RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 TOP1P11387 765 aaKnown RBP18.23■□□□□ 0.51
TRAPPC11-202ENST00000357207 EVI5LQ96CN4 794 aa18.23■□□□□ 0.51
TRAPPC11-202ENST00000357207 GBP3Q9H0R5 595 aa18.23■□□□□ 0.51
TRAPPC11-202ENST00000357207 ZHX1Q9UKY1 873 aaPredicted RBP18.23■□□□□ 0.51
TRAPPC11-202ENST00000357207 ANKRD36BQ8N2N9 1353 aa18.23■□□□□ 0.51
TRAPPC11-202ENST00000357207 KIAA0754O94854 1291 aa18.23■□□□□ 0.51
TRAPPC11-202ENST00000357207 FSIP1Q8NA03 581 aa18.23■□□□□ 0.51
TRAPPC11-202ENST00000357207 WASF1Q92558 559 aa18.23■□□□□ 0.51
TRAPPC11-202ENST00000357207 SPINK5Q9NQ38 1064 aaPredicted RBP18.23■□□□□ 0.51
TRAPPC11-202ENST00000357207 ZBTB40Q9NUA8 1239 aa18.23■□□□□ 0.51
TRAPPC11-202ENST00000357207 CCAR1Q8IX12 1150 aaKnown RBP18.22■□□□□ 0.51
TRAPPC11-202ENST00000357207 CCDC191Q8NCU4 936 aa18.22■□□□□ 0.51
TRAPPC11-202ENST00000357207 CCDC43Q96MW1 224 aaKnown RBP18.22■□□□□ 0.51
TRAPPC11-202ENST00000357207 KDM2BQ8NHM5 1336 aa18.22■□□□□ 0.51
TRAPPC11-202ENST00000357207 SPDYE4A6NLX3 237 aa18.22■□□□□ 0.51
TRAPPC11-202ENST00000357207 PPP1R42Q7Z4L9 355 aa18.22■□□□□ 0.51
TRAPPC11-202ENST00000357207 USP48Q86UV5 1035 aa18.22■□□□□ 0.51
TRAPPC11-202ENST00000357207 THEMISQ8N1K5 641 aaPredicted RBP18.21■□□□□ 0.51
TRAPPC11-202ENST00000357207 ESYT1Q9BSJ8 1104 aa18.21■□□□□ 0.51
TRAPPC11-202ENST00000357207 PODXL2Q9NZ53 605 aa18.21■□□□□ 0.51
TRAPPC11-202ENST00000357207 NUP160Q12769 1436 aa18.21■□□□□ 0.51
TRAPPC11-202ENST00000357207 UBAC1Q9BSL1 405 aa18.21■□□□□ 0.51
TRAPPC11-202ENST00000357207 RRAGDQ9NQL2 400 aaPredicted RBP18.21■□□□□ 0.51
TRAPPC11-202ENST00000357207 GOLGA6L10A6NI86 522 aa18.21■□□□□ 0.51
TRAPPC11-202ENST00000357207 CALCOCO1Q9P1Z2 691 aa18.21■□□□□ 0.51
TRAPPC11-202ENST00000357207 WASLO00401 505 aaPredicted RBP18.2■□□□□ 0.5
TRAPPC11-202ENST00000357207 STX1AQ16623 288 aa18.2■□□□□ 0.5
TRAPPC11-202ENST00000357207 PIK3C2GO75747 1445 aa18.2■□□□□ 0.5
TRAPPC11-202ENST00000357207 C16orf71Q8IYS4 520 aaPredicted RBP18.2■□□□□ 0.5
TRAPPC11-202ENST00000357207 MRPL50Q8N5N7 158 aaKnown RBP18.2■□□□□ 0.5
TRAPPC11-202ENST00000357207 TTC12Q9H892 705 aaPredicted RBP18.2■□□□□ 0.5
TRAPPC11-202ENST00000357207 GNL3LQ9NVN8 582 aaKnown RBP18.2■□□□□ 0.5
TRAPPC11-202ENST00000357207 PAXBP1Q9Y5B6 917 aa18.2■□□□□ 0.5
TRAPPC11-202ENST00000357207 BICRAQ9NZM4 1560 aa18.2■□□□□ 0.5
TRAPPC11-202ENST00000357207 IDH1O75874 414 aaKnown RBP18.2■□□□□ 0.5
TRAPPC11-202ENST00000357207 KIF4BQ2VIQ3 1234 aa18.2■□□□□ 0.5
TRAPPC11-202ENST00000357207 DBF4Q9UBU7 674 aaPredicted RBP18.2■□□□□ 0.5
TRAPPC11-202ENST00000357207 TDO2P48775 406 aa18.19■□□□□ 0.5
TRAPPC11-202ENST00000357207 IQCEQ6IPM2 695 aa18.19■□□□□ 0.5
TRAPPC11-202ENST00000357207 TXLNBQ8N3L3 684 aa18.19■□□□□ 0.5
TRAPPC11-202ENST00000357207 CNPY2Q9Y2B0 182 aa18.19■□□□□ 0.5
TRAPPC11-202ENST00000357207 FAM200AQ8TCP9 573 aa18.19■□□□□ 0.5
TRAPPC11-202ENST00000357207 DCTPP1Q9H773 170 aa18.19■□□□□ 0.5
TRAPPC11-202ENST00000357207 FAM193AP78312 1265 aa18.19■□□□□ 0.5
TRAPPC11-202ENST00000357207 HSP90AB2PQ58FF8 381 aa18.18■□□□□ 0.5
TRAPPC11-202ENST00000357207 RHPN1Q8TCX5 695 aa18.18■□□□□ 0.5
TRAPPC11-202ENST00000357207 CCDC186Q7Z3E2 898 aa18.18■□□□□ 0.5
TRAPPC11-202ENST00000357207 CRACR2AQ9BSW2 395 aa18.18■□□□□ 0.5
TRAPPC11-202ENST00000357207 POLR3GO15318 223 aaPredicted RBP18.18■□□□□ 0.5
TRAPPC11-202ENST00000357207 KIF5CO60282 957 aa18.18■□□□□ 0.5
TRAPPC11-202ENST00000357207 IFIT1P09914 478 aaKnown RBP18.18■□□□□ 0.5
TRAPPC11-202ENST00000357207 FBLN1P23142 703 aa18.18■□□□□ 0.5
TRAPPC11-202ENST00000357207 EIF5P55010 431 aaKnown RBP18.18■□□□□ 0.5
TRAPPC11-202ENST00000357207 CCT2P78371 535 aaKnown RBP18.18■□□□□ 0.5
TRAPPC11-202ENST00000357207 TMC6Q7Z403 805 aa18.18■□□□□ 0.5
TRAPPC11-202ENST00000357207 MPHOSPH8Q99549 860 aa18.18■□□□□ 0.5
TRAPPC11-202ENST00000357207 CEP131Q9UPN4 1083 aa18.18■□□□□ 0.5
TRAPPC11-202ENST00000357207 C8orf58Q8NAV2 365 aa18.18■□□□□ 0.5
TRAPPC11-202ENST00000357207 SNW1Q13573 536 aaKnown RBP18.17■□□□□ 0.5
TRAPPC11-202ENST00000357207 CEP135Q66GS9 1140 aa18.17■□□□□ 0.5
TRAPPC11-202ENST00000357207 GRIN2AQ12879 1464 aa18.17■□□□□ 0.5
TRAPPC11-202ENST00000357207 BIN1O00499 593 aa18.17■□□□□ 0.5
TRAPPC11-202ENST00000357207 JAKMIP3Q5VZ66 844 aa18.17■□□□□ 0.5
TRAPPC11-202ENST00000357207 ZGPATQ8N5A5 531 aaKnown RBP18.17■□□□□ 0.5
TRAPPC11-202ENST00000357207 ODF2Q5BJF6 829 aa18.17■□□□□ 0.5
TRAPPC11-202ENST00000357207 KLHL10Q6JEL2 608 aa18.17■□□□□ 0.5
TRAPPC11-202ENST00000357207 KIAA1328Q86T90 577 aa18.17■□□□□ 0.5
TRAPPC11-202ENST00000357207 KRT18P05783 430 aaKnown RBP18.16■□□□□ 0.5
TRAPPC11-202ENST00000357207 CASQ1P31415 396 aa18.16■□□□□ 0.5
TRAPPC11-202ENST00000357207 USP8P40818 1118 aa18.16■□□□□ 0.5
TRAPPC11-202ENST00000357207 NECAB1Q8N987 351 aa18.16■□□□□ 0.5
TRAPPC11-202ENST00000357207 ERLIN2O94905 339 aa18.16■□□□□ 0.5
TRAPPC11-202ENST00000357207 BMS1Q14692 1282 aaKnown RBP18.16■□□□□ 0.5
TRAPPC11-202ENST00000357207 PROSER2Q86WR7 435 aaPredicted RBP18.16■□□□□ 0.5
TRAPPC11-202ENST00000357207 CCDC148Q8NFR7 591 aa18.16■□□□□ 0.5
TRAPPC11-202ENST00000357207 VAMP4O75379 141 aa18.16■□□□□ 0.5
TRAPPC11-202ENST00000357207 RBM25P49756 843 aaKnown RBP18.16■□□□□ 0.5
TRAPPC11-202ENST00000357207 AIDAQ96BJ3 306 aa18.16■□□□□ 0.5
TRAPPC11-202ENST00000357207 CCDC85AQ96PX6 553 aaPredicted RBP18.16■□□□□ 0.5
TRAPPC11-202ENST00000357207 TANGO6Q9C0B7 1094 aa18.16■□□□□ 0.5
TRAPPC11-202ENST00000357207 PI4KAP2A4QPH2 592 aa18.15■□□□□ 0.5
TRAPPC11-202ENST00000357207 PI4KAP1Q8N8J0 262 aa18.15■□□□□ 0.5
TRAPPC11-202ENST00000357207 NEK1Q96PY6 1258 aa18.15■□□□□ 0.5
TRAPPC11-202ENST00000357207 MYD88Q99836 296 aa18.15■□□□□ 0.5
TRAPPC11-202ENST00000357207 CARD14Q9BXL6 1004 aa18.15■□□□□ 0.5
TRAPPC11-202ENST00000357207 ZSCAN16Q9H4T2 348 aaPredicted RBP18.15■□□□□ 0.5
TRAPPC11-202ENST00000357207 CTDP1Q9Y5B0 961 aaPredicted RBP18.15■□□□□ 0.5
TRAPPC11-202ENST00000357207 CENPHQ9H3R5 247 aa18.15■□□□□ 0.5
TRAPPC11-202ENST00000357207 HMG20BQ9P0W2 317 aa18.15■□□□□ 0.5
TRAPPC11-202ENST00000357207 TTC21BQ7Z4L5 1316 aa18.14■□□□□ 0.5
TRAPPC11-202ENST00000357207 ZFYVE27Q5T4F4 411 aa18.14■□□□□ 0.5
TRAPPC11-202ENST00000357207 PLEKHM2Q8IWE5 1019 aa18.14■□□□□ 0.5
TRAPPC11-202ENST00000357207 KCNH5Q8NCM2 988 aa18.14■□□□□ 0.5
TRAPPC11-202ENST00000357207 AKAP2Q9Y2D5 859 aa18.14■□□□□ 0.5
TRAPPC11-202ENST00000357207 MAPK8IP2Q13387 824 aaPredicted RBP18.14■□□□□ 0.49
TRAPPC11-202ENST00000357207 CNNM3Q8NE01 707 aa18.14■□□□□ 0.49
TRAPPC11-202ENST00000357207 TCOF1Q13428 1488 aaKnown RBP18.14■□□□□ 0.49
TRAPPC11-202ENST00000357207 CCDC171Q6TFL3 1326 aa18.14■□□□□ 0.49
TRAPPC11-202ENST00000357207 USHBP1Q8N6Y0 703 aa18.14■□□□□ 0.49
TRAPPC11-202ENST00000357207 F13A1P00488 732 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms