RNA–Protein interactions for RNA: ENST00000357714.5

CD46-204, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-204ENST00000357714 BCL11BQ9C0K0 894 aaPredicted RBP9.19□□□□□ -0.94
CD46-204ENST00000357714 LRRFIP2Q9Y608 721 aaKnown RBP9.19□□□□□ -0.94
CD46-204ENST00000357714 ATP7BP35670 1465 aa9.19□□□□□ -0.94
CD46-204ENST00000357714 MLH3Q9UHC1 1453 aa9.19□□□□□ -0.94
CD46-204ENST00000357714 FRMPD1Q5SYB0 1578 aa9.19□□□□□ -0.94
CD46-204ENST00000357714 CCDC83Q8IWF9 413 aa9.19□□□□□ -0.94
CD46-204ENST00000357714 NUDT16Q96DE0 195 aaKnown RBP9.19□□□□□ -0.94
CD46-204ENST00000357714 KCNF1Q9H3M0 494 aa9.19□□□□□ -0.94
CD46-204ENST00000357714 AP5Z1O43299 807 aa9.18□□□□□ -0.94
CD46-204ENST00000357714 KIF20AO95235 890 aa9.18□□□□□ -0.94
CD46-204ENST00000357714 STAP2Q9UGK3 403 aa9.18□□□□□ -0.94
CD46-204ENST00000357714 SNX14Q9Y5W7 946 aa9.18□□□□□ -0.94
CD46-204ENST00000357714 SURF6O75683 361 aaKnown RBP9.18□□□□□ -0.94
CD46-204ENST00000357714 CPA1P15085 419 aa9.18□□□□□ -0.94
CD46-204ENST00000357714 CASTP20810 708 aaKnown RBP9.18□□□□□ -0.94
CD46-204ENST00000357714 PTGS1P23219 599 aa9.18□□□□□ -0.94
CD46-204ENST00000357714 FLIIQ13045 1269 aa9.18□□□□□ -0.94
CD46-204ENST00000357714 CCDC61Q9Y6R9 512 aa9.18□□□□□ -0.94
CD46-204ENST00000357714 MAP2P11137 1827 aaKnown RBP9.18□□□□□ -0.94
CD46-204ENST00000357714 FOXO3O43524 673 aa9.18□□□□□ -0.94
CD46-204ENST00000357714 GJB2P29033 226 aa9.18□□□□□ -0.94
CD46-204ENST00000357714 CAMK4Q16566 473 aa9.18□□□□□ -0.94
CD46-204ENST00000357714 CWC27Q6UX04 472 aaKnown RBP9.18□□□□□ -0.94
CD46-204ENST00000357714 RUFY3Q7L099 469 aa9.18□□□□□ -0.94
CD46-204ENST00000357714 RASEFQ8IZ41 740 aa9.18□□□□□ -0.94
CD46-204ENST00000357714 RAD50Q92878 1312 aa9.17□□□□□ -0.94
CD46-204ENST00000357714 VGLL3A8MV65 326 aa9.17□□□□□ -0.94
CD46-204ENST00000357714 UBTFL1P0CB47 393 aaPredicted RBP9.17□□□□□ -0.94
CD46-204ENST00000357714 HSP90AB2PQ58FF8 381 aa9.17□□□□□ -0.94
CD46-204ENST00000357714 C16orf45Q96MC5 204 aaPredicted RBP9.17□□□□□ -0.94
CD46-204ENST00000357714 FUCA2Q9BTY2 467 aa9.17□□□□□ -0.94
CD46-204ENST00000357714 SPG7Q9UQ90 795 aa9.17□□□□□ -0.94
CD46-204ENST00000357714 DIP2BQ9P265 1576 aa9.17□□□□□ -0.94
CD46-204ENST00000357714 KIF20BQ96Q89 1820 aa9.17□□□□□ -0.94
CD46-204ENST00000357714 GOLGA6L4A6NEF3 574 aa9.17□□□□□ -0.94
CD46-204ENST00000357714 SGSM2O43147 1006 aa9.17□□□□□ -0.94
CD46-204ENST00000357714 TXNDC2Q86VQ3 553 aa9.17□□□□□ -0.94
CD46-204ENST00000357714 FAM200AQ8TCP9 573 aa9.17□□□□□ -0.94
CD46-204ENST00000357714 PIK3C2BO00750 1634 aa9.17□□□□□ -0.94
CD46-204ENST00000357714 EPB41L2O43491 1005 aaKnown RBP9.16□□□□□ -0.94
CD46-204ENST00000357714 ZNF771Q7L3S4 317 aaPredicted RBP9.16□□□□□ -0.94
CD46-204ENST00000357714 CCDC186Q7Z3E2 898 aa9.16□□□□□ -0.94
CD46-204ENST00000357714 CNTROBQ8N137 903 aa9.16□□□□□ -0.94
CD46-204ENST00000357714 ZBTB22O15209 634 aa9.16□□□□□ -0.94
CD46-204ENST00000357714 MAP3K11Q16584 847 aa9.16□□□□□ -0.94
CD46-204ENST00000357714 FERMT3Q86UX7 667 aa9.16□□□□□ -0.94
CD46-204ENST00000357714 LUZP1Q86V48 1076 aa9.16□□□□□ -0.94
CD46-204ENST00000357714 TTC14Q96N46 770 aa9.16□□□□□ -0.94
CD46-204ENST00000357714 NUP62CLQ9H1M0 184 aa9.16□□□□□ -0.94
CD46-204ENST00000357714 SIGLEC1Q9BZZ2 1709 aa9.16□□□□□ -0.94
CD46-204ENST00000357714 LARGE1O95461 756 aa9.16□□□□□ -0.94
CD46-204ENST00000357714 MAPK8IP2Q13387 824 aaPredicted RBP9.16□□□□□ -0.94
CD46-204ENST00000357714 CCDC30Q5VVM6 783 aa9.16□□□□□ -0.94
CD46-204ENST00000357714 CKAP2LQ8IYA6 745 aa9.16□□□□□ -0.94
CD46-204ENST00000357714 DDX54Q8TDD1 881 aaKnown RBP9.16□□□□□ -0.94
CD46-204ENST00000357714 ANKRD7Q92527 254 aa9.16□□□□□ -0.94
CD46-204ENST00000357714 IL17RAQ96F46 866 aa9.16□□□□□ -0.94
CD46-204ENST00000357714 JAKMIP1Q96N16 626 aaKnown RBP9.16□□□□□ -0.94
CD46-204ENST00000357714 TRIM5Q9C035 493 aa9.16□□□□□ -0.94
CD46-204ENST00000357714 PDRG1Q9NUG6 133 aa9.16□□□□□ -0.94
CD46-204ENST00000357714 MTMR6Q9Y217 621 aa9.16□□□□□ -0.94
CD46-204ENST00000357714 SOS1Q07889 1333 aaPredicted RBP9.15□□□□□ -0.94
CD46-204ENST00000357714 NUTM2FA1L443 756 aa9.15□□□□□ -0.95
CD46-204ENST00000357714 TNNT1P13805 278 aa9.15□□□□□ -0.95
CD46-204ENST00000357714 KRT85P78386 507 aa9.15□□□□□ -0.95
CD46-204ENST00000357714 LRMPQ12912 555 aa9.15□□□□□ -0.95
CD46-204ENST00000357714 OS9Q13438 667 aaPredicted RBP9.15□□□□□ -0.95
CD46-204ENST00000357714 MTHFSDQ2M296 383 aaKnown RBP9.15□□□□□ -0.95
CD46-204ENST00000357714 FEZ1Q99689 392 aa9.15□□□□□ -0.95
CD46-204ENST00000357714 LSG1Q9H089 658 aaKnown RBP9.15□□□□□ -0.95
CD46-204ENST00000357714 AOX1Q06278 1338 aa9.15□□□□□ -0.95
CD46-204ENST00000357714 CLTCQ00610 1675 aaKnown RBP9.15□□□□□ -0.95
CD46-204ENST00000357714 CTIFO43310 598 aaKnown RBP9.14□□□□□ -0.95
CD46-204ENST00000357714 KCNJ4P48050 445 aa9.14□□□□□ -0.95
CD46-204ENST00000357714 TYRO3Q06418 890 aa9.14□□□□□ -0.95
CD46-204ENST00000357714 LARP1BQ659C4 914 aaKnown RBP9.14□□□□□ -0.95
CD46-204ENST00000357714 PRPF40BQ6NWY9 871 aaKnown RBP9.14□□□□□ -0.95
CD46-204ENST00000357714 PPP1R42Q7Z4L9 355 aa9.14□□□□□ -0.95
CD46-204ENST00000357714 RHPN1Q8TCX5 695 aa9.14□□□□□ -0.95
CD46-204ENST00000357714 ZNF592Q92610 1267 aa9.14□□□□□ -0.95
CD46-204ENST00000357714 TNMDQ9H2S6 317 aa9.14□□□□□ -0.95
CD46-204ENST00000357714 CGNQ9P2M7 1197 aaKnown RBP9.14□□□□□ -0.95
CD46-204ENST00000357714 NAP1L2Q9ULW6 460 aaPredicted RBP9.14□□□□□ -0.95
CD46-204ENST00000357714 ALKQ9UM73 1620 aa9.14□□□□□ -0.95
CD46-204ENST00000357714 FAM173BQ6P4H8 233 aa9.14□□□□□ -0.95
CD46-204ENST00000357714 NECAB1Q8N987 351 aa9.14□□□□□ -0.95
CD46-204ENST00000357714 CCDC112Q8NEF3 446 aa9.14□□□□□ -0.95
CD46-204ENST00000357714 HYPKQ9NX55 129 aa9.14□□□□□ -0.95
CD46-204ENST00000357714 OGFRQ9NZT2 677 aa9.14□□□□□ -0.95
CD46-204ENST00000357714 CYP46A1Q9Y6A2 500 aa9.14□□□□□ -0.95
CD46-204ENST00000357714 TCHHQ07283 1943 aa9.14□□□□□ -0.95
CD46-204ENST00000357714 NEO1Q92859 1461 aa9.14□□□□□ -0.95
CD46-204ENST00000357714 RICTORQ6R327 1708 aa9.14□□□□□ -0.95
CD46-204ENST00000357714 SRGAP3O43295 1099 aa9.14□□□□□ -0.95
CD46-204ENST00000357714 NCBP1Q09161 790 aaKnown RBP9.14□□□□□ -0.95
CD46-204ENST00000357714 ZSCAN31Q96LW9 406 aaPredicted RBP9.14□□□□□ -0.95
CD46-204ENST00000357714 USP44Q9H0E7 712 aa9.14□□□□□ -0.95
CD46-204ENST00000357714 KIF13AQ9H1H9 1805 aa9.13□□□□□ -0.95
CD46-204ENST00000357714 DLG5Q8TDM6 1919 aa9.13□□□□□ -0.95
CD46-204ENST00000357714 CRB1P82279 1406 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms