RNA–Protein interactions for RNA: ENST00000349241.6

PTK7-204, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 1 (best) BASIC

Gene PTK7, Length 3,801 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-204ENST00000349241 TMX3Q96JJ7 454 aa15.76■□□□□ 0.11
PTK7-204ENST00000349241 PALD1Q9ULE6 856 aa15.76■□□□□ 0.11
PTK7-204ENST00000349241 NLRP1Q9C000 1473 aa15.76■□□□□ 0.11
PTK7-204ENST00000349241 GOLGA6L4A6NEF3 574 aa15.76■□□□□ 0.11
PTK7-204ENST00000349241 PRPF40BQ6NWY9 871 aaKnown RBP15.76■□□□□ 0.11
PTK7-204ENST00000349241 CHMP4AQ9BY43 222 aa15.76■□□□□ 0.11
PTK7-204ENST00000349241 CIZ1Q9ULV3 898 aaPredicted RBP15.76■□□□□ 0.11
PTK7-204ENST00000349241 PLEKHG1Q9ULL1 1385 aa15.75■□□□□ 0.11
PTK7-204ENST00000349241 BRPF1P55201 1214 aaPredicted RBP15.75■□□□□ 0.11
PTK7-204ENST00000349241 TOM1L2Q6ZVM7 507 aa15.75■□□□□ 0.11
PTK7-204ENST00000349241 SMC3Q9UQE7 1217 aa15.75■□□□□ 0.11
PTK7-204ENST00000349241 MAP2P11137 1827 aaKnown RBP15.75■□□□□ 0.11
PTK7-204ENST00000349241 JAKMIP1Q96N16 626 aaKnown RBP15.75■□□□□ 0.11
PTK7-204ENST00000349241 CASTP20810 708 aaKnown RBP15.75■□□□□ 0.11
PTK7-204ENST00000349241 CABP4P57796 275 aa15.75■□□□□ 0.11
PTK7-204ENST00000349241 NDUFB9Q9Y6M9 179 aa15.75■□□□□ 0.11
PTK7-204ENST00000349241 IGSF1Q8N6C5 1336 aa15.75■□□□□ 0.11
PTK7-204ENST00000349241 FAM177BA6PVY3 158 aa15.74■□□□□ 0.11
PTK7-204ENST00000349241 RAB3GAP1Q15042 981 aa15.74■□□□□ 0.11
PTK7-204ENST00000349241 HSP90AB4PQ58FF6 505 aa15.74■□□□□ 0.11
PTK7-204ENST00000349241 TAF7LQ5H9L4 462 aa15.74■□□□□ 0.11
PTK7-204ENST00000349241 SYCE3A1L190 88 aa15.74■□□□□ 0.11
PTK7-204ENST00000349241 ZKSCAN1P17029 563 aaPredicted RBP15.74■□□□□ 0.11
PTK7-204ENST00000349241 RIMBP3CA6NJZ7 1639 aa15.74■□□□□ 0.11
PTK7-204ENST00000349241 RIMBP3BA6NNM3 1639 aa15.74■□□□□ 0.11
PTK7-204ENST00000349241 RIMBP3Q9UFD9 1639 aa15.74■□□□□ 0.11
PTK7-204ENST00000349241 CHMLP26374 656 aa15.74■□□□□ 0.11
PTK7-204ENST00000349241 FERMT3Q86UX7 667 aa15.74■□□□□ 0.11
PTK7-204ENST00000349241 PRDM11Q9NQV5 511 aa15.74■□□□□ 0.11
PTK7-204ENST00000349241 COPS6Q7L5N1 327 aa15.73■□□□□ 0.11
PTK7-204ENST00000349241 RUFY2Q8WXA3 655 aa15.73■□□□□ 0.11
PTK7-204ENST00000349241 KDM4AO75164 1064 aa15.73■□□□□ 0.11
PTK7-204ENST00000349241 EIF4A1P60842 406 aaKnown RBP15.73■□□□□ 0.11
PTK7-204ENST00000349241 XAGE3Q8WTP9 111 aa15.73■□□□□ 0.11
PTK7-204ENST00000349241 IFT172Q9UG01 1749 aa15.72■□□□□ 0.11
PTK7-204ENST00000349241 PTCH1Q13635 1447 aa15.72■□□□□ 0.11
PTK7-204ENST00000349241 UBE3BQ7Z3V4 1068 aa15.72■□□□□ 0.11
PTK7-204ENST00000349241 CCDC83Q8IWF9 413 aa15.72■□□□□ 0.11
PTK7-204ENST00000349241 KIF2CQ99661 725 aa15.72■□□□□ 0.11
PTK7-204ENST00000349241 ADAMTS13Q76LX8 1427 aa15.72■□□□□ 0.11
PTK7-204ENST00000349241 NEURL4Q96JN8 1562 aa15.72■□□□□ 0.11
PTK7-204ENST00000349241 KIAA0232Q92628 1395 aa15.72■□□□□ 0.11
PTK7-204ENST00000349241 SOS1Q07889 1333 aaPredicted RBP15.72■□□□□ 0.11
PTK7-204ENST00000349241 PTMSP20962 102 aa15.72■□□□□ 0.11
PTK7-204ENST00000349241 RNMTO43148 476 aaKnown RBP15.71■□□□□ 0.11
PTK7-204ENST00000349241 AKAP4Q5JQC9 854 aa15.71■□□□□ 0.11
PTK7-204ENST00000349241 MED14O60244 1454 aa15.71■□□□□ 0.11
PTK7-204ENST00000349241 PTPRUQ92729 1446 aa15.71■□□□□ 0.11
PTK7-204ENST00000349241 ARHGEF10O15013 1369 aa15.71■□□□□ 0.11
PTK7-204ENST00000349241 HDAC5Q9UQL6 1122 aa15.71■□□□□ 0.11
PTK7-204ENST00000349241 AMOTQ4VCS5 1084 aa15.71■□□□□ 0.1
PTK7-204ENST00000349241 ZBTB3Q9H5J0 574 aa15.71■□□□□ 0.1
PTK7-204ENST00000349241 RICTORQ6R327 1708 aa15.71■□□□□ 0.1
PTK7-204ENST00000349241 GAS2L3Q86XJ1 694 aa15.7■□□□□ 0.1
PTK7-204ENST00000349241 NECAB1Q8N987 351 aa15.69■□□□□ 0.1
PTK7-204ENST00000349241 AXIN2Q9Y2T1 843 aa15.69■□□□□ 0.1
PTK7-204ENST00000349241 HTATSF1O43719 755 aaKnown RBP15.69■□□□□ 0.1
PTK7-204ENST00000349241 CEBPZQ03701 1054 aaKnown RBP15.69■□□□□ 0.1
PTK7-204ENST00000349241 EDC3Q96F86 508 aaKnown RBP15.69■□□□□ 0.1
PTK7-204ENST00000349241 CWC22Q9HCG8 908 aaKnown RBP15.69■□□□□ 0.1
PTK7-204ENST00000349241 GLRX3O76003 335 aaKnown RBP15.68■□□□□ 0.1
PTK7-204ENST00000349241 A0A087WZG4 1122 aa15.68■□□□□ 0.1
PTK7-204ENST00000349241 BICC1Q9H694 974 aaKnown RBP15.68■□□□□ 0.1
PTK7-204ENST00000349241 DIP2BQ9P265 1576 aa15.68■□□□□ 0.1
PTK7-204ENST00000349241 RAB11FIP3O75154 756 aa15.67■□□□□ 0.1
PTK7-204ENST00000349241 FBXW7Q969H0 707 aa15.67■□□□□ 0.1
PTK7-204ENST00000349241 RRAGDQ9NQL2 400 aaPredicted RBP15.67■□□□□ 0.1
PTK7-204ENST00000349241 ECHDC1Q9NTX5 307 aa15.67■□□□□ 0.1
PTK7-204ENST00000349241 KSR2Q6VAB6 950 aa15.67■□□□□ 0.1
PTK7-204ENST00000349241 FAM43AQ8N2R8 423 aa15.67■□□□□ 0.1
PTK7-204ENST00000349241 PDRG1Q9NUG6 133 aa15.66■□□□□ 0.1
PTK7-204ENST00000349241 GRM8O00222 908 aa15.66■□□□□ 0.1
PTK7-204ENST00000349241 CYP46A1Q9Y6A2 500 aa15.66■□□□□ 0.1
PTK7-204ENST00000349241 SYAP1Q96A49 352 aaPredicted RBP15.65■□□□□ 0.1
PTK7-204ENST00000349241 LRRC2Q9BYS8 371 aa15.65■□□□□ 0.1
PTK7-204ENST00000349241 DDX11Q96FC9 970 aa15.65■□□□□ 0.1
PTK7-204ENST00000349241 ZNF496Q96IT1 587 aaPredicted RBP15.65■□□□□ 0.1
PTK7-204ENST00000349241 HYPKQ9NX55 129 aa15.65■□□□□ 0.1
PTK7-204ENST00000349241 LARP1Q6PKG0 1096 aaKnown RBP15.65■□□□□ 0.1
PTK7-204ENST00000349241 SUCLG2Q96I99 432 aa15.65■□□□□ 0.1
PTK7-204ENST00000349241 USP16Q9Y5T5 823 aa15.65■□□□□ 0.1
PTK7-204ENST00000349241 ANKRD13DQ6ZTN6 518 aa15.64■□□□□ 0.09
PTK7-204ENST00000349241 DDX46Q7L014 1031 aaKnown RBP15.64■□□□□ 0.09
PTK7-204ENST00000349241 MCM2P49736 904 aa15.64■□□□□ 0.09
PTK7-204ENST00000349241 CRB1P82279 1406 aa15.64■□□□□ 0.09
PTK7-204ENST00000349241 FKBP4Q02790 459 aaKnown RBP eCLIP15.64■□□□□ 0.09
PTK7-204ENST00000349241 FAM227BQ96M60 508 aa15.64■□□□□ 0.09
PTK7-204ENST00000349241 SNRKQ9NRH2 765 aa15.64■□□□□ 0.09
PTK7-204ENST00000349241 ESPNB1AK53 854 aa15.64■□□□□ 0.09
PTK7-204ENST00000349241 H3BQV1 296 aa15.64■□□□□ 0.09
PTK7-204ENST00000349241 GIGYF1O75420 1035 aaPredicted RBP15.64■□□□□ 0.09
PTK7-204ENST00000349241 WASHC4Q2M389 1173 aa15.64■□□□□ 0.09
PTK7-204ENST00000349241 BEND3Q5T5X7 828 aa15.64■□□□□ 0.09
PTK7-204ENST00000349241 IFFO2Q5TF58 517 aa15.64■□□□□ 0.09
PTK7-204ENST00000349241 ZSCAN23Q3MJ62 389 aa15.63■□□□□ 0.09
PTK7-204ENST00000349241 ERC1Q8IUD2 1116 aa15.63■□□□□ 0.09
PTK7-204ENST00000349241 DRC7Q8IY82 874 aa15.63■□□□□ 0.09
PTK7-204ENST00000349241 OVOS2A0A0J9YW53 1432 aa15.63■□□□□ 0.09
PTK7-204ENST00000349241 OVOS2Q6IE36 1432 aa15.63■□□□□ 0.09
PTK7-204ENST00000349241 PRIM1P49642 420 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms