RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 DOT1LQ8TEK3 1739 aa25.94■■□□□ 1.74
TRIM4-202ENST00000354241 KCPQ6ZWJ8 1503 aa25.94■■□□□ 1.74
TRIM4-202ENST00000354241 CCT4P50991 539 aaKnown RBP25.94■■□□□ 1.74
TRIM4-202ENST00000354241 FAM98CQ17RN3 349 aaKnown RBP25.94■■□□□ 1.74
TRIM4-202ENST00000354241 PROSER3Q2NL68 480 aa25.93■■□□□ 1.74
TRIM4-202ENST00000354241 RWDD1Q9H446 243 aaPredicted RBP25.93■■□□□ 1.74
TRIM4-202ENST00000354241 N4BP2Q86UW6 1770 aaPredicted RBP25.92■■□□□ 1.74
TRIM4-202ENST00000354241 PIGBQ92521 554 aa25.92■■□□□ 1.74
TRIM4-202ENST00000354241 USP16Q9Y5T5 823 aa25.92■■□□□ 1.74
TRIM4-202ENST00000354241 C1orf115Q9H7X2 142 aa25.92■■□□□ 1.74
TRIM4-202ENST00000354241 DDX21Q9NR30 783 aaKnown RBP eCLIP25.92■■□□□ 1.74
TRIM4-202ENST00000354241 HYPKQ9NX55 129 aa25.91■■□□□ 1.74
TRIM4-202ENST00000354241 PTCD1O75127 700 aaKnown RBP25.9■■□□□ 1.74
TRIM4-202ENST00000354241 PXDNLA1KZ92 1463 aa25.9■■□□□ 1.74
TRIM4-202ENST00000354241 SYTL4Q96C24 671 aaPredicted RBP25.9■■□□□ 1.74
TRIM4-202ENST00000354241 PDIA6Q15084 440 aa25.89■■□□□ 1.74
TRIM4-202ENST00000354241 MARCH10Q8NA82 808 aaPredicted RBP25.89■■□□□ 1.74
TRIM4-202ENST00000354241 AFF2P51816 1311 aa25.89■■□□□ 1.73
TRIM4-202ENST00000354241 BCL9O00512 1426 aa25.88■■□□□ 1.73
TRIM4-202ENST00000354241 MYL6BP14649 208 aa25.88■■□□□ 1.73
TRIM4-202ENST00000354241 ASAP1Q9ULH1 1129 aa25.88■■□□□ 1.73
TRIM4-202ENST00000354241 A0A0G2JS52 829 aa25.87■■□□□ 1.73
TRIM4-202ENST00000354241 MYT1Q01538 1121 aa25.87■■□□□ 1.73
TRIM4-202ENST00000354241 HDAC1Q13547 482 aaPredicted RBP25.87■■□□□ 1.73
TRIM4-202ENST00000354241 PI4KAP2A4QPH2 592 aa25.86■■□□□ 1.73
TRIM4-202ENST00000354241 SKAP1Q86WV1 359 aa25.86■■□□□ 1.73
TRIM4-202ENST00000354241 PI4KAP1Q8N8J0 262 aa25.86■■□□□ 1.73
TRIM4-202ENST00000354241 MEIS3Q99687 375 aa25.86■■□□□ 1.73
TRIM4-202ENST00000354241 PRIM1P49642 420 aaKnown RBP25.86■■□□□ 1.73
TRIM4-202ENST00000354241 ATG3Q9NT62 314 aa25.86■■□□□ 1.73
TRIM4-202ENST00000354241 AIMP1Q12904 312 aaKnown RBP25.85■■□□□ 1.73
TRIM4-202ENST00000354241 DNAAF4Q8WXU2 420 aa25.85■■□□□ 1.73
TRIM4-202ENST00000354241 ADCY9O60503 1353 aa25.84■■□□□ 1.73
TRIM4-202ENST00000354241 PIP4K2AP48426 406 aaPredicted RBP25.84■■□□□ 1.73
TRIM4-202ENST00000354241 ACSBG1Q96GR2 724 aa25.84■■□□□ 1.73
TRIM4-202ENST00000354241 DDX58O95786 925 aaKnown RBP25.82■■□□□ 1.72
TRIM4-202ENST00000354241 RBM42Q9BTD8 480 aaKnown RBP25.82■■□□□ 1.72
TRIM4-202ENST00000354241 KSR2Q6VAB6 950 aa25.82■■□□□ 1.72
TRIM4-202ENST00000354241 MAP3K2Q9Y2U5 619 aa25.82■■□□□ 1.72
TRIM4-202ENST00000354241 THSD7AQ9UPZ6 1657 aa25.81■■□□□ 1.72
TRIM4-202ENST00000354241 SRCIN1Q9C0H9 1055 aa25.81■■□□□ 1.72
TRIM4-202ENST00000354241 XAGE3Q8WTP9 111 aa25.8■■□□□ 1.72
TRIM4-202ENST00000354241 GJD4Q96KN9 370 aaPredicted RBP25.8■■□□□ 1.72
TRIM4-202ENST00000354241 ERBB4Q15303 1308 aa25.8■■□□□ 1.72
TRIM4-202ENST00000354241 BEND3Q5T5X7 828 aa25.79■■□□□ 1.72
TRIM4-202ENST00000354241 COPS6Q7L5N1 327 aa25.79■■□□□ 1.72
TRIM4-202ENST00000354241 ATRNO75882 1429 aa25.78■■□□□ 1.72
TRIM4-202ENST00000354241 LRP10Q7Z4F1 713 aa25.78■■□□□ 1.72
TRIM4-202ENST00000354241 VSIG10Q8N0Z9 540 aa25.78■■□□□ 1.72
TRIM4-202ENST00000354241 ATP10DQ9P241 1426 aa25.78■■□□□ 1.72
TRIM4-202ENST00000354241 TRPC5Q9UL62 973 aaPredicted RBP25.78■■□□□ 1.72
TRIM4-202ENST00000354241 GNAI3P08754 354 aa25.78■■□□□ 1.72
TRIM4-202ENST00000354241 A1BGP04217 495 aa25.77■■□□□ 1.72
TRIM4-202ENST00000354241 RIC3Q7Z5B4 369 aa25.77■■□□□ 1.72
TRIM4-202ENST00000354241 SIRT2Q8IXJ6 389 aa25.77■■□□□ 1.72
TRIM4-202ENST00000354241 TEX13AQ9BXU3 409 aaPredicted RBP25.76■■□□□ 1.72
TRIM4-202ENST00000354241 TSHZ2Q9NRE2 1034 aa25.76■■□□□ 1.72
TRIM4-202ENST00000354241 NBPF26B4DH59 902 aa25.76■■□□□ 1.71
TRIM4-202ENST00000354241 RGS3P49796 1198 aa25.76■■□□□ 1.71
TRIM4-202ENST00000354241 NBPF14Q5TI25 921 aa25.76■■□□□ 1.71
TRIM4-202ENST00000354241 NBPF10Q6P3W6 841 aaKnown RBP25.76■■□□□ 1.71
TRIM4-202ENST00000354241 DNAJC10Q8IXB1 793 aa25.76■■□□□ 1.71
TRIM4-202ENST00000354241 NBPF15Q8N660 670 aa25.76■■□□□ 1.71
TRIM4-202ENST00000354241 PDZRN3Q9UPQ7 1066 aa25.76■■□□□ 1.71
TRIM4-202ENST00000354241 GNAI2P04899 355 aa25.75■■□□□ 1.71
TRIM4-202ENST00000354241 CEP85Q6P2H3 762 aa25.75■■□□□ 1.71
TRIM4-202ENST00000354241 RPAP2Q8IXW5 612 aaPredicted RBP25.75■■□□□ 1.71
TRIM4-202ENST00000354241 SMC5Q8IY18 1101 aa25.75■■□□□ 1.71
TRIM4-202ENST00000354241 ANKRD44Q8N8A2 993 aa25.75■■□□□ 1.71
TRIM4-202ENST00000354241 USP44Q9H0E7 712 aa25.75■■□□□ 1.71
TRIM4-202ENST00000354241 UBTFL1P0CB47 393 aaPredicted RBP25.73■■□□□ 1.71
TRIM4-202ENST00000354241 ARFGEF2Q9Y6D5 1785 aa25.73■■□□□ 1.71
TRIM4-202ENST00000354241 ANKRD13DQ6ZTN6 518 aa25.73■■□□□ 1.71
TRIM4-202ENST00000354241 STARD3NLO95772 234 aa25.72■■□□□ 1.71
TRIM4-202ENST00000354241 SLC4A9Q96Q91 983 aa25.72■■□□□ 1.71
TRIM4-202ENST00000354241 TJP1Q07157 1748 aa25.72■■□□□ 1.71
TRIM4-202ENST00000354241 KCNQ2O43526 872 aa25.71■■□□□ 1.71
TRIM4-202ENST00000354241 ALDH1L1O75891 902 aa25.71■■□□□ 1.71
TRIM4-202ENST00000354241 QTRT2Q9H974 415 aaKnown RBP25.71■■□□□ 1.71
TRIM4-202ENST00000354241 LINS1Q8NG48 757 aa25.71■■□□□ 1.71
TRIM4-202ENST00000354241 NEXNQ0ZGT2 675 aa25.7■■□□□ 1.7
TRIM4-202ENST00000354241 CWF19L2Q2TBE0 894 aaKnown RBP25.7■■□□□ 1.7
TRIM4-202ENST00000354241 GCC1Q96CN9 775 aa25.7■■□□□ 1.7
TRIM4-202ENST00000354241 LRRFIP2Q9Y608 721 aaKnown RBP25.7■■□□□ 1.7
TRIM4-202ENST00000354241 METTL22Q9BUU2 404 aaPredicted RBP25.69■■□□□ 1.7
TRIM4-202ENST00000354241 MYD88Q99836 296 aa25.69■■□□□ 1.7
TRIM4-202ENST00000354241 AFDNP55196 1824 aaKnown RBP25.68■■□□□ 1.7
TRIM4-202ENST00000354241 PLBD2Q8NHP8 589 aa25.68■■□□□ 1.7
TRIM4-202ENST00000354241 NBPF7P0C2Y1 421 aaPredicted RBP25.67■■□□□ 1.7
TRIM4-202ENST00000354241 TTLL7Q6ZT98 887 aa25.67■■□□□ 1.7
TRIM4-202ENST00000354241 C9orf78Q9NZ63 289 aaPredicted RBP25.67■■□□□ 1.7
TRIM4-202ENST00000354241 NUP188Q5SRE5 1749 aa25.67■■□□□ 1.7
TRIM4-202ENST00000354241 ONECUT3O60422 494 aaPredicted RBP25.67■■□□□ 1.7
TRIM4-202ENST00000354241 HMMRO75330 724 aa25.67■■□□□ 1.7
TRIM4-202ENST00000354241 SEPT12Q8IYM1 358 aa25.67■■□□□ 1.7
TRIM4-202ENST00000354241 ZNF330Q9Y3S2 320 aaPredicted RBP25.67■■□□□ 1.7
TRIM4-202ENST00000354241 PALLDQ8WX93 1383 aa25.66■■□□□ 1.7
TRIM4-202ENST00000354241 CYP19A1P11511 503 aaPredicted RBP25.66■■□□□ 1.7
TRIM4-202ENST00000354241 FAM182BQ5T319 152 aa25.66■■□□□ 1.7
TRIM4-202ENST00000354241 IGKV5-2P06315 115 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms