RNA–Protein interactions for RNA: ENST00000357395.7

SYNE2-203, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 21,555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-203ENST00000357395 HDGFL2Q7Z4V5 671 aaPredicted RBP5.39□□□□□ -1.55
SYNE2-203ENST00000357395 CUX1P39880 1505 aa5.39□□□□□ -1.55
SYNE2-203ENST00000357395 HSF2BPO75031 334 aa5.39□□□□□ -1.55
SYNE2-203ENST00000357395 MTUS1Q9ULD2 1270 aa5.39□□□□□ -1.55
SYNE2-203ENST00000357395 NACADO15069 1562 aa5.39□□□□□ -1.55
SYNE2-203ENST00000357395 SPECC1Q5M775 1068 aa5.39□□□□□ -1.55
SYNE2-203ENST00000357395 ARHGAP18Q8N392 663 aa5.39□□□□□ -1.55
SYNE2-203ENST00000357395 OTUD6BQ8N6M0 293 aa5.39□□□□□ -1.55
SYNE2-203ENST00000357395 UBE2HP62256 183 aa5.39□□□□□ -1.55
SYNE2-203ENST00000357395 PPP4R3BQ5MIZ7 849 aa5.39□□□□□ -1.55
SYNE2-203ENST00000357395 LCA5Q86VQ0 697 aa5.39□□□□□ -1.55
SYNE2-203ENST00000357395 CAPZA3Q96KX2 299 aa5.39□□□□□ -1.55
SYNE2-203ENST00000357395 CNTROBQ8N137 903 aa5.39□□□□□ -1.55
SYNE2-203ENST00000357395 RASAL2Q9UJF2 1139 aa5.39□□□□□ -1.55
SYNE2-203ENST00000357395 DRC3Q9H069 523 aa5.39□□□□□ -1.55
SYNE2-203ENST00000357395 SSBP05455 408 aaKnown RBP eCLIP5.39□□□□□ -1.55
SYNE2-203ENST00000357395 MAP3K7CLP57077 242 aa5.39□□□□□ -1.55
SYNE2-203ENST00000357395 SETDB1Q15047 1291 aa5.39□□□□□ -1.55
SYNE2-203ENST00000357395 VIMP08670 466 aaKnown RBP5.39□□□□□ -1.55
SYNE2-203ENST00000357395 CCDC152Q4G0S7 254 aa5.39□□□□□ -1.55
SYNE2-203ENST00000357395 EFCAB13Q8IY85 973 aa5.39□□□□□ -1.55
SYNE2-203ENST00000357395 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.39□□□□□ -1.55
SYNE2-203ENST00000357395 MRPS25P82663 173 aaKnown RBP5.39□□□□□ -1.55
SYNE2-203ENST00000357395 PHLDB3Q6NSJ2 640 aa5.39□□□□□ -1.55
SYNE2-203ENST00000357395 ANAPC15P60006 121 aa5.39□□□□□ -1.55
SYNE2-203ENST00000357395 WDR63Q8IWG1 891 aa5.39□□□□□ -1.55
SYNE2-203ENST00000357395 NBPF6Q5VWK0 638 aa5.39□□□□□ -1.55
SYNE2-203ENST00000357395 NBPF5PQ86XG9 351 aaPredicted RBP5.39□□□□□ -1.55
SYNE2-203ENST00000357395 NBPF4Q96M43 638 aa5.39□□□□□ -1.55
SYNE2-203ENST00000357395 FLOT1O75955 427 aa5.39□□□□□ -1.55
SYNE2-203ENST00000357395 CCDC27Q2M243 656 aa5.39□□□□□ -1.55
SYNE2-203ENST00000357395 MPNDQ8N594 471 aa5.39□□□□□ -1.55
SYNE2-203ENST00000357395 BATF3Q9NR55 127 aa5.39□□□□□ -1.55
SYNE2-203ENST00000357395 MVPQ14764 893 aaKnown RBP5.38□□□□□ -1.55
SYNE2-203ENST00000357395 NRDE2Q9H7Z3 1164 aa5.38□□□□□ -1.55
SYNE2-203ENST00000357395 TUBA8Q9NY65 449 aaPredicted RBP5.38□□□□□ -1.55
SYNE2-203ENST00000357395 RAB3IL1Q8TBN0 382 aa5.38□□□□□ -1.55
SYNE2-203ENST00000357395 RRP36Q96EU6 259 aaKnown RBP5.38□□□□□ -1.55
SYNE2-203ENST00000357395 RAB3GAP2Q9H2M9 1393 aa5.38□□□□□ -1.55
SYNE2-203ENST00000357395 CBX1P83916 185 aa5.38□□□□□ -1.55
SYNE2-203ENST00000357395 RUFY4Q6ZNE9 571 aa5.38□□□□□ -1.55
SYNE2-203ENST00000357395 HNRNPMP52272 730 aaKnown RBP eCLIP5.38□□□□□ -1.55
SYNE2-203ENST00000357395 GOLGA1Q92805 767 aa5.38□□□□□ -1.55
SYNE2-203ENST00000357395 INTS4Q96HW7 963 aaKnown RBP5.38□□□□□ -1.55
SYNE2-203ENST00000357395 NUP62CLQ9H1M0 184 aa5.38□□□□□ -1.55
SYNE2-203ENST00000357395 NBPF8Q3BBV2 869 aa5.38□□□□□ -1.55
SYNE2-203ENST00000357395 UPF3BQ9BZI7 483 aaKnown RBP5.38□□□□□ -1.55
SYNE2-203ENST00000357395 SAMD15Q9P1V8 674 aa5.38□□□□□ -1.55
SYNE2-203ENST00000357395 ANAPC4Q9UJX5 808 aa5.38□□□□□ -1.55
SYNE2-203ENST00000357395 CASQ1P31415 396 aa5.38□□□□□ -1.55
SYNE2-203ENST00000357395 A0A1B0GW55 424 aa5.38□□□□□ -1.55
SYNE2-203ENST00000357395 GOLGA6CA6NDK9 693 aa5.38□□□□□ -1.55
SYNE2-203ENST00000357395 GOLGA6BA6NDN3 693 aa5.38□□□□□ -1.55
SYNE2-203ENST00000357395 GOLGA6DP0CG33 693 aa5.38□□□□□ -1.55
SYNE2-203ENST00000357395 DUX4L2P0CJ85 424 aa5.38□□□□□ -1.55
SYNE2-203ENST00000357395 DUX4L3P0CJ86 424 aa5.38□□□□□ -1.55
SYNE2-203ENST00000357395 DUX4L4P0CJ87 422 aa5.38□□□□□ -1.55
SYNE2-203ENST00000357395 DUX4L5P0CJ88 424 aa5.38□□□□□ -1.55
SYNE2-203ENST00000357395 DUX4L6P0CJ89 424 aa5.38□□□□□ -1.55
SYNE2-203ENST00000357395 DUX4L7P0CJ90 424 aa5.38□□□□□ -1.55
SYNE2-203ENST00000357395 KIAA1524Q8TCG1 905 aa5.38□□□□□ -1.55
SYNE2-203ENST00000357395 GOLGA6AQ9NYA3 693 aa5.38□□□□□ -1.55
SYNE2-203ENST00000357395 IMPACTQ9P2X3 320 aa5.38□□□□□ -1.55
SYNE2-203ENST00000357395 DUX4Q9UBX2 424 aa5.38□□□□□ -1.55
SYNE2-203ENST00000357395 RNASELQ05823 741 aaKnown RBP5.38□□□□□ -1.55
SYNE2-203ENST00000357395 MORC1Q86VD1 984 aa5.38□□□□□ -1.55
SYNE2-203ENST00000357395 MYRIPQ8NFW9 859 aa5.38□□□□□ -1.55
SYNE2-203ENST00000357395 VAV2P52735 878 aa5.38□□□□□ -1.55
SYNE2-203ENST00000357395 ABCC11Q96J66 1382 aa5.38□□□□□ -1.55
SYNE2-203ENST00000357395 CCDC77Q9BR77 488 aa5.38□□□□□ -1.55
SYNE2-203ENST00000357395 STX1AQ16623 288 aa5.38□□□□□ -1.55
SYNE2-203ENST00000357395 NBPF10Q6P3W6 841 aaKnown RBP5.38□□□□□ -1.55
SYNE2-203ENST00000357395 ERICH2A1L162 156 aa5.37□□□□□ -1.55
SYNE2-203ENST00000357395 CEP63Q96MT8 703 aa5.37□□□□□ -1.55
SYNE2-203ENST00000357395 FOXD4L1Q9NU39 408 aa5.37□□□□□ -1.55
SYNE2-203ENST00000357395 ZNF500O60304 480 aaPredicted RBP5.37□□□□□ -1.55
SYNE2-203ENST00000357395 ANKRD45Q5TZF3 282 aa5.37□□□□□ -1.55
SYNE2-203ENST00000357395 JAKMIP1Q96N16 626 aaKnown RBP5.37□□□□□ -1.55
SYNE2-203ENST00000357395 CCDC170Q8IYT3 715 aa5.37□□□□□ -1.55
SYNE2-203ENST00000357395 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.37□□□□□ -1.55
SYNE2-203ENST00000357395 LRRC27Q9C0I9 530 aa5.37□□□□□ -1.55
SYNE2-203ENST00000357395 GPRASP1Q5JY77 1395 aa5.37□□□□□ -1.55
SYNE2-203ENST00000357395 EIF2S1P05198 315 aaKnown RBP5.37□□□□□ -1.55
SYNE2-203ENST00000357395 PIP4K2CQ8TBX8 421 aa5.37□□□□□ -1.55
SYNE2-203ENST00000357395 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.37□□□□□ -1.55
SYNE2-203ENST00000357395 SCLT1Q96NL6 688 aa5.37□□□□□ -1.55
SYNE2-203ENST00000357395 CAMK4Q16566 473 aa5.37□□□□□ -1.55
SYNE2-203ENST00000357395 BANK1Q8NDB2 785 aa5.37□□□□□ -1.55
SYNE2-203ENST00000357395 TAF4BQ92750 862 aa5.37□□□□□ -1.55
SYNE2-203ENST00000357395 HMG20BQ9P0W2 317 aa5.37□□□□□ -1.55
SYNE2-203ENST00000357395 FHOD3Q2V2M9 1422 aa5.37□□□□□ -1.55
SYNE2-203ENST00000357395 DMTNQ08495 405 aa5.37□□□□□ -1.55
SYNE2-203ENST00000357395 NEDD9Q14511 834 aa5.37□□□□□ -1.55
SYNE2-203ENST00000357395 PPP1R12CQ9BZL4 782 aa5.37□□□□□ -1.55
SYNE2-203ENST00000357395 LMNB1P20700 586 aa5.37□□□□□ -1.55
SYNE2-203ENST00000357395 DRP2Q13474 957 aa5.37□□□□□ -1.55
SYNE2-203ENST00000357395 CCDC92Q53HC0 331 aaPredicted RBP5.37□□□□□ -1.55
SYNE2-203ENST00000357395 NAP1L1P55209 391 aaKnown RBP5.37□□□□□ -1.55
SYNE2-203ENST00000357395 TUBB6Q9BUF5 446 aa5.37□□□□□ -1.55
SYNE2-203ENST00000357395 SH3GL3Q99963 347 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms