aaKnown RBP23.21■■□□□ 1.31
LINC01554-201ENST00000357880 COL15A1P39059 1388 aa23.21■■□□□ 1.31
LINC01554-201ENST00000357880 ZPR1O75312 459 aa23.2■■□□□ 1.3
LINC01554-201ENST00000357880 TMPOP42166 694 aaKnown RBP23.2■■□□□ 1.3
LINC01554-201ENST00000357880 GPR162Q16538 588 aa23.2■■□□□ 1.3
LINC01554-201ENST00000357880 USPL1Q5W0Q7 1092 aa23.2■■□□□ 1.3
LINC01554-201ENST00000357880 USP16Q9Y5T5 823 aa23.2■■□□□ 1.3
LINC01554-201ENST00000357880 A1BGP04217 495 aa23.19■■□□□ 1.3
LINC01554-201ENST00000357880 RRP7AQ9Y3A4 280 aaKnown RBP23.19■■□□□ 1.3
LINC01554-201ENST00000357880 SNRPA1P09661 255 aaKnown RBP23.18■■□□□ 1.3
LINC01554-201ENST00000357880 RUNDC1Q96C34 613 aa23.18■■□□□ 1.3
LINC01554-201ENST00000357880 PARP3Q9Y6F1 533 aa23.18■■□□□ 1.3
LINC01554-201ENST00000357880 EIF5P55010 431 aaKnown RBP23.17■■□□□ 1.3
LINC01554-201ENST00000357880 NEUROD2Q15784 382 aa23.17■■□□□ 1.3
LINC01554-201ENST00000357880 PNISRQ8TF01 805 aaKnown RBP23.17■■□□□ 1.3
LINC01554-201ENST00000357880 NARFQ9UHQ1 456 aa23.17■■□□□ 1.3
LINC01554-201ENST00000357880 ZNF330Q9Y3S2 320 aaPredicted RBP23.17■■□□□ 1.3
LINC01554-201ENST00000357880 PIP4K2AP48426 406 aaPredicted RBP23.15■■□□□ 1.3
LINC01554-201ENST00000357880 DDR1Q08345 913 aa23.14■■□□□ 1.29
LINC01554-201ENST00000357880 CCDC184Q52MB2 194 aa23.14■■□□□ 1.29
LINC01554-201ENST00000357880 BCL2L12Q9HB09 334 aa23.14■■□□□ 1.29
LINC01554-201ENST00000357880 A0A087WZG4 1122 aa23.13■■□□□ 1.29
LINC01554-201ENST00000357880 YBX3P16989 372 aaKnown RBP eCLIP23.13■■□□□ 1.29
LINC01554-201ENST00000357880 YY1P25490 414 aa23.13■■□□□ 1.29
LINC01554-201ENST00000357880 TM4SF1P30408 202 aa23.13■■□□□ 1.29
LINC01554-201ENST00000357880 IL6STP40189 918 aaPredicted RBP23.13■■□□□ 1.29
LINC01554-201ENST00000357880 LMOD3Q0VAK6 560 aa23.12■■□□□ 1.29
LINC01554-201ENST00000357880 WWC3Q9ULE0 1092 aa23.12■■□□□ 1.29
LINC01554-201ENST00000357880 TBC1D2BQ9UPU7 963 aa23.12■■□□□ 1.29
LINC01554-201ENST00000357880 KDM3BQ7LBC6 1761 aa23.12■■□□□ 1.29
LINC01554-201ENST00000357880 POLRMTO00411 1230 aaKnown RBP23.11■■□□□ 1.29
LINC01554-201ENST00000357880 EIF4A1P60842 406 aaKnown RBP23.11■■□□□ 1.29
LINC01554-201ENST00000357880 UTRNP46939 3433 aa23.1■■□□□ 1.29
LINC01554-201ENST00000357880 GOLGB1Q14789 3259 aaKnown RBP23.1■■□□□ 1.29
LINC01554-201ENST00000357880 ANP32CO43423 234 aa23.1■■□□□ 1.29
LINC01554-201ENST00000357880 NFIXQ14938 502 aa23.1■■□□□ 1.29
LINC01554-201ENST00000357880 NPM2Q86SE8 214 aaKnown RBP23.1■■□□□ 1.29
LINC01554-201ENST00000357880 TSPYL4Q9UJ04 414 aa23.1■■□□□ 1.29
LINC01554-201ENST00000357880 TRIM35Q9UPQ4 493 aa23.1■■□□□ 1.29
LINC01554-201ENST00000357880 C10orf71Q711Q0 1435 aa23.09■■□□□ 1.29
LINC01554-201ENST00000357880 GIGYF1O75420 1035 aaPredicted RBP23.09■■□□□ 1.29
LINC01554-201ENST00000357880 KIF13BQ9NQT8 1826 aa23.08■■□□□ 1.29
LINC01554-201ENST00000357880 A0A0G2JLW4 131 aa23.08■■□□□ 1.29
LINC01554-201ENST00000357880 BICDL1Q6ZP65 573 aa23.08■■□□□ 1.29
LINC01554-201ENST00000357880 NBPF26B4DH59 902 aa23.07■■□□□ 1.28
LINC01554-201ENST00000357880 TGFB2P61812 414 aa23.07■■□□□ 1.28
LINC01554-201ENST00000357880 NBPF10Q6P3W6 841 aaKnown RBP23.07■■□□□ 1.28
LINC01554-201ENST00000357880 NBPF15Q8N660 670 aa23.07■■□□□ 1.28
LINC01554-201ENST00000357880 PXDNLA1KZ92 1463 aa23.06■■□□□ 1.28
LINC01554-201ENST00000357880 DZIP3Q86Y13 1208 aaKnown RBP23.06■■□□□ 1.28
LINC01554-201ENST00000357880 N4BP2Q86UW6 1770 aaPredicted RBP23.05■■□□□ 1.28
LINC01554-201ENST00000357880 APAF1O14727 1248 aa23.05■■□□□ 1.28
LINC01554-201ENST00000357880 GRIN3BO60391 1043 aa23.05■■□□□ 1.28
LINC01554-201ENST00000357880 CAMTA2O94983 1202 aa23.05■■□□□ 1.28
LINC01554-201ENST00000357880 DPEP1P16444 411 aa23.05■■□□□ 1.28
LINC01554-201ENST00000357880 TBC1D9BQ66K14 1250 aa23.05■■□□□ 1.28
LINC01554-201ENST00000357880 SERPINB2P05120 415 aa23.04■■□□□ 1.28
LINC01554-201ENST00000357880 BABAM1Q9NWV8 329 aa23.04■■□□□ 1.28
LINC01554-201ENST00000357880 LAS1LQ9Y4W2 734 aaKnown RBP23.04■■□□□ 1.28
LINC01554-201ENST00000357880 KIAA1551Q9HCM1 1747 aa23.04■■□□□ 1.28
LINC01554-201ENST00000357880 LAMB4A4D0S4 1761 aa23.03■■□□□ 1.28
LINC01554-201ENST00000357880 SCN7AQ01118 1682 aa23.03■■□□□ 1.28
LINC01554-201ENST00000357880 CHD4Q14839 1912 aa23.02■■□□□ 1.28
LINC01554-201ENST00000357880 MRS2Q9HD23 443 aa23.02■■□□□ 1.28
LINC01554-201ENST00000357880 AFDNP55196 1824 aaKnown RBP23.01■■□□□ 1.27
LINC01554-201ENST00000357880 CHL1O00533 1208 aa23.01■■□□□ 1.27
LINC01554-201ENST00000357880 NGEFQ8N5V2 710 aa23.01■■□□□ 1.27
LINC01554-201ENST00000357880 KCNA3P22001 575 aa23■■□□□ 1.27
LINC01554-201ENST00000357880 MYL6BP14649 208 aa22.99■■□□□ 1.27
LINC01554-201ENST00000357880 CHRNA5P30532 468 aa22.99■■□□□ 1.27
LINC01554-201ENST00000357880 BCS1LQ9Y276 419 aa22.99■■□□□ 1.27
LINC01554-201ENST00000357880 SENP3-EIF4A1A0A087X0R7 540 aa22.98■■□□□ 1.27
LINC01554-201ENST00000357880 EIF2S2P20042 333 aaKnown RBP22.98■■□□□ 1.27
LINC01554-201ENST00000357880 SETDB2Q96T68 719 aa22.98■■□□□ 1.27
LINC01554-201ENST00000357880 NRXN2Q9P2S2 1712 aa22.98■■□□□ 1.27
LINC01554-201ENST00000357880 BCORQ6W2J9 1755 aa22.98■■□□□ 1.27
LINC01554-201ENST00000357880 KRT24Q2M2I5 525 aa22.97■■□□□ 1.27
LINC01554-201ENST00000357880 CLEC4GQ6UXB4 293 aa22.96■■□□□ 1.27
LINC01554-201ENST00000357880 CCDC24Q8N4L8 307 aa22.96■■□□□ 1.27
LINC01554-201ENST00000357880 CARMIL3Q8ND23 1372 aa22.96■■□□□ 1.27
LINC01554-201ENST00000357880 HLFQ16534 295 aa22.95■■□□□ 1.26
LINC01554-201ENST00000357880 NECTIN2Q92692 538 aa22.95■■□□□ 1.26
LINC01554-201ENST00000357880 CFAP44Q96MT7 982 aa22.95■■□□□ 1.26
LINC01554-201ENST00000357880 PIM2Q9P1W9 311 aa22.95■■□□□ 1.26
LINC01554-201ENST00000357880 ZNF652Q9Y2D9 606 aa22.95■■□□□ 1.26
LINC01554-201ENST00000357880 TTLL7Q6ZT98 887 aa22.94■■□□□ 1.26
LINC01554-201ENST00000357880 PRR5LQ6MZQ0 368 aa22.93■■□□□ 1.26
LINC01554-201ENST00000357880 MBIPQ9NS73 344 aa22.93■■□□□ 1.26
LINC01554-201ENST00000357880 BRCA1P38398 1863 aaKnown RBP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms